RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
RPUSD4-205ENST00000530903 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
RPUSD4-205ENST00000530903 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
RPUSD4-205ENST00000530903 INSRP06213 1382 aa13.35□□□□□ -0.27
RPUSD4-205ENST00000530903 RTL1A6NKG5 1358 aa13.34□□□□□ -0.27
RPUSD4-205ENST00000530903 DIAPH1O60610 1272 aaKnown RBP13.34□□□□□ -0.27
RPUSD4-205ENST00000530903 HOXC9P31274 260 aa13.34□□□□□ -0.27
RPUSD4-205ENST00000530903 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
RPUSD4-205ENST00000530903 KIF24Q5T7B8 1368 aa13.33□□□□□ -0.28
RPUSD4-205ENST00000530903 KIAA0232Q92628 1395 aa13.33□□□□□ -0.28
RPUSD4-205ENST00000530903 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.28
RPUSD4-205ENST00000530903 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
RPUSD4-205ENST00000530903 COL18A1P39060 1754 aa13.32□□□□□ -0.28
RPUSD4-205ENST00000530903 SEC24BO95487 1268 aa13.32□□□□□ -0.28
RPUSD4-205ENST00000530903 EIF4A2Q14240 407 aaKnown RBP13.32□□□□□ -0.28
RPUSD4-205ENST00000530903 TRIM35Q9UPQ4 493 aa13.32□□□□□ -0.28
RPUSD4-205ENST00000530903 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
RPUSD4-205ENST00000530903 HSPA1LP34931 641 aa13.31□□□□□ -0.28
RPUSD4-205ENST00000530903 IL13P35225 146 aa13.31□□□□□ -0.28
RPUSD4-205ENST00000530903 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
RPUSD4-205ENST00000530903 IP6K1Q92551 441 aa13.31□□□□□ -0.28
RPUSD4-205ENST00000530903 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
RPUSD4-205ENST00000530903 CPDO75976 1380 aa13.31□□□□□ -0.28
RPUSD4-205ENST00000530903 U2AF1L5P0DN76 240 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-205ENST00000530903 U2AF1Q01081 240 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPUSD4-205ENST00000530903 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
RPUSD4-205ENST00000530903 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
RPUSD4-205ENST00000530903 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
RPUSD4-205ENST00000530903 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
RPUSD4-205ENST00000530903 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
RPUSD4-205ENST00000530903 JCADQ9P266 1359 aa13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 BLMP54132 1417 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 ABCC6O95255 1503 aa13.29□□□□□ -0.28
RPUSD4-205ENST00000530903 LMO7Q8WWI1 1683 aa13.28□□□□□ -0.28
RPUSD4-205ENST00000530903 HMOX1P09601 288 aa13.27□□□□□ -0.29
RPUSD4-205ENST00000530903 HNRNPUQ00839 825 aaKnown RBP eCLIP13.27□□□□□ -0.29
RPUSD4-205ENST00000530903 COL14A1Q05707 1796 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-205ENST00000530903 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
RPUSD4-205ENST00000530903 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
RPUSD4-205ENST00000530903 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
RPUSD4-205ENST00000530903 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
RPUSD4-205ENST00000530903 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
RPUSD4-205ENST00000530903 EYA1Q99502 592 aa13.26□□□□□ -0.29
RPUSD4-205ENST00000530903 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
RPUSD4-205ENST00000530903 PLCH1Q4KWH8 1693 aa13.25□□□□□ -0.29
RPUSD4-205ENST00000530903 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
RPUSD4-205ENST00000530903 SULT6B1Q6IMI4 303 aa13.24□□□□□ -0.29
RPUSD4-205ENST00000530903 AEBP1Q8IUX7 1158 aa13.24□□□□□ -0.29
RPUSD4-205ENST00000530903 USHBP1Q8N6Y0 703 aa13.24□□□□□ -0.29
RPUSD4-205ENST00000530903 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
RPUSD4-205ENST00000530903 ERBB3P21860 1342 aa13.24□□□□□ -0.29
RPUSD4-205ENST00000530903 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
RPUSD4-205ENST00000530903 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
RPUSD4-205ENST00000530903 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
RPUSD4-205ENST00000530903 LRP6O75581 1613 aa13.23□□□□□ -0.29
RPUSD4-205ENST00000530903 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-205ENST00000530903 FCHSD2O94868 740 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 NBPF6Q5VWK0 638 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 NBPF4Q96M43 638 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 BTG4Q9NY30 223 aa13.22□□□□□ -0.29
RPUSD4-205ENST00000530903 MAPK8IP3Q9UPT6 1336 aa13.21□□□□□ -0.3
RPUSD4-205ENST00000530903 APAF1O14727 1248 aa13.21□□□□□ -0.3
RPUSD4-205ENST00000530903 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.3
RPUSD4-205ENST00000530903 PNNQ9H307 717 aaKnown RBP13.21□□□□□ -0.3
RPUSD4-205ENST00000530903 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
RPUSD4-205ENST00000530903 KDRP35968 1356 aa13.2□□□□□ -0.3
RPUSD4-205ENST00000530903 EVA1CP58658 441 aa13.2□□□□□ -0.3
RPUSD4-205ENST00000530903 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
RPUSD4-205ENST00000530903 NWD2Q9ULI1 1742 aa13.19□□□□□ -0.3
RPUSD4-205ENST00000530903 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
RPUSD4-205ENST00000530903 NEFMP07197 916 aa13.19□□□□□ -0.3
RPUSD4-205ENST00000530903 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
RPUSD4-205ENST00000530903 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
RPUSD4-205ENST00000530903 PHACTR3Q96KR7 559 aa13.19□□□□□ -0.3
RPUSD4-205ENST00000530903 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
RPUSD4-205ENST00000530903 DLG5Q8TDM6 1919 aa13.18□□□□□ -0.3
RPUSD4-205ENST00000530903 FKBP8Q14318 412 aa13.18□□□□□ -0.3
RPUSD4-205ENST00000530903 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
RPUSD4-205ENST00000530903 TOM1L2Q6ZVM7 507 aa13.18□□□□□ -0.3
RPUSD4-205ENST00000530903 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
RPUSD4-205ENST00000530903 ZBED9Q6R2W3 1325 aa13.17□□□□□ -0.3
RPUSD4-205ENST00000530903 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
RPUSD4-205ENST00000530903 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
RPUSD4-205ENST00000530903 SLIT2O94813 1529 aa13.17□□□□□ -0.3
RPUSD4-205ENST00000530903 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
RPUSD4-205ENST00000530903 CRB1P82279 1406 aa13.15□□□□□ -0.3
RPUSD4-205ENST00000530903 ST18O60284 1047 aa13.15□□□□□ -0.3
RPUSD4-205ENST00000530903 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-205ENST00000530903 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms