RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TTC5Q8N0Z6 440 aa10.25□□□□□ -0.77
GNE-205ENST00000539815 NSD3Q9BZ95 1437 aa10.25□□□□□ -0.77
GNE-205ENST00000539815 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
GNE-205ENST00000539815 ZNF622Q969S3 477 aaKnown RBP eCLIP10.25□□□□□ -0.77
GNE-205ENST00000539815 SIN3AQ96ST3 1273 aa10.24□□□□□ -0.77
GNE-205ENST00000539815 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
GNE-205ENST00000539815 DALRD3Q5D0E6 543 aaKnown RBP10.24□□□□□ -0.77
GNE-205ENST00000539815 PCDH11XQ9BZA7 1347 aa10.24□□□□□ -0.77
GNE-205ENST00000539815 PCDH11YQ9BZA8 1340 aa10.24□□□□□ -0.77
GNE-205ENST00000539815 ZEB1P37275 1124 aaPredicted RBP10.23□□□□□ -0.77
GNE-205ENST00000539815 AXIN2Q9Y2T1 843 aa10.23□□□□□ -0.77
GNE-205ENST00000539815 TULP4Q9NRJ4 1543 aa10.23□□□□□ -0.77
GNE-205ENST00000539815 ERBB3P21860 1342 aa10.23□□□□□ -0.77
GNE-205ENST00000539815 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
GNE-205ENST00000539815 NLGN2Q8NFZ4 835 aa10.23□□□□□ -0.77
GNE-205ENST00000539815 PIM2Q9P1W9 311 aa10.23□□□□□ -0.77
GNE-205ENST00000539815 IFNL2Q8IZJ0 200 aa10.23□□□□□ -0.77
GNE-205ENST00000539815 CGNL1Q0VF96 1302 aa10.22□□□□□ -0.77
GNE-205ENST00000539815 BICDL1Q6ZP65 573 aa10.22□□□□□ -0.77
GNE-205ENST00000539815 GLI3P10071 1580 aa10.22□□□□□ -0.77
GNE-205ENST00000539815 DISP2A7MBM2 1401 aa10.22□□□□□ -0.77
GNE-205ENST00000539815 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
GNE-205ENST00000539815 PTF1AQ7RTS3 328 aa10.21□□□□□ -0.77
GNE-205ENST00000539815 USP19O94966 1318 aa10.21□□□□□ -0.78
GNE-205ENST00000539815 ZNF530Q6P9A1 599 aaPredicted RBP10.21□□□□□ -0.78
GNE-205ENST00000539815 COL23A1Q86Y22 540 aaPredicted RBP10.21□□□□□ -0.78
GNE-205ENST00000539815 ZNF827Q17R98 1081 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 NALCNQ8IZF0 1738 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 ST20-MTHFSA0A0A6YYL1 179 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 ZBTB22O15209 634 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 MTHFSP49914 203 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 PTGER2P43116 358 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 C9orf131Q5VYM1 1079 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 SMC1BQ8NDV3 1235 aa10.2□□□□□ -0.78
GNE-205ENST00000539815 ATP10DQ9P241 1426 aa10.19□□□□□ -0.78
GNE-205ENST00000539815 LOC102724428A0A0B4J2F2 783 aa10.19□□□□□ -0.78
GNE-205ENST00000539815 SIK1P57059 783 aa10.19□□□□□ -0.78
GNE-205ENST00000539815 TEFQ10587 303 aa10.19□□□□□ -0.78
GNE-205ENST00000539815 G3V3G9 751 aa10.19□□□□□ -0.78
GNE-205ENST00000539815 PDIA4P13667 645 aaKnown RBP10.19□□□□□ -0.78
GNE-205ENST00000539815 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
GNE-205ENST00000539815 VEGFAP15692 232 aaPredicted RBP10.19□□□□□ -0.78
GNE-205ENST00000539815 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
GNE-205ENST00000539815 PDE4CQ08493 712 aa10.18□□□□□ -0.78
GNE-205ENST00000539815 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
GNE-205ENST00000539815 KNSTRNQ9Y448 316 aa10.18□□□□□ -0.78
GNE-205ENST00000539815 H0YIN7 160 aa10.18□□□□□ -0.78
GNE-205ENST00000539815 PROM2Q8N271 834 aa10.18□□□□□ -0.78
GNE-205ENST00000539815 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
GNE-205ENST00000539815 SSFA2P28290 1259 aa10.18□□□□□ -0.78
GNE-205ENST00000539815 COL14A1Q05707 1796 aaKnown RBP10.18□□□□□ -0.78
GNE-205ENST00000539815 A0A0G2JLW4 131 aa10.17□□□□□ -0.78
GNE-205ENST00000539815 CPSF1Q10570 1443 aaKnown RBP10.17□□□□□ -0.78
GNE-205ENST00000539815 COL5A2P05997 1499 aaPredicted RBP10.16□□□□□ -0.78
GNE-205ENST00000539815 LMOD1P29536 600 aaPredicted RBP10.16□□□□□ -0.78
GNE-205ENST00000539815 HOXC9P31274 260 aa10.16□□□□□ -0.78
GNE-205ENST00000539815 ABT1Q9ULW3 272 aaKnown RBP10.16□□□□□ -0.78
GNE-205ENST00000539815 MAP3K19Q56UN5 1328 aa10.16□□□□□ -0.78
GNE-205ENST00000539815 A0A0U1RQG5 324 aaPredicted RBP10.15□□□□□ -0.78
GNE-205ENST00000539815 RRAGCQ9HB90 399 aa10.15□□□□□ -0.78
GNE-205ENST00000539815 PNPLA7Q6ZV29 1317 aa10.15□□□□□ -0.78
GNE-205ENST00000539815 STARD3NLO95772 234 aa10.15□□□□□ -0.78
GNE-205ENST00000539815 TGFB2P61812 414 aa10.15□□□□□ -0.78
GNE-205ENST00000539815 U2SURPO15042 1029 aaKnown RBP10.15□□□□□ -0.78
GNE-205ENST00000539815 JDP2Q8WYK2 163 aa10.15□□□□□ -0.78
GNE-205ENST00000539815 RTF1Q92541 710 aaKnown RBP10.15□□□□□ -0.78
GNE-205ENST00000539815 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
GNE-205ENST00000539815 NMRK2Q9NPI5 230 aa10.14□□□□□ -0.79
GNE-205ENST00000539815 LRRC4BQ9NT99 713 aa10.14□□□□□ -0.79
GNE-205ENST00000539815 TIMELESSQ9UNS1 1208 aa10.14□□□□□ -0.79
GNE-205ENST00000539815 DLC1Q96QB1 1528 aa10.14□□□□□ -0.79
GNE-205ENST00000539815 CANXP27824 592 aaKnown RBP10.14□□□□□ -0.79
GNE-205ENST00000539815 CCER1Q8TC90 406 aaPredicted RBP10.14□□□□□ -0.79
GNE-205ENST00000539815 AMOTQ4VCS5 1084 aa10.13□□□□□ -0.79
GNE-205ENST00000539815 CFAP53Q96M91 514 aa10.13□□□□□ -0.79
GNE-205ENST00000539815 ANKRD36BQ8N2N9 1353 aa10.13□□□□□ -0.79
GNE-205ENST00000539815 ERFEQ4G0M1 354 aa10.13□□□□□ -0.79
GNE-205ENST00000539815 A0A087WZG4 1122 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 IQCA1LA6NCM1 817 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 FAM177BA6PVY3 158 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 ST5P78524 1137 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 HSP90AB2PQ58FF8 381 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 YBX3P16989 372 aaKnown RBP eCLIP10.12□□□□□ -0.794e-6■□□□□ 11.2
GNE-205ENST00000539815 TTLL6Q8N841 843 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 MKRN1Q9UHC7 482 aaKnown RBP10.12□□□□□ -0.79
GNE-205ENST00000539815 DPEP1P16444 411 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 FSTL1Q12841 308 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 RGPD1P0DJD0 1748 aa10.12□□□□□ -0.79
GNE-205ENST00000539815 TNS2Q63HR2 1409 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 C2CD5Q86YS7 1000 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 RBM46Q8TBY0 533 aaKnown RBP10.11□□□□□ -0.79
GNE-205ENST00000539815 NUDCQ9Y266 331 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 PRAG1Q86YV5 1406 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 CCDC85CA6NKD9 419 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 NBPF6Q5VWK0 638 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 NBPF4Q96M43 638 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 ZNF652Q9Y2D9 606 aa10.11□□□□□ -0.79
GNE-205ENST00000539815 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms