RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 TNS2Q63HR2 1409 aa15.25■□□□□ 0.03
CHD7-209ENST00000529472 KDRP35968 1356 aa15.24■□□□□ 0.03
CHD7-209ENST00000529472 DDB1Q16531 1140 aa15.24■□□□□ 0.03
CHD7-209ENST00000529472 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHD7-209ENST00000529472 PKD1L3Q7Z443 1732 aa15.23■□□□□ 0.03
CHD7-209ENST00000529472 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
CHD7-209ENST00000529472 MIER1Q8N108 512 aa15.22■□□□□ 0.03
CHD7-209ENST00000529472 EXOC5O00471 708 aa15.21■□□□□ 0.03
CHD7-209ENST00000529472 PDE3BQ13370 1112 aa15.21■□□□□ 0.03
CHD7-209ENST00000529472 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
CHD7-209ENST00000529472 PRKAR2BP31323 418 aa15.2■□□□□ 0.02
CHD7-209ENST00000529472 FAM182BQ5T319 152 aa15.2■□□□□ 0.02
CHD7-209ENST00000529472 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
CHD7-209ENST00000529472 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
CHD7-209ENST00000529472 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
CHD7-209ENST00000529472 ILDR2Q71H61 639 aa15.19■□□□□ 0.02
CHD7-209ENST00000529472 SPG7Q9UQ90 795 aa15.19■□□□□ 0.02
CHD7-209ENST00000529472 FCHSD2O94868 740 aa15.18■□□□□ 0.02
CHD7-209ENST00000529472 ADAMTS8Q9UP79 889 aa15.18■□□□□ 0.02
CHD7-209ENST00000529472 PCDH11XQ9BZA7 1347 aa15.17■□□□□ 0.02
CHD7-209ENST00000529472 PCDH11YQ9BZA8 1340 aa15.17■□□□□ 0.02
CHD7-209ENST00000529472 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
CHD7-209ENST00000529472 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
CHD7-209ENST00000529472 MARCH10Q8NA82 808 aaPredicted RBP15.17■□□□□ 0.02
CHD7-209ENST00000529472 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
CHD7-209ENST00000529472 ZNF530Q6P9A1 599 aaPredicted RBP15.16■□□□□ 0.02
CHD7-209ENST00000529472 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
CHD7-209ENST00000529472 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
CHD7-209ENST00000529472 PHACTR3Q96KR7 559 aa15.16■□□□□ 0.02
CHD7-209ENST00000529472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.021e-6■■□□□ 14.3
CHD7-209ENST00000529472 CYP27B1O15528 508 aa15.15■□□□□ 0.02
CHD7-209ENST00000529472 AMOTQ4VCS5 1084 aa15.15■□□□□ 0.02
CHD7-209ENST00000529472 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
CHD7-209ENST00000529472 NEFMP07197 916 aa15.14■□□□□ 0.01
CHD7-209ENST00000529472 MTHFSDQ2M296 383 aaKnown RBP15.14■□□□□ 0.01
CHD7-209ENST00000529472 FAM9BQ8IZU0 186 aa15.14■□□□□ 0.01
CHD7-209ENST00000529472 PLEKHF1Q96S99 279 aa15.14■□□□□ 0.01
CHD7-209ENST00000529472 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
CHD7-209ENST00000529472 PHKG2P15735 406 aa15.13■□□□□ 0.01
CHD7-209ENST00000529472 C1orf141Q5JVX7 400 aa15.13■□□□□ 0.01
CHD7-209ENST00000529472 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
CHD7-209ENST00000529472 DOT1LQ8TEK3 1739 aa15.13■□□□□ 0.01
CHD7-209ENST00000529472 GAS2L2Q8NHY3 880 aa15.12■□□□□ 0.01
CHD7-209ENST00000529472 SBF2Q86WG5 1849 aa15.11■□□□□ 0.01
CHD7-209ENST00000529472 FAM196AQ6ZSG2 479 aa15.11■□□□□ 0.01
CHD7-209ENST00000529472 KAT6BQ8WYB5 2073 aa15.11■□□□□ 0.01
CHD7-209ENST00000529472 TOGARAM1Q9Y4F4 1720 aa15.11■□□□□ 0.01
CHD7-209ENST00000529472 AKAP4Q5JQC9 854 aa15.1■□□□□ 0.01
CHD7-209ENST00000529472 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
CHD7-209ENST00000529472 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
CHD7-209ENST00000529472 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
CHD7-209ENST00000529472 MAP3K5Q99683 1374 aa15.1■□□□□ 0.01
CHD7-209ENST00000529472 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
CHD7-209ENST00000529472 MPRIPQ6WCQ1 1025 aa15.09■□□□□ 0.01
CHD7-209ENST00000529472 NHSQ6T4R5 1651 aa15.09■□□□□ 0.01
CHD7-209ENST00000529472 BCL9O00512 1426 aa15.09■□□□□ 0.01
CHD7-209ENST00000529472 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
CHD7-209ENST00000529472 TRIM37O94972 964 aa15.08■□□□□ 0
CHD7-209ENST00000529472 HSP90AB1P08238 724 aaKnown RBP15.08■□□□□ 0
CHD7-209ENST00000529472 NFE2L2Q16236 605 aa15.08■□□□□ 0
CHD7-209ENST00000529472 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
CHD7-209ENST00000529472 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
CHD7-209ENST00000529472 SCN11AQ9UI33 1791 aa15.08■□□□□ 0
CHD7-209ENST00000529472 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
CHD7-209ENST00000529472 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
CHD7-209ENST00000529472 NKX1-1Q15270 411 aaPredicted RBP15.07■□□□□ 0
CHD7-209ENST00000529472 DCAF5Q96JK2 942 aa15.07■□□□□ 0
CHD7-209ENST00000529472 ITGB4P16144 1822 aa15.06■□□□□ 0
CHD7-209ENST00000529472 KCNQ2O43526 872 aa15.06■□□□□ 0
CHD7-209ENST00000529472 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
CHD7-209ENST00000529472 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
CHD7-209ENST00000529472 NEUROD2Q15784 382 aa15.06■□□□□ 0
CHD7-209ENST00000529472 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
CHD7-209ENST00000529472 APAF1O14727 1248 aa15.05■□□□□ -0
CHD7-209ENST00000529472 RIPK4P57078 832 aa15.05■□□□□ -0
CHD7-209ENST00000529472 PTF1AQ7RTS3 328 aa15.05■□□□□ -0
CHD7-209ENST00000529472 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
CHD7-209ENST00000529472 LGR6Q9HBX8 967 aa15.05■□□□□ -0
CHD7-209ENST00000529472 BTAF1O14981 1849 aa15.04■□□□□ -0
CHD7-209ENST00000529472 ADAMTS7Q9UKP4 1686 aa15.04■□□□□ -0
CHD7-209ENST00000529472 MCM10Q7L590 875 aa15.04■□□□□ -0
CHD7-209ENST00000529472 RNMTO43148 476 aaKnown RBP15.03■□□□□ -0
CHD7-209ENST00000529472 DCTN1Q14203 1278 aa15.03■□□□□ -0
CHD7-209ENST00000529472 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
CHD7-209ENST00000529472 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
CHD7-209ENST00000529472 MRC1P22897 1456 aa15.02■□□□□ -0
CHD7-209ENST00000529472 ERVV-2B6SEH9 535 aa15.02■□□□□ -0
CHD7-209ENST00000529472 CABP4P57796 275 aa15.02■□□□□ -0
CHD7-209ENST00000529472 IL17REQ8NFR9 667 aa15.02■□□□□ -0
CHD7-209ENST00000529472 THUMPD2Q9BTF0 503 aaKnown RBP15.02■□□□□ -0
CHD7-209ENST00000529472 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
CHD7-209ENST00000529472 SF3B2Q13435 895 aaKnown RBP15.01□□□□□ -0.01
CHD7-209ENST00000529472 UPF1Q92900 1129 aaKnown RBP eCLIP15.01□□□□□ -0.01
CHD7-209ENST00000529472 CEMIPQ8WUJ3 1361 aa15□□□□□ -0.01
CHD7-209ENST00000529472 HTATSF1O43719 755 aaKnown RBP15□□□□□ -0.01
CHD7-209ENST00000529472 APBA3O96018 575 aa15□□□□□ -0.01
CHD7-209ENST00000529472 TEFQ10587 303 aa15□□□□□ -0.01
CHD7-209ENST00000529472 NFATC2IPQ8NCF5 419 aa15□□□□□ -0.01
CHD7-209ENST00000529472 PIGBQ92521 554 aa15□□□□□ -0.01
CHD7-209ENST00000529472 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms