RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 FAM9AQ8IZU1 332 aaPredicted RBP8.63□□□□□ -1.03
ATM-224ENST00000534625 PURBQ96QR8 312 aaKnown RBP8.63□□□□□ -1.03
ATM-224ENST00000534625 MAGI3Q5TCQ9 1506 aa8.63□□□□□ -1.03
ATM-224ENST00000534625 SAMD9Q5K651 1589 aa8.62□□□□□ -1.03
ATM-224ENST00000534625 NNTQ13423 1086 aa8.62□□□□□ -1.03
ATM-224ENST00000534625 FAM174AQ8TBP5 190 aa8.61□□□□□ -1.03
ATM-224ENST00000534625 CDK15Q96Q40 435 aa8.61□□□□□ -1.03
ATM-224ENST00000534625 CFAP43Q8NDM7 1665 aa8.61□□□□□ -1.03
ATM-224ENST00000534625 TIMP2P16035 220 aa8.6□□□□□ -1.03
ATM-224ENST00000534625 RANGAP1P46060 587 aaPredicted RBP8.6□□□□□ -1.03
ATM-224ENST00000534625 SCARF1Q14162 830 aa8.6□□□□□ -1.03
ATM-224ENST00000534625 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
ATM-224ENST00000534625 LRRN4Q8WUT4 740 aa8.6□□□□□ -1.03
ATM-224ENST00000534625 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
ATM-224ENST00000534625 SUZ12Q15022 739 aaKnown RBP8.59□□□□□ -1.03
ATM-224ENST00000534625 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
ATM-224ENST00000534625 KLF16Q9BXK1 252 aaPredicted RBP8.59□□□□□ -1.03
ATM-224ENST00000534625 FHOD3Q2V2M9 1422 aa8.59□□□□□ -1.03
ATM-224ENST00000534625 ADGRL1O94910 1474 aa8.58□□□□□ -1.04
ATM-224ENST00000534625 BPHLQ86WA6 291 aaPredicted RBP8.58□□□□□ -1.04
ATM-224ENST00000534625 ARMC2Q8NEN0 867 aa8.58□□□□□ -1.04
ATM-224ENST00000534625 C1QTNF2Q9BXJ5 285 aa8.58□□□□□ -1.04
ATM-224ENST00000534625 RAPGEF6Q8TEU7 1601 aa8.58□□□□□ -1.04
ATM-224ENST00000534625 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
ATM-224ENST00000534625 ADH1CP00326 375 aa8.57□□□□□ -1.04
ATM-224ENST00000534625 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
ATM-224ENST00000534625 GRM5P41594 1212 aa8.57□□□□□ -1.04
ATM-224ENST00000534625 ARAP3Q8WWN8 1544 aa8.56□□□□□ -1.04
ATM-224ENST00000534625 KIF21BO75037 1637 aa8.56□□□□□ -1.04
ATM-224ENST00000534625 ABCA9Q8IUA7 1624 aa8.56□□□□□ -1.04
ATM-224ENST00000534625 AGERQ15109 404 aa8.56□□□□□ -1.04
ATM-224ENST00000534625 NR3C2P08235 984 aa8.55□□□□□ -1.04
ATM-224ENST00000534625 NR6A1Q15406 480 aa8.55□□□□□ -1.04
ATM-224ENST00000534625 NBPF14Q5TI25 921 aa8.55□□□□□ -1.04
ATM-224ENST00000534625 PHLDB1Q86UU1 1377 aa8.55□□□□□ -1.04
ATM-224ENST00000534625 PLEKHD1A6NEE1 506 aa8.54□□□□□ -1.04
ATM-224ENST00000534625 KCNMA1Q12791 1236 aa8.54□□□□□ -1.04
ATM-224ENST00000534625 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
ATM-224ENST00000534625 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
ATM-224ENST00000534625 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
ATM-224ENST00000534625 EPS8L1Q8TE68 723 aa8.54□□□□□ -1.04
ATM-224ENST00000534625 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.04
ATM-224ENST00000534625 AP1G2O75843 785 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 RAPGEF3O95398 923 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 UBTFP17480 764 aaKnown RBP8.53□□□□□ -1.04
ATM-224ENST00000534625 GSK3AP49840 483 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 BRPF1P55201 1214 aaPredicted RBP8.53□□□□□ -1.04
ATM-224ENST00000534625 C6orf118Q5T5N4 469 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
ATM-224ENST00000534625 ZFAND3Q9H8U3 227 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 GOPCQ9HD26 462 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 FKBPLQ9UIM3 349 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 EFCAB5A4FU69 1503 aa8.53□□□□□ -1.04
ATM-224ENST00000534625 NEO1Q92859 1461 aa8.52□□□□□ -1.05
ATM-224ENST00000534625 MAN1A2O60476 641 aa8.52□□□□□ -1.05
ATM-224ENST00000534625 RFC5P40937 340 aa8.52□□□□□ -1.05
ATM-224ENST00000534625 NR5A1Q13285 461 aa8.52□□□□□ -1.05
ATM-224ENST00000534625 PDXDC2PQ6P474 469 aa8.52□□□□□ -1.05
ATM-224ENST00000534625 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
ATM-224ENST00000534625 HMX1Q9NP08 348 aaPredicted RBP8.52□□□□□ -1.05
ATM-224ENST00000534625 ATP1B4Q9UN42 357 aaPredicted RBP8.52□□□□□ -1.05
ATM-224ENST00000534625 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
ATM-224ENST00000534625 PPFIA3O75145 1194 aa8.51□□□□□ -1.05
ATM-224ENST00000534625 ZIC2O95409 532 aaPredicted RBP8.51□□□□□ -1.05
ATM-224ENST00000534625 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
ATM-224ENST00000534625 IL27Q8NEV9 243 aa8.51□□□□□ -1.05
ATM-224ENST00000534625 ITPKCQ96DU7 683 aa8.51□□□□□ -1.05
ATM-224ENST00000534625 MAP4K5Q9Y4K4 846 aa8.51□□□□□ -1.05
ATM-224ENST00000534625 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
ATM-224ENST00000534625 CARD14Q9BXL6 1004 aa8.5□□□□□ -1.05
ATM-224ENST00000534625 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
ATM-224ENST00000534625 CDK13Q14004 1512 aaKnown RBP8.49□□□□□ -1.05
ATM-224ENST00000534625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATM-224ENST00000534625 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
ATM-224ENST00000534625 AKNAQ7Z591 1439 aa8.48□□□□□ -1.05
ATM-224ENST00000534625 FSHRP23945 695 aa8.48□□□□□ -1.05
ATM-224ENST00000534625 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
ATM-224ENST00000534625 VASH1Q7L8A9 365 aaPredicted RBP8.48□□□□□ -1.05
ATM-224ENST00000534625 ARHGAP9Q9BRR9 750 aa8.48□□□□□ -1.05
ATM-224ENST00000534625 ZC3H4Q9UPT8 1303 aaKnown RBP8.48□□□□□ -1.05
ATM-224ENST00000534625 FMN1Q68DA7 1419 aa8.47□□□□□ -1.05
ATM-224ENST00000534625 PCMTD1Q96MG8 357 aaPredicted RBP8.47□□□□□ -1.05
ATM-224ENST00000534625 FANCAO15360 1455 aa8.46□□□□□ -1.05
ATM-224ENST00000534625 DENND4BO75064 1496 aaPredicted RBP8.46□□□□□ -1.05
ATM-224ENST00000534625 BMP2P12643 396 aa8.46□□□□□ -1.06
ATM-224ENST00000534625 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.06
ATM-224ENST00000534625 TTC37Q6PGP7 1564 aa8.46□□□□□ -1.06
ATM-224ENST00000534625 HECW2Q9P2P5 1572 aa8.45□□□□□ -1.06
ATM-224ENST00000534625 TMEM151AQ8N4L1 468 aa8.45□□□□□ -1.06
ATM-224ENST00000534625 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
ATM-224ENST00000534625 ADAMTSL3P82987 1691 aa8.45□□□□□ -1.06
ATM-224ENST00000534625 PLCH2O75038 1416 aa8.45□□□□□ -1.06
ATM-224ENST00000534625 RICTORQ6R327 1708 aa8.44□□□□□ -1.06
ATM-224ENST00000534625 GDF11O95390 407 aa8.44□□□□□ -1.06
ATM-224ENST00000534625 KRT76Q01546 638 aa8.44□□□□□ -1.06
ATM-224ENST00000534625 RASSF7Q02833 373 aa8.44□□□□□ -1.06
ATM-224ENST00000534625 CCDC116Q8IYX3 515 aa8.44□□□□□ -1.06
ATM-224ENST00000534625 DNMT3LQ9UJW3 386 aa8.44□□□□□ -1.06
ATM-224ENST00000534625 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
ATM-224ENST00000534625 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms