RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 PDE3BQ13370 1112 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 DEPDC4Q8N2C3 294 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 IL17RAQ96F46 866 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 CCDC85AQ96PX6 553 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 ADGRG1Q9Y653 693 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 GOLGA2Q08379 1002 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 ANKMY2Q8IV38 441 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 CACTIN-AS1Q8N1I8 211 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 PRPF38AQ8NAV1 312 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 TMX4Q9H1E5 349 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 RNF39Q9H2S5 420 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 PARP2Q9UGN5 583 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 ZNF500O60304 480 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 SKIP12755 728 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 CD46P15529 392 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 FRMD6Q96NE9 622 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 ZBTB3Q9H5J0 574 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 MAP3K13O43283 966 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 PLEKHG4Q58EX7 1191 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 CCSAPQ6IQ19 270 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 TAS1R3Q7RTX0 852 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 IER2Q9BTL4 223 aa6.8□□□□□ -1.32
ECHDC1-222ENST00000531967 MAP3K7O43318 606 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 SORBS3O60504 671 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 VIL1P09327 827 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 LMOD3Q0VAK6 560 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 RINLQ6ZS11 566 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 SAFB2Q14151 953 aaKnown RBP eCLIP6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 DHX8Q14562 1220 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 ZNF280DQ6N043 979 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 TMC4Q7Z404 712 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 RNPC3Q96LT9 517 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 VTI1BQ9UEU0 232 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 SFMBT1Q9UHJ3 866 aa6.79□□□□□ -1.32
ECHDC1-222ENST00000531967 FGRP09769 529 aa6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 PPARGC1BQ86YN6 1023 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 PNMA1Q8ND90 353 aa6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 ANP32EQ9BTT0 268 aa6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 ANO8Q9HCE9 1232 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 EVI5O60447 810 aa6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 PRMT3O60678 531 aa6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 ITGAEP38570 1179 aa6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 RNF19AQ9NV58 838 aa6.78□□□□□ -1.32
ECHDC1-222ENST00000531967 CFAP69A5D8W1 941 aa6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 DPYDQ12882 1025 aa6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 PCGF5Q86SE9 256 aa6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 EPAS1Q99814 870 aa6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 DUSP9Q99956 384 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 MAP3K20Q9NYL2 800 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 THRAP3Q9Y2W1 955 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 LDHAP00338 332 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 FMR1Q06787 632 aaKnown RBP eCLIP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 GTF3C2Q8WUA4 911 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 NAP1L4Q99733 375 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 CXXC1Q9P0U4 656 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 KCNG1Q9UIX4 513 aa6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 EID1Q9Y6B2 187 aa6.77□□□□□ -1.33
ECHDC1-222ENST00000531967 ATP5J2-PTCD1G3V325 749 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 ANP32CO43423 234 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 PRPF40AO75400 957 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 FMNL1O95466 1100 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 FKBP4Q02790 459 aaKnown RBP eCLIP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 SERINC3Q13530 473 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 FERMT3Q86UX7 667 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 NRBP1Q9UHY1 535 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 EPB41L2O43491 1005 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 LDHBP07195 334 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 GNALP38405 381 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 DAB2P98082 770 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 CBLBQ13191 982 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 MTMR3Q13615 1198 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 OCLNQ16625 522 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 VPS37DQ86XT2 251 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 SDR16C5Q8N3Y7 309 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 FAM174AQ8TBP5 190 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 SECISBP2LQ93073 1101 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 RELTQ969Z4 430 aa6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 MPHOSPH6Q99547 160 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-222ENST00000531967 TNFRSF10BO14763 440 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 CD53P19397 219 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 PADI6Q6TGC4 694 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 SLC39A13Q96H72 371 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 SLKQ9H2G2 1235 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 TMX1Q9H3N1 280 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 C2orf72A6NCS6 295 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 TREHO43280 583 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 HSP90AA1P07900 732 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 C1QBPQ07021 282 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 ZNF394Q53GI3 561 aa6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 TSR2Q969E8 191 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-222ENST00000531967 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.75□□□□□ -1.337e-6■■■■□ 21.2
ECHDC1-222ENST00000531967 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 PSMD2Q13200 908 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 NCOA4Q13772 614 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms