RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 VPS72Q15906 364 aa17.48■□□□□ 0.39
RFX4-206ENST00000539967 MEGF6O75095 1541 aa17.47■□□□□ 0.39
RFX4-206ENST00000539967 FAM98CQ17RN3 349 aaKnown RBP17.47■□□□□ 0.39
RFX4-206ENST00000539967 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
RFX4-206ENST00000539967 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
RFX4-206ENST00000539967 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
RFX4-206ENST00000539967 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
RFX4-206ENST00000539967 BRWD3Q6RI45 1802 aa17.45■□□□□ 0.38
RFX4-206ENST00000539967 GJD4Q96KN9 370 aaPredicted RBP17.45■□□□□ 0.38
RFX4-206ENST00000539967 TRPC5Q9UL62 973 aaPredicted RBP17.45■□□□□ 0.38
RFX4-206ENST00000539967 PRKAR2BP31323 418 aa17.44■□□□□ 0.38
RFX4-206ENST00000539967 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
RFX4-206ENST00000539967 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
RFX4-206ENST00000539967 KAT6BQ8WYB5 2073 aa17.43■□□□□ 0.38
RFX4-206ENST00000539967 WDR43Q15061 677 aaKnown RBP eCLIP17.43■□□□□ 0.38
RFX4-206ENST00000539967 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
RFX4-206ENST00000539967 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
RFX4-206ENST00000539967 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
RFX4-206ENST00000539967 DLG5Q8TDM6 1919 aa17.43■□□□□ 0.38
RFX4-206ENST00000539967 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
RFX4-206ENST00000539967 PLEKHF1Q96S99 279 aa17.42■□□□□ 0.38
RFX4-206ENST00000539967 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
RFX4-206ENST00000539967 DSG3P32926 999 aa17.41■□□□□ 0.38
RFX4-206ENST00000539967 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
RFX4-206ENST00000539967 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
RFX4-206ENST00000539967 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
RFX4-206ENST00000539967 KDRP35968 1356 aa17.4■□□□□ 0.38
RFX4-206ENST00000539967 A0A0G2JS52 829 aa17.39■□□□□ 0.37
RFX4-206ENST00000539967 IL2RBP14784 551 aa17.39■□□□□ 0.37
RFX4-206ENST00000539967 MYT1Q01538 1121 aa17.39■□□□□ 0.37
RFX4-206ENST00000539967 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
RFX4-206ENST00000539967 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
RFX4-206ENST00000539967 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
RFX4-206ENST00000539967 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
RFX4-206ENST00000539967 THSD7AQ9UPZ6 1657 aa17.38■□□□□ 0.37
RFX4-206ENST00000539967 TATP17735 454 aaPredicted RBP17.37■□□□□ 0.37
RFX4-206ENST00000539967 SEPT12Q8IYM1 358 aa17.37■□□□□ 0.37
RFX4-206ENST00000539967 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
RFX4-206ENST00000539967 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
RFX4-206ENST00000539967 APAF1O14727 1248 aa17.36■□□□□ 0.37
RFX4-206ENST00000539967 FCHSD2O94868 740 aa17.36■□□□□ 0.37
RFX4-206ENST00000539967 RXRBP28702 533 aa17.36■□□□□ 0.37
RFX4-206ENST00000539967 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
RFX4-206ENST00000539967 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
RFX4-206ENST00000539967 BARGINQ6ZT62 677 aa17.36■□□□□ 0.37
RFX4-206ENST00000539967 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
RFX4-206ENST00000539967 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
RFX4-206ENST00000539967 CYP27B1O15528 508 aa17.35■□□□□ 0.37
RFX4-206ENST00000539967 RGS12O14924 1447 aa17.34■□□□□ 0.37
RFX4-206ENST00000539967 MARCH10Q8NA82 808 aaPredicted RBP17.34■□□□□ 0.37
RFX4-206ENST00000539967 ONECUT3O60422 494 aaPredicted RBP17.33■□□□□ 0.36
RFX4-206ENST00000539967 DCTN1Q14203 1278 aa17.33■□□□□ 0.36
RFX4-206ENST00000539967 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.36
RFX4-206ENST00000539967 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.36
RFX4-206ENST00000539967 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
RFX4-206ENST00000539967 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
RFX4-206ENST00000539967 THRAP3Q9Y2W1 955 aaKnown RBP17.33■□□□□ 0.36
RFX4-206ENST00000539967 EXOC5O00471 708 aa17.31■□□□□ 0.36
RFX4-206ENST00000539967 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
RFX4-206ENST00000539967 DDB1Q16531 1140 aa17.31■□□□□ 0.36
RFX4-206ENST00000539967 PTF1AQ7RTS3 328 aa17.31■□□□□ 0.36
RFX4-206ENST00000539967 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
RFX4-206ENST00000539967 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
RFX4-206ENST00000539967 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
RFX4-206ENST00000539967 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
RFX4-206ENST00000539967 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
RFX4-206ENST00000539967 TOGARAM1Q9Y4F4 1720 aa17.3■□□□□ 0.36
RFX4-206ENST00000539967 MCM10Q7L590 875 aa17.29■□□□□ 0.36
RFX4-206ENST00000539967 TNS2Q63HR2 1409 aa17.29■□□□□ 0.36
RFX4-206ENST00000539967 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 PHKG2P15735 406 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 RIPK4P57078 832 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 NFE2L2Q16236 605 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 ACSBG1Q96GR2 724 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 TRIM35Q9UPQ4 493 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 ITGB4P16144 1822 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
RFX4-206ENST00000539967 SBF2Q86WG5 1849 aa17.27■□□□□ 0.36
RFX4-206ENST00000539967 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
RFX4-206ENST00000539967 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.35
RFX4-206ENST00000539967 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
RFX4-206ENST00000539967 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
RFX4-206ENST00000539967 KCNQ2O43526 872 aa17.25■□□□□ 0.35
RFX4-206ENST00000539967 PDE3BQ13370 1112 aa17.25■□□□□ 0.35
RFX4-206ENST00000539967 ILDR2Q71H61 639 aa17.25■□□□□ 0.35
RFX4-206ENST00000539967 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
RFX4-206ENST00000539967 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
RFX4-206ENST00000539967 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
RFX4-206ENST00000539967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.24■□□□□ 0.35
RFX4-206ENST00000539967 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
RFX4-206ENST00000539967 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 MIS18AQ9NYP9 233 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 MAP3K5Q99683 1374 aa17.23■□□□□ 0.35
RFX4-206ENST00000539967 GNAT3A8MTJ3 354 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms