RNA–Protein interactions for RNA: ENST00000531309.1

DKK3-210, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-210ENST00000531309 ARHGAP31Q2M1Z3 1444 aa8.71□□□□□ -1.01
DKK3-210ENST00000531309 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
DKK3-210ENST00000531309 R3HDM1Q15032 1099 aaKnown RBP8.71□□□□□ -1.02
DKK3-210ENST00000531309 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
DKK3-210ENST00000531309 DDX17Q92841 729 aaKnown RBP8.71□□□□□ -1.02
DKK3-210ENST00000531309 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
DKK3-210ENST00000531309 PLEKHG1Q9ULL1 1385 aa8.71□□□□□ -1.02
DKK3-210ENST00000531309 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
DKK3-210ENST00000531309 C1QTNF8P60827 252 aa8.7□□□□□ -1.02
DKK3-210ENST00000531309 IDI1Q13907 227 aa8.7□□□□□ -1.02
DKK3-210ENST00000531309 PPP1R1BQ9UD71 204 aaPredicted RBP8.7□□□□□ -1.02
DKK3-210ENST00000531309 GLI3P10071 1580 aa8.69□□□□□ -1.02
DKK3-210ENST00000531309 NLRP7Q8WX94 980 aa8.69□□□□□ -1.02
DKK3-210ENST00000531309 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
DKK3-210ENST00000531309 MST1RQ04912 1400 aa8.69□□□□□ -1.02
DKK3-210ENST00000531309 TRPM2O94759 1503 aa8.69□□□□□ -1.02
DKK3-210ENST00000531309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.68□□□□□ -1.02
DKK3-210ENST00000531309 SNPHO15079 494 aa8.68□□□□□ -1.02
DKK3-210ENST00000531309 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
DKK3-210ENST00000531309 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
DKK3-210ENST00000531309 KANK1Q14678 1352 aa8.68□□□□□ -1.02
DKK3-210ENST00000531309 LAMC1P11047 1609 aa8.67□□□□□ -1.02
DKK3-210ENST00000531309 PTPREP23469 700 aa8.67□□□□□ -1.02
DKK3-210ENST00000531309 DIXDC1Q155Q3 683 aa8.67□□□□□ -1.02
DKK3-210ENST00000531309 RALGAPBQ86X10 1494 aa8.67□□□□□ -1.02
DKK3-210ENST00000531309 DUOX2Q9NRD8 1548 aa8.67□□□□□ -1.02
DKK3-210ENST00000531309 TBX22Q9Y458 520 aa8.67□□□□□ -1.02
DKK3-210ENST00000531309 RPRD2Q5VT52 1461 aaKnown RBP8.66□□□□□ -1.02
DKK3-210ENST00000531309 RIMS2Q9UQ26 1411 aa8.66□□□□□ -1.02
DKK3-210ENST00000531309 PIK3R4Q99570 1358 aa8.66□□□□□ -1.02
DKK3-210ENST00000531309 A0A0G2JS52 829 aa8.66□□□□□ -1.02
DKK3-210ENST00000531309 PPP1R3GB7ZBB8 358 aa8.66□□□□□ -1.02
DKK3-210ENST00000531309 COL9A1P20849 921 aa8.66□□□□□ -1.02
DKK3-210ENST00000531309 MYT1Q01538 1121 aa8.66□□□□□ -1.02
DKK3-210ENST00000531309 TNS1Q9HBL0 1735 aaKnown RBP8.66□□□□□ -1.02
DKK3-210ENST00000531309 ANKRD50Q9ULJ7 1429 aa8.65□□□□□ -1.02
DKK3-210ENST00000531309 RCCD1A6NED2 376 aa8.65□□□□□ -1.02
DKK3-210ENST00000531309 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
DKK3-210ENST00000531309 EYA1Q99502 592 aa8.65□□□□□ -1.02
DKK3-210ENST00000531309 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
DKK3-210ENST00000531309 ZFYVE9O95405 1425 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 KIF15Q9NS87 1388 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 XRN1Q8IZH2 1706 aaKnown RBP8.64□□□□□ -1.03
DKK3-210ENST00000531309 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
DKK3-210ENST00000531309 MYSM1Q5VVJ2 828 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 MPHOSPH9Q99550 1183 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 PLCH1Q4KWH8 1693 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 ADGRB2O60241 1585 aa8.64□□□□□ -1.03
DKK3-210ENST00000531309 NINLQ9Y2I6 1382 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 TMEM131LA2VDJ0 1609 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 NBPF26B4DH59 902 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 UNC5CLQ8IV45 518 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
DKK3-210ENST00000531309 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
DKK3-210ENST00000531309 TBC1D2Q9BYX2 928 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 CCDC9Q9Y3X0 531 aaKnown RBP8.63□□□□□ -1.03
DKK3-210ENST00000531309 NWD2Q9ULI1 1742 aa8.63□□□□□ -1.03
DKK3-210ENST00000531309 PACS2Q86VP3 889 aa8.62□□□□□ -1.03
DKK3-210ENST00000531309 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
DKK3-210ENST00000531309 A6NJR5 290 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 TRIM6-TRIM34B2RNG4 842 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 DNAJB2P25686 324 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 CLK2P49760 499 aaKnown RBP8.61□□□□□ -1.03
DKK3-210ENST00000531309 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 SULF1Q8IWU6 871 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 PNMA3Q9UL41 463 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 ADAMTS13Q76LX8 1427 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 ADGRL3Q9HAR2 1447 aa8.61□□□□□ -1.03
DKK3-210ENST00000531309 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
DKK3-210ENST00000531309 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
DKK3-210ENST00000531309 RREB1Q92766 1687 aa8.6□□□□□ -1.03
DKK3-210ENST00000531309 MYOM2P54296 1465 aa8.6□□□□□ -1.03
DKK3-210ENST00000531309 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
DKK3-210ENST00000531309 CD46P15529 392 aa8.6□□□□□ -1.03
DKK3-210ENST00000531309 TATDN2Q93075 761 aa8.6□□□□□ -1.03
DKK3-210ENST00000531309 SPON1Q9HCB6 807 aa8.6□□□□□ -1.03
DKK3-210ENST00000531309 ERBINQ96RT1 1412 aa8.6□□□□□ -1.03
DKK3-210ENST00000531309 C1orf167Q5SNV9 1468 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 USP32Q8NFA0 1604 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 MCM6Q14566 821 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 SIN3AQ96ST3 1273 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 NOS1P29475 1434 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 PTPRUQ92729 1446 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 NUP155O75694 1391 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 LMTK2Q8IWU2 1503 aa8.59□□□□□ -1.03
DKK3-210ENST00000531309 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
DKK3-210ENST00000531309 EZH2Q15910 746 aaKnown RBP8.58□□□□□ -1.04
DKK3-210ENST00000531309 SPIRE2Q8WWL2 714 aa8.58□□□□□ -1.04
DKK3-210ENST00000531309 SLIT2O94813 1529 aa8.58□□□□□ -1.04
DKK3-210ENST00000531309 TUSC1Q2TAM9 212 aa8.57□□□□□ -1.04
DKK3-210ENST00000531309 NBPF8Q3BBV2 869 aa8.57□□□□□ -1.04
DKK3-210ENST00000531309 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
DKK3-210ENST00000531309 RIC3Q7Z5B4 369 aa8.57□□□□□ -1.04
DKK3-210ENST00000531309 NUTM1Q86Y26 1132 aa8.57□□□□□ -1.04
DKK3-210ENST00000531309 TMEM134Q9H6X4 195 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms