RNA–Protein interactions for RNA: ENST00000534685.5

CHEK1-217, Transcript of checkpoint kinase 1, humanhuman

TSL 5

Gene CHEK1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-217ENST00000534685 USP6P35125 1406 aa12.82□□□□□ -0.36
CHEK1-217ENST00000534685 SOX12O15370 315 aa12.82□□□□□ -0.36
CHEK1-217ENST00000534685 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
CHEK1-217ENST00000534685 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
CHEK1-217ENST00000534685 RREB1Q92766 1687 aa12.81□□□□□ -0.36
CHEK1-217ENST00000534685 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
CHEK1-217ENST00000534685 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
CHEK1-217ENST00000534685 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
CHEK1-217ENST00000534685 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
CHEK1-217ENST00000534685 PLSCR1O15162 318 aa12.8□□□□□ -0.36
CHEK1-217ENST00000534685 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
CHEK1-217ENST00000534685 PYGBP11216 843 aa12.8□□□□□ -0.36
CHEK1-217ENST00000534685 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
CHEK1-217ENST00000534685 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
CHEK1-217ENST00000534685 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
CHEK1-217ENST00000534685 NINLQ9Y2I6 1382 aa12.8□□□□□ -0.36
CHEK1-217ENST00000534685 ZBTB7AO95365 584 aa12.79□□□□□ -0.36
CHEK1-217ENST00000534685 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
CHEK1-217ENST00000534685 EVC2Q86UK5 1308 aa12.78□□□□□ -0.36
CHEK1-217ENST00000534685 SLIT3O75094 1523 aa12.78□□□□□ -0.36
CHEK1-217ENST00000534685 DCAF8Q5TAQ9 597 aa12.77□□□□□ -0.37
CHEK1-217ENST00000534685 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.37
CHEK1-217ENST00000534685 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
CHEK1-217ENST00000534685 TTC21BQ7Z4L5 1316 aa12.77□□□□□ -0.37
CHEK1-217ENST00000534685 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
CHEK1-217ENST00000534685 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
CHEK1-217ENST00000534685 FKBP8Q14318 412 aa12.76□□□□□ -0.37
CHEK1-217ENST00000534685 PDCD7Q8N8D1 485 aaKnown RBP12.76□□□□□ -0.37
CHEK1-217ENST00000534685 CARD10Q9BWT7 1032 aa12.76□□□□□ -0.37
CHEK1-217ENST00000534685 STK32BQ9NY57 414 aa12.76□□□□□ -0.37
CHEK1-217ENST00000534685 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
CHEK1-217ENST00000534685 EXOC5O00471 708 aa12.75□□□□□ -0.37
CHEK1-217ENST00000534685 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
CHEK1-217ENST00000534685 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
CHEK1-217ENST00000534685 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
CHEK1-217ENST00000534685 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
CHEK1-217ENST00000534685 PEAK1Q9H792 1746 aa12.75□□□□□ -0.37
CHEK1-217ENST00000534685 SNPHO15079 494 aa12.74□□□□□ -0.37
CHEK1-217ENST00000534685 MARVELD3Q96A59 401 aa12.74□□□□□ -0.37
CHEK1-217ENST00000534685 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
CHEK1-217ENST00000534685 PTGER2P43116 358 aa12.73□□□□□ -0.37
CHEK1-217ENST00000534685 BCL9O00512 1426 aa12.72□□□□□ -0.37
CHEK1-217ENST00000534685 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
CHEK1-217ENST00000534685 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
CHEK1-217ENST00000534685 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
CHEK1-217ENST00000534685 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
CHEK1-217ENST00000534685 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
CHEK1-217ENST00000534685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHEK1-217ENST00000534685 FHDC1Q9C0D6 1143 aaPredicted RBP12.71□□□□□ -0.37
CHEK1-217ENST00000534685 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.37
CHEK1-217ENST00000534685 ROCK2O75116 1388 aaKnown RBP12.7□□□□□ -0.38
CHEK1-217ENST00000534685 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
CHEK1-217ENST00000534685 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
CHEK1-217ENST00000534685 SIN3AQ96ST3 1273 aa12.7□□□□□ -0.38
CHEK1-217ENST00000534685 COL18A1P39060 1754 aa12.69□□□□□ -0.38
CHEK1-217ENST00000534685 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
CHEK1-217ENST00000534685 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
CHEK1-217ENST00000534685 MTFR1LQ9H019 292 aa12.69□□□□□ -0.38
CHEK1-217ENST00000534685 TNS2Q63HR2 1409 aa12.69□□□□□ -0.38
CHEK1-217ENST00000534685 NME9Q86XW9 330 aa12.68□□□□□ -0.38
CHEK1-217ENST00000534685 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
CHEK1-217ENST00000534685 RGPD3A6NKT7 1758 aaPredicted RBP12.68□□□□□ -0.38
CHEK1-217ENST00000534685 RGPD4Q7Z3J3 1758 aa12.68□□□□□ -0.38
CHEK1-217ENST00000534685 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
CHEK1-217ENST00000534685 NFAT5O94916 1531 aa12.67□□□□□ -0.38
CHEK1-217ENST00000534685 POTEB3A0JP26 581 aa12.67□□□□□ -0.38
CHEK1-217ENST00000534685 POTEBQ6S5H4 581 aa12.67□□□□□ -0.38
CHEK1-217ENST00000534685 TRPM1Q7Z4N2 1603 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 ERBB3P21860 1342 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 IL2RBP14784 551 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 ARXQ96QS3 562 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 MYOM1P52179 1685 aa12.66□□□□□ -0.38
CHEK1-217ENST00000534685 ZNF827Q17R98 1081 aa12.65□□□□□ -0.38
CHEK1-217ENST00000534685 USP31Q70CQ4 1352 aa12.65□□□□□ -0.38
CHEK1-217ENST00000534685 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
CHEK1-217ENST00000534685 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
CHEK1-217ENST00000534685 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
CHEK1-217ENST00000534685 LRRC4BQ9NT99 713 aa12.63□□□□□ -0.39
CHEK1-217ENST00000534685 SBNO2Q9Y2G9 1366 aa12.63□□□□□ -0.39
CHEK1-217ENST00000534685 CHRM1P11229 460 aaPredicted RBP12.62□□□□□ -0.39
CHEK1-217ENST00000534685 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
CHEK1-217ENST00000534685 LTV1Q96GA3 475 aaPredicted RBP12.62□□□□□ -0.39
CHEK1-217ENST00000534685 SLC12A5Q9H2X9 1139 aa12.62□□□□□ -0.39
CHEK1-217ENST00000534685 ABCC6O95255 1503 aa12.62□□□□□ -0.39
CHEK1-217ENST00000534685 AKAP12Q02952 1782 aa12.61□□□□□ -0.39
CHEK1-217ENST00000534685 GPR162Q16538 588 aa12.61□□□□□ -0.39
CHEK1-217ENST00000534685 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
CHEK1-217ENST00000534685 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
CHEK1-217ENST00000534685 KRTAP3-2Q9BYR7 98 aa12.61□□□□□ -0.39
CHEK1-217ENST00000534685 CD163L1Q9NR16 1453 aa12.6□□□□□ -0.39
CHEK1-217ENST00000534685 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
CHEK1-217ENST00000534685 KCNQ4P56696 695 aa12.6□□□□□ -0.39
CHEK1-217ENST00000534685 SYTL4Q96C24 671 aaPredicted RBP12.6□□□□□ -0.39
CHEK1-217ENST00000534685 RGPD5Q99666 1765 aa12.6□□□□□ -0.39
CHEK1-217ENST00000534685 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
CHEK1-217ENST00000534685 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
CHEK1-217ENST00000534685 TERF2IPQ9NYB0 399 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms