RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 KCNH5Q8NCM2 988 aa10□□□□□ -0.81
PTP4A2-210ENST00000528253 USP19O94966 1318 aa10□□□□□ -0.81
PTP4A2-210ENST00000528253 NINLQ9Y2I6 1382 aa10□□□□□ -0.81
PTP4A2-210ENST00000528253 SSH2Q76I76 1423 aa9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 BRWD3Q6RI45 1802 aa9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 ZBTB7CA1YPR0 619 aa9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 SOX12O15370 315 aa9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 MFRPQ9BY79 579 aa9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 RGS12O14924 1447 aa9.99□□□□□ -0.81
PTP4A2-210ENST00000528253 RGPD5Q99666 1765 aa9.98□□□□□ -0.81
PTP4A2-210ENST00000528253 GLI3P10071 1580 aa9.98□□□□□ -0.81
PTP4A2-210ENST00000528253 NRKQ7Z2Y5 1582 aa9.98□□□□□ -0.81
PTP4A2-210ENST00000528253 STRN4Q9NRL3 753 aa9.98□□□□□ -0.81
PTP4A2-210ENST00000528253 CPDO75976 1380 aa9.98□□□□□ -0.81
PTP4A2-210ENST00000528253 CD163L1Q9NR16 1453 aa9.98□□□□□ -0.81
PTP4A2-210ENST00000528253 A0A0G2JS52 829 aa9.97□□□□□ -0.81
PTP4A2-210ENST00000528253 MYT1Q01538 1121 aa9.97□□□□□ -0.81
PTP4A2-210ENST00000528253 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
PTP4A2-210ENST00000528253 SLIT3O75094 1523 aa9.97□□□□□ -0.81
PTP4A2-210ENST00000528253 ONECUT3O60422 494 aaPredicted RBP9.96□□□□□ -0.82
PTP4A2-210ENST00000528253 SEPT12Q8IYM1 358 aa9.96□□□□□ -0.82
PTP4A2-210ENST00000528253 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.82
PTP4A2-210ENST00000528253 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.829e-11■■□□□ 11.4
PTP4A2-210ENST00000528253 WDR70Q9NW82 654 aa9.96□□□□□ -0.82
PTP4A2-210ENST00000528253 A0A1W2PP64 1363 aa9.96□□□□□ -0.82
PTP4A2-210ENST00000528253 LTN1O94822 1766 aa9.96□□□□□ -0.82
PTP4A2-210ENST00000528253 EP400Q96L91 3159 aa9.96□□□□□ -0.82
PTP4A2-210ENST00000528253 FAM98CQ17RN3 349 aaKnown RBP9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 NME9Q86XW9 330 aa9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 POLR3GLQ9BT43 218 aa9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 SPATA31A5Q5VU36 1347 aa9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 SPATA31A7Q8IWB4 1347 aa9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 USP31Q70CQ4 1352 aa9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 USP54Q70EL1 1684 aa9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
PTP4A2-210ENST00000528253 COL18A1P39060 1754 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 LMO7Q8WWI1 1683 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 AATKQ6ZMQ8 1374 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 ANKRD36BQ8N2N9 1353 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 HSPA5P11021 654 aaKnown RBP9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 ARHGEF25Q86VW2 580 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
PTP4A2-210ENST00000528253 SPATA31A1Q5TZJ5 1347 aa9.93□□□□□ -0.82
PTP4A2-210ENST00000528253 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
PTP4A2-210ENST00000528253 KRT27Q7Z3Y8 459 aa9.93□□□□□ -0.82
PTP4A2-210ENST00000528253 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
PTP4A2-210ENST00000528253 COG3Q96JB2 828 aa9.93□□□□□ -0.82
PTP4A2-210ENST00000528253 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
PTP4A2-210ENST00000528253 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
PTP4A2-210ENST00000528253 THRAP3Q9Y2W1 955 aaKnown RBP9.92□□□□□ -0.82
PTP4A2-210ENST00000528253 COL5A2P05997 1499 aaPredicted RBP9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 KAT6BQ8WYB5 2073 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 MYOM1P52179 1685 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 TCP11L2Q8N4U5 519 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 NFAT5O94916 1531 aa9.91□□□□□ -0.82
PTP4A2-210ENST00000528253 FYB1O15117 783 aa9.9□□□□□ -0.82
PTP4A2-210ENST00000528253 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.82
PTP4A2-210ENST00000528253 CRB1P82279 1406 aa9.9□□□□□ -0.83
PTP4A2-210ENST00000528253 MAP2P11137 1827 aaKnown RBP9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 WDR17Q8IZU2 1322 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 ABCC6O95255 1503 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 TMEM106CQ9BVX2 250 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 GGNBP2Q9H3C7 697 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 THSD7AQ9UPZ6 1657 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 OVOS2A0A0J9YW53 1432 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 OVOS2Q6IE36 1432 aa9.89□□□□□ -0.83
PTP4A2-210ENST00000528253 AMPHP49418 695 aa9.88□□□□□ -0.83
PTP4A2-210ENST00000528253 IP6K1Q92551 441 aa9.87□□□□□ -0.83
PTP4A2-210ENST00000528253 CDCA7Q9BWT1 371 aaPredicted RBP9.87□□□□□ -0.83
PTP4A2-210ENST00000528253 CARD10Q9BWT7 1032 aa9.87□□□□□ -0.83
PTP4A2-210ENST00000528253 CARD14Q9BXL6 1004 aa9.87□□□□□ -0.83
PTP4A2-210ENST00000528253 NSD3Q9BZ95 1437 aa9.87□□□□□ -0.83
PTP4A2-210ENST00000528253 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
PTP4A2-210ENST00000528253 WNK3Q9BYP7 1800 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 CGNL1Q0VF96 1302 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 BLMP54132 1417 aaPredicted RBP9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 MKRN3Q13064 507 aaKnown RBP9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 FAM182BQ5T319 152 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 FAM196AQ6ZSG2 479 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 SLAIN1Q8ND83 568 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 ANKRD24Q8TF21 1146 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 PANK3Q9H999 370 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 NLRP2Q9NX02 1062 aa9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 COLQQ9Y215 455 aaPredicted RBP9.86□□□□□ -0.83
PTP4A2-210ENST00000528253 RGPD1P0DJD0 1748 aa9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 FBLN1P23142 703 aa9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 DDB1Q16531 1140 aa9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 LTV1Q96GA3 475 aaPredicted RBP9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 BMP2KQ9NSY1 1161 aaPredicted RBP9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 FAM208AQ9UK61 1670 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms