RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SPATA24Q86W54 205 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 NF2P35240 595 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 CCDC158Q5M9N0 1113 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 SRRTQ9BXP5 876 aaKnown RBP8.09□□□□□ -1.11
SORT1-209ENST00000538502 ERBINQ96RT1 1412 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 RAB11FIP3O75154 756 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 FGFR1OPO95684 399 aaKnown RBP8.09□□□□□ -1.11
SORT1-209ENST00000538502 KLHL40Q2TBA0 621 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 SMAP1Q8IYB5 467 aaPredicted RBP8.09□□□□□ -1.11
SORT1-209ENST00000538502 NEUROD6Q96NK8 337 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 LRRFIP2Q9Y608 721 aaKnown RBP8.09□□□□□ -1.11
SORT1-209ENST00000538502 CCDC69A6NI79 296 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 SPECC1LQ69YQ0 1117 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 BCL11BQ9C0K0 894 aaPredicted RBP8.09□□□□□ -1.11
SORT1-209ENST00000538502 ABCC11Q96J66 1382 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 DESP17661 470 aa8.09□□□□□ -1.11
SORT1-209ENST00000538502 SMARCC1Q92922 1105 aaPredicted RBP8.09□□□□□ -1.11
SORT1-209ENST00000538502 C11orf95C9JLR9 678 aaPredicted RBP8.09□□□□□ -1.12
SORT1-209ENST00000538502 EHBP1Q8NDI1 1231 aa8.09□□□□□ -1.12
SORT1-209ENST00000538502 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.12
SORT1-209ENST00000538502 TDRD9Q8NDG6 1382 aaKnown RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 TOP1P11387 765 aaKnown RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 CFAP100Q494V2 611 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 TAX1BP1Q86VP1 789 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 DDX12PQ92771 950 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 CCDC94Q9BW85 323 aaPredicted RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 SUPT6HQ7KZ85 1726 aaKnown RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 USO1O60763 962 aaKnown RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 KRT18P05783 430 aaKnown RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 CETN2P41208 172 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 STX1AQ16623 288 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 SLFN5Q08AF3 891 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 ALDH1L2Q3SY69 923 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 DNAAF4Q8WXU2 420 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 PYM1Q9BRP8 204 aaKnown RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 BMP2KQ9NSY1 1161 aaPredicted RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 HMGB1P09429 215 aaKnown RBP8.08□□□□□ -1.12
SORT1-209ENST00000538502 PRDM10Q9NQV6 1147 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 STAMBPO95630 424 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
SORT1-209ENST00000538502 URI1O94763 535 aaPredicted RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 PAFAH1B1P43034 410 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 TTC39AQ5SRH9 613 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 RUSC2Q8N2Y8 1516 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 MINK1Q8N4C8 1332 aaPredicted RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 RBM25P49756 843 aaKnown RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 MTHFSP49914 203 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 XPCQ01831 940 aaPredicted RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 CKAP4Q07065 602 aaKnown RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 FAM177A1Q8N128 213 aaPredicted RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 FEZ1Q99689 392 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 SNW1Q13573 536 aaKnown RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 KIF4BQ2VIQ3 1234 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 FKBP15Q5T1M5 1219 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 TNPO1Q92973 898 aaKnown RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 TAOK3Q9H2K8 898 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 ANKRD62A6NC57 917 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 EIF5P55010 431 aaKnown RBP8.07□□□□□ -1.12
SORT1-209ENST00000538502 LRSAM1Q6UWE0 723 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 PRDM2Q13029 1718 aa8.07□□□□□ -1.12
SORT1-209ENST00000538502 BCAR3O75815 825 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 TUBBP07437 444 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 CCDC175P0C221 793 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 CEBPZQ03701 1054 aaKnown RBP8.06□□□□□ -1.12
SORT1-209ENST00000538502 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 ANKRD30BQ9BXX2 1392 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 WDR97A6NE52 1622 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 GPRASP1Q5JY77 1395 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 GTF2F1P35269 517 aaKnown RBP eCLIP8.06□□□□□ -1.121e-8■■□□□ 12.5
SORT1-209ENST00000538502 ALS2CR12Q96Q35 445 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 PPM1EQ8WY54 764 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 JAKMIP1Q96N16 626 aaKnown RBP8.06□□□□□ -1.12
SORT1-209ENST00000538502 YEATS4O95619 227 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 VPS36Q86VN1 386 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 GNL3LQ9NVN8 582 aaKnown RBP8.06□□□□□ -1.12
SORT1-209ENST00000538502 HECW1Q76N89 1606 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 RNF187Q5TA31 235 aaPredicted RBP8.06□□□□□ -1.12
SORT1-209ENST00000538502 V9GYY5 206 aaPredicted RBP8.06□□□□□ -1.12
SORT1-209ENST00000538502 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 GPATCH11Q8N954 259 aa8.06□□□□□ -1.12
SORT1-209ENST00000538502 TIAM1Q13009 1591 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 TERF1P54274 439 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 NSRP1Q9H0G5 558 aaKnown RBP8.05□□□□□ -1.12
SORT1-209ENST00000538502 ADCY5O95622 1261 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 UBE2HP62256 183 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 C6orf163Q5TEZ5 329 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 DAPK1P53355 1430 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 IFFO1Q0D2I5 559 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 TSG101Q99816 390 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 TBC1D2Q9BYX2 928 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 LRPPRCP42704 1394 aaKnown RBP8.05□□□□□ -1.12
SORT1-209ENST00000538502 ANKRD18BA2A2Z9 1011 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 HSPA4P34932 840 aa8.05□□□□□ -1.12
SORT1-209ENST00000538502 PPP1R12BO60237 982 aaPredicted RBP8.04□□□□□ -1.12
SORT1-209ENST00000538502 KANK3Q6NY19 840 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 NECTIN2Q92692 538 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 HSF2BPO75031 334 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 OGFRQ9NZT2 677 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms