RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
TRAF3IP2-212ENST00000532708 LRRC37A3O60309 1634 aa15.97■□□□□ 0.15
TRAF3IP2-212ENST00000532708 CCDC184Q52MB2 194 aa15.96■□□□□ 0.15
TRAF3IP2-212ENST00000532708 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
TRAF3IP2-212ENST00000532708 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAF3IP2-212ENST00000532708 ZCRB1Q8TBF4 217 aaKnown RBP15.96■□□□□ 0.15
TRAF3IP2-212ENST00000532708 DDX54Q8TDD1 881 aaKnown RBP15.96■□□□□ 0.15
TRAF3IP2-212ENST00000532708 OVOS2A0A0G2JMS6 1433 aa15.95■□□□□ 0.14
TRAF3IP2-212ENST00000532708 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
TRAF3IP2-212ENST00000532708 KDRP35968 1356 aa15.94■□□□□ 0.14
TRAF3IP2-212ENST00000532708 TNS2Q63HR2 1409 aa15.94■□□□□ 0.14
TRAF3IP2-212ENST00000532708 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
TRAF3IP2-212ENST00000532708 SPG7Q9UQ90 795 aa15.91■□□□□ 0.14
TRAF3IP2-212ENST00000532708 SHANK3Q9BYB0 1731 aa15.9■□□□□ 0.14
TRAF3IP2-212ENST00000532708 CYP27B1O15528 508 aa15.9■□□□□ 0.14
TRAF3IP2-212ENST00000532708 PRKAR2BP31323 418 aa15.9■□□□□ 0.14
TRAF3IP2-212ENST00000532708 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP2-212ENST00000532708 MRS2Q9HD23 443 aa15.89■□□□□ 0.13
TRAF3IP2-212ENST00000532708 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
TRAF3IP2-212ENST00000532708 FCHSD2O94868 740 aa15.89■□□□□ 0.13
TRAF3IP2-212ENST00000532708 FAM196AQ6ZSG2 479 aa15.89■□□□□ 0.13
TRAF3IP2-212ENST00000532708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PKD1L3Q7Z443 1732 aa15.88■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
TRAF3IP2-212ENST00000532708 WDR43Q15061 677 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRAF3IP2-212ENST00000532708 AMOTQ4VCS5 1084 aa15.88■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PHACTR3Q96KR7 559 aa15.88■□□□□ 0.13
TRAF3IP2-212ENST00000532708 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
TRAF3IP2-212ENST00000532708 MTHFSDQ2M296 383 aaKnown RBP15.87■□□□□ 0.13
TRAF3IP2-212ENST00000532708 ZNF530Q6P9A1 599 aaPredicted RBP15.87■□□□□ 0.13
TRAF3IP2-212ENST00000532708 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
TRAF3IP2-212ENST00000532708 TRIM37O94972 964 aa15.86■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PHKG2P15735 406 aa15.86■□□□□ 0.13
TRAF3IP2-212ENST00000532708 MIER1Q8N108 512 aa15.86■□□□□ 0.13
TRAF3IP2-212ENST00000532708 IFNL2Q8IZJ0 200 aa15.86■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
TRAF3IP2-212ENST00000532708 KCNQ2O43526 872 aa15.84■□□□□ 0.13
TRAF3IP2-212ENST00000532708 CCDC146Q8IYE0 955 aa15.84■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PNISRQ8TF01 805 aaKnown RBP15.84■□□□□ 0.13
TRAF3IP2-212ENST00000532708 UPF1Q92900 1129 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PLEKHF1Q96S99 279 aa15.84■□□□□ 0.13
TRAF3IP2-212ENST00000532708 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
TRAF3IP2-212ENST00000532708 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.13
TRAF3IP2-212ENST00000532708 SBF2Q86WG5 1849 aa15.83■□□□□ 0.12
TRAF3IP2-212ENST00000532708 SYTL4Q96C24 671 aaPredicted RBP15.83■□□□□ 0.12
TRAF3IP2-212ENST00000532708 PRIM1P49642 420 aaKnown RBP15.82■□□□□ 0.12
TRAF3IP2-212ENST00000532708 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
TRAF3IP2-212ENST00000532708 NEFMP07197 916 aa15.82■□□□□ 0.12
TRAF3IP2-212ENST00000532708 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
TRAF3IP2-212ENST00000532708 PNNQ9H307 717 aaKnown RBP15.82■□□□□ 0.12
TRAF3IP2-212ENST00000532708 BCL9O00512 1426 aa15.82■□□□□ 0.12
TRAF3IP2-212ENST00000532708 AKAP4Q5JQC9 854 aa15.81■□□□□ 0.12
TRAF3IP2-212ENST00000532708 GAS2L2Q8NHY3 880 aa15.81■□□□□ 0.12
TRAF3IP2-212ENST00000532708 SOCS7O14512 581 aa15.8■□□□□ 0.12
TRAF3IP2-212ENST00000532708 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
TRAF3IP2-212ENST00000532708 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
TRAF3IP2-212ENST00000532708 DOT1LQ8TEK3 1739 aa15.8■□□□□ 0.12
TRAF3IP2-212ENST00000532708 LGR6Q9HBX8 967 aa15.8■□□□□ 0.12
TRAF3IP2-212ENST00000532708 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
TRAF3IP2-212ENST00000532708 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
TRAF3IP2-212ENST00000532708 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 KDM6AO15550 1401 aaPredicted RBP15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 TOGARAM1Q9Y4F4 1720 aa15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 APBA3O96018 575 aa15.78■□□□□ 0.12
TRAF3IP2-212ENST00000532708 DEFB132Q7Z7B7 95 aa15.77■□□□□ 0.12
TRAF3IP2-212ENST00000532708 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
TRAF3IP2-212ENST00000532708 RRP7AQ9Y3A4 280 aaKnown RBP15.77■□□□□ 0.12
TRAF3IP2-212ENST00000532708 MAP3K5Q99683 1374 aa15.77■□□□□ 0.11
TRAF3IP2-212ENST00000532708 RNMTO43148 476 aaKnown RBP15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 NHSQ6T4R5 1651 aa15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 TNS1Q9HBL0 1735 aaKnown RBP15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 ITGB4P16144 1822 aa15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 DCTN1Q14203 1278 aa15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
TRAF3IP2-212ENST00000532708 TMPOP42166 694 aaKnown RBP15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 PIGBQ92521 554 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 DLG5Q8TDM6 1919 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 ERVV-2B6SEH9 535 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 APAF1O14727 1248 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 RIPK4P57078 832 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 CABP4P57796 275 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 MCM10Q7L590 875 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 NFATC2IPQ8NCF5 419 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 TMOD3Q9NYL9 352 aa15.75■□□□□ 0.11
TRAF3IP2-212ENST00000532708 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
TRAF3IP2-212ENST00000532708 SCN11AQ9UI33 1791 aa15.74■□□□□ 0.11
TRAF3IP2-212ENST00000532708 BTAF1O14981 1849 aa15.74■□□□□ 0.11
TRAF3IP2-212ENST00000532708 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
TRAF3IP2-212ENST00000532708 BAG6P46379 1132 aa15.73■□□□□ 0.11
TRAF3IP2-212ENST00000532708 THUMPD2Q9BTF0 503 aaKnown RBP15.72■□□□□ 0.11
TRAF3IP2-212ENST00000532708 SLC52A2Q9HAB3 445 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms