RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 EVC2Q86UK5 1308 aa12.96□□□□□ -0.33
BEST3-207ENST00000533674 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
BEST3-207ENST00000533674 PLSCR1O15162 318 aa12.96□□□□□ -0.33
BEST3-207ENST00000533674 SBF2Q86WG5 1849 aa12.96□□□□□ -0.33
BEST3-207ENST00000533674 PIK3C2AO00443 1686 aa12.96□□□□□ -0.34
BEST3-207ENST00000533674 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
BEST3-207ENST00000533674 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
BEST3-207ENST00000533674 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
BEST3-207ENST00000533674 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
BEST3-207ENST00000533674 STK32BQ9NY57 414 aa12.94□□□□□ -0.34
BEST3-207ENST00000533674 TRPM1Q7Z4N2 1603 aa12.93□□□□□ -0.34
BEST3-207ENST00000533674 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
BEST3-207ENST00000533674 ZNF467Q7Z7K2 595 aaPredicted RBP12.93□□□□□ -0.34
BEST3-207ENST00000533674 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
BEST3-207ENST00000533674 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
BEST3-207ENST00000533674 CASZ1Q86V15 1759 aa12.92□□□□□ -0.34
BEST3-207ENST00000533674 EXOC5O00471 708 aa12.92□□□□□ -0.34
BEST3-207ENST00000533674 C7P10643 843 aa12.92□□□□□ -0.34
BEST3-207ENST00000533674 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
BEST3-207ENST00000533674 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
BEST3-207ENST00000533674 COL18A1P39060 1754 aa12.92□□□□□ -0.34
BEST3-207ENST00000533674 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
BEST3-207ENST00000533674 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
BEST3-207ENST00000533674 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 TTC21AQ8NDW8 1320 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 MYOM1P52179 1685 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
BEST3-207ENST00000533674 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
BEST3-207ENST00000533674 CCDC7Q96M83 1385 aa12.9□□□□□ -0.34
BEST3-207ENST00000533674 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
BEST3-207ENST00000533674 SLC15A2Q16348 729 aa12.88□□□□□ -0.35
BEST3-207ENST00000533674 L3MBTL2Q969R5 705 aa12.88□□□□□ -0.35
BEST3-207ENST00000533674 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
BEST3-207ENST00000533674 BCL9O00512 1426 aa12.88□□□□□ -0.35
BEST3-207ENST00000533674 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
BEST3-207ENST00000533674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
BEST3-207ENST00000533674 NLRP2Q9NX02 1062 aa12.87□□□□□ -0.35
BEST3-207ENST00000533674 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
BEST3-207ENST00000533674 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
BEST3-207ENST00000533674 FHDC1Q9C0D6 1143 aaPredicted RBP12.86□□□□□ -0.35
BEST3-207ENST00000533674 MTFR1LQ9H019 292 aa12.86□□□□□ -0.35
BEST3-207ENST00000533674 ABCC6O95255 1503 aa12.86□□□□□ -0.35
BEST3-207ENST00000533674 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
BEST3-207ENST00000533674 NFAT5O94916 1531 aa12.85□□□□□ -0.35
BEST3-207ENST00000533674 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
BEST3-207ENST00000533674 PTGER2P43116 358 aa12.84□□□□□ -0.35
BEST3-207ENST00000533674 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
BEST3-207ENST00000533674 LTN1O94822 1766 aa12.84□□□□□ -0.35
BEST3-207ENST00000533674 IL2RBP14784 551 aa12.83□□□□□ -0.36
BEST3-207ENST00000533674 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
BEST3-207ENST00000533674 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
BEST3-207ENST00000533674 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
BEST3-207ENST00000533674 IER5LQ5T953 404 aa12.82□□□□□ -0.36
BEST3-207ENST00000533674 ARXQ96QS3 562 aa12.82□□□□□ -0.36
BEST3-207ENST00000533674 ERBB3P21860 1342 aa12.82□□□□□ -0.36
BEST3-207ENST00000533674 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
BEST3-207ENST00000533674 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
BEST3-207ENST00000533674 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
BEST3-207ENST00000533674 SIN3AQ96ST3 1273 aa12.81□□□□□ -0.36
BEST3-207ENST00000533674 BTAF1O14981 1849 aa12.81□□□□□ -0.36
BEST3-207ENST00000533674 NME9Q86XW9 330 aa12.8□□□□□ -0.36
BEST3-207ENST00000533674 POLD1P28340 1107 aa12.79□□□□□ -0.36
BEST3-207ENST00000533674 GPR162Q16538 588 aa12.79□□□□□ -0.36
BEST3-207ENST00000533674 SYTL4Q96C24 671 aaPredicted RBP12.79□□□□□ -0.36
BEST3-207ENST00000533674 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
BEST3-207ENST00000533674 USP54Q70EL1 1684 aa12.78□□□□□ -0.36
BEST3-207ENST00000533674 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
BEST3-207ENST00000533674 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
BEST3-207ENST00000533674 PSEN1P49768 467 aa12.78□□□□□ -0.36
BEST3-207ENST00000533674 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
BEST3-207ENST00000533674 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
BEST3-207ENST00000533674 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
BEST3-207ENST00000533674 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
BEST3-207ENST00000533674 CHD4Q14839 1912 aa12.78□□□□□ -0.36
BEST3-207ENST00000533674 PAPPAQ13219 1627 aa12.77□□□□□ -0.36
BEST3-207ENST00000533674 LTV1Q96GA3 475 aaPredicted RBP12.77□□□□□ -0.37
BEST3-207ENST00000533674 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
BEST3-207ENST00000533674 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
BEST3-207ENST00000533674 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
BEST3-207ENST00000533674 SBNO2Q9Y2G9 1366 aa12.76□□□□□ -0.37
BEST3-207ENST00000533674 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
BEST3-207ENST00000533674 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
BEST3-207ENST00000533674 SLC27A3Q5K4L6 730 aa12.75□□□□□ -0.37
BEST3-207ENST00000533674 CD163L1Q9NR16 1453 aa12.74□□□□□ -0.37
BEST3-207ENST00000533674 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
BEST3-207ENST00000533674 SEC24BO95487 1268 aa12.74□□□□□ -0.37
BEST3-207ENST00000533674 SLC16A10Q8TF71 515 aa12.74□□□□□ -0.37
BEST3-207ENST00000533674 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
BEST3-207ENST00000533674 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
BEST3-207ENST00000533674 A0A1W2PP64 1363 aa12.73□□□□□ -0.37
BEST3-207ENST00000533674 COG3Q96JB2 828 aa12.73□□□□□ -0.37
BEST3-207ENST00000533674 LRRC4BQ9NT99 713 aa12.73□□□□□ -0.37
BEST3-207ENST00000533674 QSER1Q2KHR3 1735 aa12.72□□□□□ -0.37
BEST3-207ENST00000533674 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
BEST3-207ENST00000533674 GIGYF1O75420 1035 aaPredicted RBP12.72□□□□□ -0.37
BEST3-207ENST00000533674 AMPHP49418 695 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms