RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 POLR3EQ9NVU0 708 aa14.2□□□□□ -0.14
CCDC90B-217ENST00000530253 CARD14Q9BXL6 1004 aa14.19□□□□□ -0.14
CCDC90B-217ENST00000530253 PGPEP1Q9NXJ5 209 aa14.19□□□□□ -0.14
CCDC90B-217ENST00000530253 PDXDC2PQ6P474 469 aa14.18□□□□□ -0.14
CCDC90B-217ENST00000530253 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
CCDC90B-217ENST00000530253 SOS2Q07890 1332 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-217ENST00000530253 ZC3H4Q9UPT8 1303 aaKnown RBP14.17□□□□□ -0.14
CCDC90B-217ENST00000530253 LORP23490 312 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-217ENST00000530253 ERFEQ4G0M1 354 aa14.17□□□□□ -0.14
CCDC90B-217ENST00000530253 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
CCDC90B-217ENST00000530253 SLC10A4Q96EP9 437 aa14.16□□□□□ -0.14
CCDC90B-217ENST00000530253 ARHGAP9Q9BRR9 750 aa14.15□□□□□ -0.14
CCDC90B-217ENST00000530253 FKBPLQ9UIM3 349 aa14.15□□□□□ -0.14
CCDC90B-217ENST00000530253 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
CCDC90B-217ENST00000530253 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
CCDC90B-217ENST00000530253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.14□□□□□ -0.15
CCDC90B-217ENST00000530253 PTPRGP23470 1445 aa14.14□□□□□ -0.15
CCDC90B-217ENST00000530253 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
CCDC90B-217ENST00000530253 DHX9Q08211 1270 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-217ENST00000530253 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-217ENST00000530253 DNMT3LQ9UJW3 386 aa14.12□□□□□ -0.15
CCDC90B-217ENST00000530253 ADCY10Q96PN6 1610 aa14.12□□□□□ -0.15
CCDC90B-217ENST00000530253 TTLL8A6PVC2 850 aa14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 CLIP1P30622 1438 aa14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 SH3D19Q5HYK7 790 aa14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 PPP1R26Q5T8A7 1209 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 ZBTB33Q86T24 672 aa14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 PNMA1Q8ND90 353 aa14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 DDRGK1Q96HY6 314 aa14.11□□□□□ -0.15
CCDC90B-217ENST00000530253 ABCA8O94911 1581 aa14.1□□□□□ -0.15
CCDC90B-217ENST00000530253 RANGAP1P46060 587 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-217ENST00000530253 TTBK1Q5TCY1 1321 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-217ENST00000530253 GPSM3Q9Y4H4 160 aa14.09□□□□□ -0.15
CCDC90B-217ENST00000530253 UHRF1BP1LA0JNW5 1464 aa14.09□□□□□ -0.15
CCDC90B-217ENST00000530253 PLB1Q6P1J6 1458 aa14.09□□□□□ -0.15
CCDC90B-217ENST00000530253 UACAQ9BZF9 1416 aa14.08□□□□□ -0.15
CCDC90B-217ENST00000530253 PTK2Q05397 1052 aa14.08□□□□□ -0.16
CCDC90B-217ENST00000530253 Q6ZVU0 165 aa14.08□□□□□ -0.16
CCDC90B-217ENST00000530253 KCTD15Q96SI1 283 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-217ENST00000530253 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-217ENST00000530253 ABCC2Q92887 1545 aa14.08□□□□□ -0.16
CCDC90B-217ENST00000530253 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
CCDC90B-217ENST00000530253 LRRN4Q8WUT4 740 aa14.06□□□□□ -0.16
CCDC90B-217ENST00000530253 SPINT1O43278 529 aa14.04□□□□□ -0.16
CCDC90B-217ENST00000530253 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
CCDC90B-217ENST00000530253 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
CCDC90B-217ENST00000530253 NR6A1Q15406 480 aa14.03□□□□□ -0.16
CCDC90B-217ENST00000530253 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCDC90B-217ENST00000530253 KDM5BQ9UGL1 1544 aa14.02□□□□□ -0.16
CCDC90B-217ENST00000530253 FMN1Q68DA7 1419 aa14.02□□□□□ -0.16
CCDC90B-217ENST00000530253 KDM4CQ9H3R0 1056 aa14.02□□□□□ -0.17
CCDC90B-217ENST00000530253 NUP153P49790 1475 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-217ENST00000530253 PTSQ03393 145 aa14.01□□□□□ -0.17
CCDC90B-217ENST00000530253 CBLBQ13191 982 aa14.01□□□□□ -0.17
CCDC90B-217ENST00000530253 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
CCDC90B-217ENST00000530253 PCF11O94913 1555 aaKnown RBP14□□□□□ -0.17
CCDC90B-217ENST00000530253 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
CCDC90B-217ENST00000530253 AP1G2O75843 785 aa13.99□□□□□ -0.17
CCDC90B-217ENST00000530253 INTS6LQ5JSJ4 861 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-217ENST00000530253 ZCCHC11Q5TAX3 1644 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-217ENST00000530253 MAPKBP1O60336 1514 aa13.98□□□□□ -0.17
CCDC90B-217ENST00000530253 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-217ENST00000530253 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
CCDC90B-217ENST00000530253 NANOS1Q8WY41 292 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-217ENST00000530253 CASKIN1Q8WXD9 1431 aa13.97□□□□□ -0.17
CCDC90B-217ENST00000530253 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
CCDC90B-217ENST00000530253 ATP10BO94823 1461 aa13.96□□□□□ -0.17
CCDC90B-217ENST00000530253 FIGNL2A6NMB9 653 aa13.96□□□□□ -0.17
CCDC90B-217ENST00000530253 FYCO1Q9BQS8 1478 aa13.95□□□□□ -0.18
CCDC90B-217ENST00000530253 CCDC155Q8N6L0 562 aa13.95□□□□□ -0.18
CCDC90B-217ENST00000530253 FAM117AQ9C073 453 aa13.95□□□□□ -0.18
CCDC90B-217ENST00000530253 GPBP1L1Q9HC44 474 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-217ENST00000530253 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
CCDC90B-217ENST00000530253 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
CCDC90B-217ENST00000530253 EPRSP07814 1512 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-217ENST00000530253 CDK13Q14004 1512 aaKnown RBP13.92□□□□□ -0.18
CCDC90B-217ENST00000530253 RELBQ01201 579 aa13.92□□□□□ -0.18
CCDC90B-217ENST00000530253 DZIP3Q86Y13 1208 aaKnown RBP13.92□□□□□ -0.18
CCDC90B-217ENST00000530253 OCSTAMPQ9BR26 566 aa13.92□□□□□ -0.18
CCDC90B-217ENST00000530253 POLMQ9NP87 494 aaPredicted RBP13.92□□□□□ -0.18
CCDC90B-217ENST00000530253 ASXL2Q76L83 1435 aa13.91□□□□□ -0.18
CCDC90B-217ENST00000530253 USP17L8P0C7I0 530 aa13.91□□□□□ -0.18
CCDC90B-217ENST00000530253 FAM69CQ0P6D2 419 aa13.91□□□□□ -0.18
CCDC90B-217ENST00000530253 SLC35F4A4IF30 521 aa13.9□□□□□ -0.18
CCDC90B-217ENST00000530253 RNF225M0QZC1 329 aaPredicted RBP13.9□□□□□ -0.18
CCDC90B-217ENST00000530253 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
CCDC90B-217ENST00000530253 AGBL1Q96MI9 1066 aa13.9□□□□□ -0.18
CCDC90B-217ENST00000530253 CNTNAP3BQ96NU0 1288 aa13.9□□□□□ -0.18
CCDC90B-217ENST00000530253 CNTNAP3Q9BZ76 1288 aa13.9□□□□□ -0.18
CCDC90B-217ENST00000530253 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
CCDC90B-217ENST00000530253 ABCC10Q5T3U5 1492 aa13.89□□□□□ -0.19
CCDC90B-217ENST00000530253 KCNMA1Q12791 1236 aa13.89□□□□□ -0.19
CCDC90B-217ENST00000530253 INSM2Q96T92 566 aaPredicted RBP13.89□□□□□ -0.19
CCDC90B-217ENST00000530253 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
CCDC90B-217ENST00000530253 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
CCDC90B-217ENST00000530253 ADH1AP07327 375 aa13.88□□□□□ -0.19
CCDC90B-217ENST00000530253 ITGA6P23229 1130 aa13.88□□□□□ -0.19
CCDC90B-217ENST00000530253 CTSOP43234 321 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-217ENST00000530253 GPR161Q8N6U8 529 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms