RNA–Protein interactions for RNA: ENST00000528819.1

XRRA1-209, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 1 (best)

Gene XRRA1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-209ENST00000528819 NUDCQ9Y266 331 aa10.47□□□□□ -0.73
XRRA1-209ENST00000528819 U2AF1L5P0DN76 240 aaPredicted RBP10.46□□□□□ -0.73
XRRA1-209ENST00000528819 U2AF1Q01081 240 aaKnown RBP eCLIP10.46□□□□□ -0.73
XRRA1-209ENST00000528819 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
XRRA1-209ENST00000528819 KRT27Q7Z3Y8 459 aa10.46□□□□□ -0.73
XRRA1-209ENST00000528819 AEBP1Q8IUX7 1158 aa10.46□□□□□ -0.73
XRRA1-209ENST00000528819 CDCA7Q9BWT1 371 aaPredicted RBP10.46□□□□□ -0.73
XRRA1-209ENST00000528819 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
XRRA1-209ENST00000528819 RGPD2P0DJD1 1756 aa10.44□□□□□ -0.74
XRRA1-209ENST00000528819 IGSF1Q8N6C5 1336 aa10.44□□□□□ -0.74
XRRA1-209ENST00000528819 ZCRB1Q8TBF4 217 aaKnown RBP10.44□□□□□ -0.74
XRRA1-209ENST00000528819 MEGF6O75095 1541 aa10.43□□□□□ -0.74
XRRA1-209ENST00000528819 WDR43Q15061 677 aaKnown RBP eCLIP10.43□□□□□ -0.74
XRRA1-209ENST00000528819 FAM208AQ9UK61 1670 aaKnown RBP10.43□□□□□ -0.74
XRRA1-209ENST00000528819 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
XRRA1-209ENST00000528819 DISP2A7MBM2 1401 aa10.42□□□□□ -0.74
XRRA1-209ENST00000528819 CCDC184Q52MB2 194 aa10.42□□□□□ -0.74
XRRA1-209ENST00000528819 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
XRRA1-209ENST00000528819 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
XRRA1-209ENST00000528819 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
XRRA1-209ENST00000528819 THSD7AQ9UPZ6 1657 aa10.41□□□□□ -0.74
XRRA1-209ENST00000528819 PRKAR2BP31323 418 aa10.41□□□□□ -0.74
XRRA1-209ENST00000528819 PLEKHO1Q53GL0 409 aaPredicted RBP10.41□□□□□ -0.74
XRRA1-209ENST00000528819 ACSBG1Q96GR2 724 aa10.41□□□□□ -0.74
XRRA1-209ENST00000528819 NEFMP07197 916 aa10.4□□□□□ -0.74
XRRA1-209ENST00000528819 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
XRRA1-209ENST00000528819 SPINK5Q9NQ38 1064 aaPredicted RBP10.4□□□□□ -0.74
XRRA1-209ENST00000528819 OVOS2A0A0G2JMS6 1433 aa10.4□□□□□ -0.75
XRRA1-209ENST00000528819 TNS2Q63HR2 1409 aa10.4□□□□□ -0.75
XRRA1-209ENST00000528819 LRRC37A3O60309 1634 aa10.4□□□□□ -0.75
XRRA1-209ENST00000528819 PCDH11XQ9BZA7 1347 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 PCDH11YQ9BZA8 1340 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 CAPN15O75808 1086 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 C1orf141Q5JVX7 400 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 CCDC146Q8IYE0 955 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 SYTL4Q96C24 671 aaPredicted RBP10.39□□□□□ -0.75
XRRA1-209ENST00000528819 BRWD3Q6RI45 1802 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 WNK3Q9BYP7 1800 aa10.39□□□□□ -0.75
XRRA1-209ENST00000528819 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
XRRA1-209ENST00000528819 TRIM37O94972 964 aa10.38□□□□□ -0.75
XRRA1-209ENST00000528819 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
XRRA1-209ENST00000528819 AMOTQ4VCS5 1084 aa10.38□□□□□ -0.75
XRRA1-209ENST00000528819 RSPH6AQ9H0K4 717 aa10.38□□□□□ -0.75
XRRA1-209ENST00000528819 PARP4Q9UKK3 1724 aaKnown RBP10.38□□□□□ -0.75
XRRA1-209ENST00000528819 MAPK8IP3Q9UPT6 1336 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 CYP27B1O15528 508 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 FCHSD2O94868 740 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 NCAPD2Q15021 1401 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 MTHFSDQ2M296 383 aaKnown RBP10.37□□□□□ -0.75
XRRA1-209ENST00000528819 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 FAM9BQ8IZU0 186 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 MIER1Q8N108 512 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 PHACTR3Q96KR7 559 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
XRRA1-209ENST00000528819 RGPD1P0DJD0 1748 aa10.36□□□□□ -0.75
XRRA1-209ENST00000528819 KCNQ2O43526 872 aa10.36□□□□□ -0.75
XRRA1-209ENST00000528819 PHKG2P15735 406 aa10.36□□□□□ -0.75
XRRA1-209ENST00000528819 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
XRRA1-209ENST00000528819 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
XRRA1-209ENST00000528819 KDRP35968 1356 aa10.36□□□□□ -0.75
XRRA1-209ENST00000528819 APBA3O96018 575 aa10.35□□□□□ -0.75
XRRA1-209ENST00000528819 PRIM1P49642 420 aaKnown RBP10.35□□□□□ -0.75
XRRA1-209ENST00000528819 NEUROD2Q15784 382 aa10.35□□□□□ -0.75
XRRA1-209ENST00000528819 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
XRRA1-209ENST00000528819 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.75
XRRA1-209ENST00000528819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.752e-9■■□□□ 14.4
XRRA1-209ENST00000528819 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
XRRA1-209ENST00000528819 AKAP4Q5JQC9 854 aa10.34□□□□□ -0.75
XRRA1-209ENST00000528819 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
XRRA1-209ENST00000528819 RRP7AQ9Y3A4 280 aaKnown RBP10.34□□□□□ -0.75
XRRA1-209ENST00000528819 SOCS7O14512 581 aa10.33□□□□□ -0.76
XRRA1-209ENST00000528819 DSG3P32926 999 aa10.33□□□□□ -0.76
XRRA1-209ENST00000528819 DEFB132Q7Z7B7 95 aa10.33□□□□□ -0.76
XRRA1-209ENST00000528819 RTF1Q92541 710 aaKnown RBP10.33□□□□□ -0.76
XRRA1-209ENST00000528819 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
XRRA1-209ENST00000528819 GNAT3A8MTJ3 354 aa10.32□□□□□ -0.76
XRRA1-209ENST00000528819 CABP4P57796 275 aa10.32□□□□□ -0.76
XRRA1-209ENST00000528819 PNISRQ8TF01 805 aaKnown RBP10.32□□□□□ -0.76
XRRA1-209ENST00000528819 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
XRRA1-209ENST00000528819 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
XRRA1-209ENST00000528819 LGR6Q9HBX8 967 aa10.32□□□□□ -0.76
XRRA1-209ENST00000528819 SALL2Q9Y467 1007 aaPredicted RBP10.32□□□□□ -0.76
XRRA1-209ENST00000528819 MAP3K5Q99683 1374 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 PKD1L3Q7Z443 1732 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 SHANK3Q9BYB0 1731 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
XRRA1-209ENST00000528819 BAG6P46379 1132 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 RIPK4P57078 832 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
XRRA1-209ENST00000528819 DCTN1Q14203 1278 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 NFE2L2Q16236 605 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 MCM10Q7L590 875 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 DCAF5Q96JK2 942 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 TMOD3Q9NYL9 352 aa10.31□□□□□ -0.76
XRRA1-209ENST00000528819 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
XRRA1-209ENST00000528819 APAF1O14727 1248 aa10.3□□□□□ -0.76
XRRA1-209ENST00000528819 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
XRRA1-209ENST00000528819 TMPOP42166 694 aaKnown RBP10.29□□□□□ -0.76
XRRA1-209ENST00000528819 TEFQ10587 303 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms