RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
CTNND1-224ENST00000530068 BTAF1O14981 1849 aa15.66■□□□□ 0.1
CTNND1-224ENST00000530068 CCNL1Q9UK58 526 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-224ENST00000530068 MSH5O43196 834 aa15.65■□□□□ 0.1
CTNND1-224ENST00000530068 HOXC9P31274 260 aa15.65■□□□□ 0.1
CTNND1-224ENST00000530068 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
CTNND1-224ENST00000530068 MAP3K19Q56UN5 1328 aa15.65■□□□□ 0.1
CTNND1-224ENST00000530068 USP47Q96K76 1375 aa15.64■□□□□ 0.09
CTNND1-224ENST00000530068 NLGN2Q8NFZ4 835 aa15.63■□□□□ 0.09
CTNND1-224ENST00000530068 RAPGEF4Q8WZA2 1011 aa15.63■□□□□ 0.09
CTNND1-224ENST00000530068 KCNQ4P56696 695 aa15.62■□□□□ 0.09
CTNND1-224ENST00000530068 RTL1A6NKG5 1358 aa15.62■□□□□ 0.09
CTNND1-224ENST00000530068 LTN1O94822 1766 aa15.61■□□□□ 0.09
CTNND1-224ENST00000530068 NSD2O96028 1365 aa15.61■□□□□ 0.09
CTNND1-224ENST00000530068 FAM208AQ9UK61 1670 aaKnown RBP15.6■□□□□ 0.09
CTNND1-224ENST00000530068 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
CTNND1-224ENST00000530068 TATP17735 454 aaPredicted RBP15.6■□□□□ 0.09
CTNND1-224ENST00000530068 COL23A1Q86Y22 540 aaPredicted RBP15.6■□□□□ 0.09
CTNND1-224ENST00000530068 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
CTNND1-224ENST00000530068 TONSLQ96HA7 1378 aa15.6■□□□□ 0.09
CTNND1-224ENST00000530068 QSER1Q2KHR3 1735 aa15.6■□□□□ 0.09
CTNND1-224ENST00000530068 YBX3P16989 372 aaKnown RBP eCLIP15.58■□□□□ 0.08
CTNND1-224ENST00000530068 SMARCC1Q92922 1105 aaPredicted RBP15.58■□□□□ 0.08
CTNND1-224ENST00000530068 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
CTNND1-224ENST00000530068 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
CTNND1-224ENST00000530068 TESK2Q96S53 571 aa15.57■□□□□ 0.08
CTNND1-224ENST00000530068 PCDH11XQ9BZA7 1347 aa15.57■□□□□ 0.08
CTNND1-224ENST00000530068 PCDH11YQ9BZA8 1340 aa15.57■□□□□ 0.08
CTNND1-224ENST00000530068 ST20-MTHFSA0A0A6YYL1 179 aa15.56■□□□□ 0.08
CTNND1-224ENST00000530068 IFFO2Q5TF58 517 aa15.56■□□□□ 0.08
CTNND1-224ENST00000530068 MSL1Q68DK7 614 aa15.56■□□□□ 0.08
CTNND1-224ENST00000530068 MEGF6O75095 1541 aa15.56■□□□□ 0.08
CTNND1-224ENST00000530068 COL24A1Q17RW2 1714 aa15.56■□□□□ 0.08
CTNND1-224ENST00000530068 RRS1Q15050 365 aaKnown RBP15.55■□□□□ 0.08
CTNND1-224ENST00000530068 GPBP1L1Q9HC44 474 aaPredicted RBP15.55■□□□□ 0.08
CTNND1-224ENST00000530068 GOLGB1Q14789 3259 aaKnown RBP15.55■□□□□ 0.08
CTNND1-224ENST00000530068 NSD3Q9BZ95 1437 aa15.54■□□□□ 0.08
CTNND1-224ENST00000530068 KIF24Q5T7B8 1368 aa15.54■□□□□ 0.08
CTNND1-224ENST00000530068 FYB1O15117 783 aa15.54■□□□□ 0.08
CTNND1-224ENST00000530068 FBLN1P23142 703 aa15.54■□□□□ 0.08
CTNND1-224ENST00000530068 AK7Q96M32 723 aa15.54■□□□□ 0.08
CTNND1-224ENST00000530068 INSRP06213 1382 aa15.53■□□□□ 0.08
CTNND1-224ENST00000530068 PALLDQ8WX93 1383 aa15.53■□□□□ 0.08
CTNND1-224ENST00000530068 USHBP1Q8N6Y0 703 aa15.53■□□□□ 0.08
CTNND1-224ENST00000530068 ATP10DQ9P241 1426 aa15.52■□□□□ 0.08
CTNND1-224ENST00000530068 TMF1P82094 1093 aa15.52■□□□□ 0.08
CTNND1-224ENST00000530068 CDCA8Q53HL2 280 aa15.52■□□□□ 0.08
CTNND1-224ENST00000530068 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
CTNND1-224ENST00000530068 GGNBP2Q9H3C7 697 aa15.52■□□□□ 0.08
CTNND1-224ENST00000530068 LY75O60449 1722 aa15.51■□□□□ 0.07
CTNND1-224ENST00000530068 FLT4P35916 1363 aa15.51■□□□□ 0.07
CTNND1-224ENST00000530068 DOT1LQ8TEK3 1739 aa15.51■□□□□ 0.07
CTNND1-224ENST00000530068 CEP350Q5VT06 3117 aa15.5■□□□□ 0.07
CTNND1-224ENST00000530068 SHANK3Q9BYB0 1731 aa15.5■□□□□ 0.07
CTNND1-224ENST00000530068 CYP27B1O15528 508 aa15.49■□□□□ 0.07
CTNND1-224ENST00000530068 SSFA2P28290 1259 aa15.49■□□□□ 0.07
CTNND1-224ENST00000530068 HSP90AB2PQ58FF8 381 aa15.49■□□□□ 0.07
CTNND1-224ENST00000530068 SPG7Q9UQ90 795 aa15.49■□□□□ 0.07
CTNND1-224ENST00000530068 HSPA6P17066 643 aa15.48■□□□□ 0.07
CTNND1-224ENST00000530068 TUBGCP6Q96RT7 1819 aa15.47■□□□□ 0.07
CTNND1-224ENST00000530068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.47■□□□□ 0.07
CTNND1-224ENST00000530068 NKX1-1Q15270 411 aaPredicted RBP15.47■□□□□ 0.07
CTNND1-224ENST00000530068 ADCY9O60503 1353 aa15.47■□□□□ 0.07
CTNND1-224ENST00000530068 IGSF1Q8N6C5 1336 aa15.46■□□□□ 0.07
CTNND1-224ENST00000530068 PIGBQ92521 554 aa15.46■□□□□ 0.07
CTNND1-224ENST00000530068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.074e-10■□□□□ 10.2
CTNND1-224ENST00000530068 LOC102724428A0A0B4J2F2 783 aa15.45■□□□□ 0.06
CTNND1-224ENST00000530068 PHF14O94880 888 aa15.45■□□□□ 0.06
CTNND1-224ENST00000530068 SIK1P57059 783 aa15.45■□□□□ 0.06
CTNND1-224ENST00000530068 ZNF526Q8TF50 670 aaPredicted RBP15.44■□□□□ 0.06
CTNND1-224ENST00000530068 TMOD3Q9NYL9 352 aa15.44■□□□□ 0.06
CTNND1-224ENST00000530068 C5P01031 1676 aa15.42■□□□□ 0.06
CTNND1-224ENST00000530068 GNPATO15228 680 aa15.41■□□□□ 0.06
CTNND1-224ENST00000530068 IFNL2Q8IZJ0 200 aa15.41■□□□□ 0.06
CTNND1-224ENST00000530068 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
CTNND1-224ENST00000530068 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
CTNND1-224ENST00000530068 RGPD2P0DJD1 1756 aa15.4■□□□□ 0.06
CTNND1-224ENST00000530068 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
CTNND1-224ENST00000530068 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
CTNND1-224ENST00000530068 TGFB2P61812 414 aa15.4■□□□□ 0.06
CTNND1-224ENST00000530068 NLGN1Q8N2Q7 840 aa15.4■□□□□ 0.06
CTNND1-224ENST00000530068 LINC00116Q8NCU8 138 aa15.4■□□□□ 0.06
CTNND1-224ENST00000530068 C4BP0C0L5 1744 aa15.4■□□□□ 0.06
CTNND1-224ENST00000530068 AMIGO3Q86WK7 504 aa15.39■□□□□ 0.05
CTNND1-224ENST00000530068 NCAPD2Q15021 1401 aa15.39■□□□□ 0.05
CTNND1-224ENST00000530068 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
CTNND1-224ENST00000530068 MMP10P09238 476 aa15.38■□□□□ 0.05
CTNND1-224ENST00000530068 APLP1P51693 650 aa15.38■□□□□ 0.05
CTNND1-224ENST00000530068 EYA1Q99502 592 aa15.38■□□□□ 0.05
CTNND1-224ENST00000530068 ASAP1Q9ULH1 1129 aa15.38■□□□□ 0.05
CTNND1-224ENST00000530068 RTCBQ9Y3I0 505 aaKnown RBP15.38■□□□□ 0.05
CTNND1-224ENST00000530068 KIF3CO14782 793 aa15.37■□□□□ 0.05
CTNND1-224ENST00000530068 PHKG2P15735 406 aa15.37■□□□□ 0.05
CTNND1-224ENST00000530068 ADRA2BP18089 450 aa15.37■□□□□ 0.05
CTNND1-224ENST00000530068 TRAPPC3LQ5T215 181 aa15.37■□□□□ 0.05
CTNND1-224ENST00000530068 CARD14Q9BXL6 1004 aa15.37■□□□□ 0.05
CTNND1-224ENST00000530068 WWC3Q9ULE0 1092 aa15.37■□□□□ 0.05
CTNND1-224ENST00000530068 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
CTNND1-224ENST00000530068 ITPK1Q13572 414 aa15.36■□□□□ 0.05
CTNND1-224ENST00000530068 RC3H1Q5TC82 1133 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms