RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 VAC14Q08AM6 782 aa11.34□□□□□ -0.59
SVIP-204ENST00000530199 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
SVIP-204ENST00000530199 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
SVIP-204ENST00000530199 BLOC1S3Q6QNY0 202 aa11.33□□□□□ -0.6
SVIP-204ENST00000530199 RNF19BQ6ZMZ0 732 aa11.33□□□□□ -0.6
SVIP-204ENST00000530199 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
SVIP-204ENST00000530199 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
SVIP-204ENST00000530199 ARHGAP5Q13017 1502 aa11.33□□□□□ -0.6
SVIP-204ENST00000530199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.32□□□□□ -0.6
SVIP-204ENST00000530199 BCAMP50895 628 aa11.32□□□□□ -0.6
SVIP-204ENST00000530199 APLP1P51693 650 aa11.32□□□□□ -0.6
SVIP-204ENST00000530199 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
SVIP-204ENST00000530199 LYPD8Q6UX82 237 aa11.32□□□□□ -0.6
SVIP-204ENST00000530199 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
SVIP-204ENST00000530199 CDK13Q14004 1512 aaKnown RBP11.31□□□□□ -0.6
SVIP-204ENST00000530199 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
SVIP-204ENST00000530199 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
SVIP-204ENST00000530199 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
SVIP-204ENST00000530199 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
SVIP-204ENST00000530199 ABCC1P33527 1531 aa11.3□□□□□ -0.6
SVIP-204ENST00000530199 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
SVIP-204ENST00000530199 SCUBE3Q8IX30 993 aa11.3□□□□□ -0.6
SVIP-204ENST00000530199 ALG2Q9H553 416 aa11.3□□□□□ -0.6
SVIP-204ENST00000530199 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
SVIP-204ENST00000530199 THEMISQ8N1K5 641 aaPredicted RBP11.29□□□□□ -0.6
SVIP-204ENST00000530199 WNT2BQ93097 391 aa11.29□□□□□ -0.6
SVIP-204ENST00000530199 JCADQ9P266 1359 aa11.28□□□□□ -0.6
SVIP-204ENST00000530199 PLXNC1O60486 1568 aa11.28□□□□□ -0.6
SVIP-204ENST00000530199 THAP11Q96EK4 314 aa11.28□□□□□ -0.6
SVIP-204ENST00000530199 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
SVIP-204ENST00000530199 PCDHB3Q9Y5E6 796 aa11.28□□□□□ -0.6
SVIP-204ENST00000530199 NR1I2O75469 434 aa11.27□□□□□ -0.61
SVIP-204ENST00000530199 RXRBP28702 533 aa11.27□□□□□ -0.61
SVIP-204ENST00000530199 TNRQ92752 1358 aa11.27□□□□□ -0.61
SVIP-204ENST00000530199 ITSN2Q9NZM3 1697 aa11.27□□□□□ -0.61
SVIP-204ENST00000530199 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
SVIP-204ENST00000530199 SOX11P35716 441 aa11.26□□□□□ -0.61
SVIP-204ENST00000530199 RETREG2Q8NC44 543 aa11.26□□□□□ -0.61
SVIP-204ENST00000530199 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
SVIP-204ENST00000530199 KIF14Q15058 1648 aa11.26□□□□□ -0.61
SVIP-204ENST00000530199 XIRP1Q702N8 1843 aaKnown RBP11.25□□□□□ -0.61
SVIP-204ENST00000530199 KDM5DQ9BY66 1539 aa11.25□□□□□ -0.61
SVIP-204ENST00000530199 ROBO1Q9Y6N7 1651 aa11.25□□□□□ -0.61
SVIP-204ENST00000530199 CDC42BPBQ9Y5S2 1711 aa11.25□□□□□ -0.61
SVIP-204ENST00000530199 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
SVIP-204ENST00000530199 SETBP1Q9Y6X0 1596 aa11.24□□□□□ -0.61
SVIP-204ENST00000530199 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
SVIP-204ENST00000530199 NLRP1Q9C000 1473 aa11.24□□□□□ -0.61
SVIP-204ENST00000530199 SAMD9LQ8IVG5 1584 aa11.24□□□□□ -0.61
SVIP-204ENST00000530199 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
SVIP-204ENST00000530199 JUNDP17535 347 aa11.23□□□□□ -0.61
SVIP-204ENST00000530199 GGT6Q6P531 493 aa11.23□□□□□ -0.61
SVIP-204ENST00000530199 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
SVIP-204ENST00000530199 WBP1LQ9NX94 342 aa11.23□□□□□ -0.61
SVIP-204ENST00000530199 CDK11AQ9UQ88 783 aaPredicted RBP11.23□□□□□ -0.61
SVIP-204ENST00000530199 SPATA31A6Q5VVP1 1343 aa11.23□□□□□ -0.61
SVIP-204ENST00000530199 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
SVIP-204ENST00000530199 LRP6O75581 1613 aa11.23□□□□□ -0.61
SVIP-204ENST00000530199 ZC3H13Q5T200 1668 aaKnown RBP11.23□□□□□ -0.61
SVIP-204ENST00000530199 F12P00748 615 aaPredicted RBP11.22□□□□□ -0.61
SVIP-204ENST00000530199 A2MP01023 1474 aa11.22□□□□□ -0.61
SVIP-204ENST00000530199 TROQ12816 1431 aaPredicted RBP11.22□□□□□ -0.61
SVIP-204ENST00000530199 PTPRNQ16849 979 aa11.22□□□□□ -0.61
SVIP-204ENST00000530199 IFFO2Q5TF58 517 aa11.22□□□□□ -0.61
SVIP-204ENST00000530199 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
SVIP-204ENST00000530199 PBXIP1Q96AQ6 731 aa11.22□□□□□ -0.61
SVIP-204ENST00000530199 PZPP20742 1482 aa11.21□□□□□ -0.61
SVIP-204ENST00000530199 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.61
SVIP-204ENST00000530199 RFX1P22670 979 aa11.21□□□□□ -0.61
SVIP-204ENST00000530199 SEMA3FQ13275 785 aa11.21□□□□□ -0.61
SVIP-204ENST00000530199 FKBPLQ9UIM3 349 aa11.21□□□□□ -0.61
SVIP-204ENST00000530199 PREX2Q70Z35 1606 aa11.2□□□□□ -0.62
SVIP-204ENST00000530199 ATP7AQ04656 1500 aa11.2□□□□□ -0.62
SVIP-204ENST00000530199 FGD6Q6ZV73 1430 aa11.2□□□□□ -0.62
SVIP-204ENST00000530199 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
SVIP-204ENST00000530199 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
SVIP-204ENST00000530199 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
SVIP-204ENST00000530199 NR1H3Q13133 447 aa11.2□□□□□ -0.62
SVIP-204ENST00000530199 UCN2Q96RP3 112 aa11.2□□□□□ -0.62
SVIP-204ENST00000530199 MIA2Q96PC5 1412 aa11.19□□□□□ -0.62
SVIP-204ENST00000530199 SPAG9O60271 1321 aaKnown RBP11.19□□□□□ -0.62
SVIP-204ENST00000530199 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
SVIP-204ENST00000530199 MAP10Q9P2G4 905 aa11.19□□□□□ -0.62
SVIP-204ENST00000530199 CLIP1P30622 1438 aa11.18□□□□□ -0.62
SVIP-204ENST00000530199 PHLPP1O60346 1717 aa11.18□□□□□ -0.62
SVIP-204ENST00000530199 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
SVIP-204ENST00000530199 FBXO45P0C2W1 286 aa11.18□□□□□ -0.62
SVIP-204ENST00000530199 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
SVIP-204ENST00000530199 RGS12O14924 1447 aa11.18□□□□□ -0.62
SVIP-204ENST00000530199 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
SVIP-204ENST00000530199 ZBBXA8MT70 800 aa11.17□□□□□ -0.62
SVIP-204ENST00000530199 FAM160A2Q8N612 972 aaPredicted RBP11.17□□□□□ -0.62
SVIP-204ENST00000530199 SPSB2Q99619 263 aa11.17□□□□□ -0.62
SVIP-204ENST00000530199 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
SVIP-204ENST00000530199 DXOO77932 396 aaKnown RBP11.16□□□□□ -0.62
SVIP-204ENST00000530199 MEX3CQ5U5Q3 659 aaKnown RBP11.16□□□□□ -0.62
SVIP-204ENST00000530199 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
SVIP-204ENST00000530199 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
SVIP-204ENST00000530199 INO80Q9ULG1 1556 aaPredicted RBP11.16□□□□□ -0.62
SVIP-204ENST00000530199 TMEM94Q12767 1356 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms