RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TRIM22Q8IYM9 498 aa7.19□□□□□ -1.26
CLNS1A-209ENST00000527299 BEND7Q8N7W2 519 aaPredicted RBP7.19□□□□□ -1.26
CLNS1A-209ENST00000527299 SPOCK3Q9BQ16 436 aa7.19□□□□□ -1.26
CLNS1A-209ENST00000527299 IGF1RP08069 1367 aa7.19□□□□□ -1.26
CLNS1A-209ENST00000527299 PRICKLE2Q7Z3G6 844 aa7.18□□□□□ -1.26
CLNS1A-209ENST00000527299 PROCP04070 461 aa7.17□□□□□ -1.26
CLNS1A-209ENST00000527299 BCRP11274 1271 aa7.17□□□□□ -1.26
CLNS1A-209ENST00000527299 RHOQP17081 205 aa7.17□□□□□ -1.26
CLNS1A-209ENST00000527299 DBN1Q16643 649 aa7.17□□□□□ -1.26
CLNS1A-209ENST00000527299 EPS8L1Q8TE68 723 aa7.17□□□□□ -1.26
CLNS1A-209ENST00000527299 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.17□□□□□ -1.26
CLNS1A-209ENST00000527299 GPR25O00155 361 aa7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 SKIV2LQ15477 1246 aaKnown RBP7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 FOXR1Q6PIV2 292 aa7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 DZIP3Q86Y13 1208 aaKnown RBP7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 ACDQ96AP0 544 aa7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 SLC24A3Q9HC58 644 aa7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 LRRC4BQ9NT99 713 aa7.16□□□□□ -1.26
CLNS1A-209ENST00000527299 GPC1P35052 558 aa7.15□□□□□ -1.26
CLNS1A-209ENST00000527299 PODNQ7Z5L7 613 aa7.15□□□□□ -1.26
CLNS1A-209ENST00000527299 NEDD1Q8NHV4 660 aa7.15□□□□□ -1.26
CLNS1A-209ENST00000527299 CYLDQ9NQC7 956 aa7.15□□□□□ -1.26
CLNS1A-209ENST00000527299 PROCA1Q8NCQ7 364 aaPredicted RBP7.14□□□□□ -1.27
CLNS1A-209ENST00000527299 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
CLNS1A-209ENST00000527299 DYRK1BQ9Y463 629 aa7.14□□□□□ -1.27
CLNS1A-209ENST00000527299 H7C1W4 665 aa7.13□□□□□ -1.27
CLNS1A-209ENST00000527299 AP1G2O75843 785 aa7.13□□□□□ -1.27
CLNS1A-209ENST00000527299 SH3D19Q5HYK7 790 aa7.13□□□□□ -1.27
CLNS1A-209ENST00000527299 RIPOR1Q6ZS17 1223 aa7.13□□□□□ -1.27
CLNS1A-209ENST00000527299 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
CLNS1A-209ENST00000527299 HMX1Q9NP08 348 aaPredicted RBP7.13□□□□□ -1.27
CLNS1A-209ENST00000527299 ATP5J2-PTCD1G3V325 749 aa7.12□□□□□ -1.27
CLNS1A-209ENST00000527299 GTPBP3Q969Y2 492 aaKnown RBP7.12□□□□□ -1.27
CLNS1A-209ENST00000527299 TRERF1Q96PN7 1200 aa7.11□□□□□ -1.27
CLNS1A-209ENST00000527299 A0A1W2PRU2 124 aa7.1□□□□□ -1.27
CLNS1A-209ENST00000527299 OIP5O43482 229 aa7.1□□□□□ -1.27
CLNS1A-209ENST00000527299 MX2P20592 715 aa7.1□□□□□ -1.27
CLNS1A-209ENST00000527299 POU4F2Q12837 409 aa7.1□□□□□ -1.27
CLNS1A-209ENST00000527299 GALNT6Q8NCL4 622 aa7.1□□□□□ -1.27
CLNS1A-209ENST00000527299 MEN1O00255 615 aa7.09□□□□□ -1.27
CLNS1A-209ENST00000527299 USP17L8P0C7I0 530 aa7.09□□□□□ -1.27
CLNS1A-209ENST00000527299 GAS2L1Q99501 681 aaPredicted RBP7.09□□□□□ -1.27
CLNS1A-209ENST00000527299 GRIP2Q9C0E4 1043 aa7.09□□□□□ -1.27
CLNS1A-209ENST00000527299 NSFL1CQ9UNZ2 370 aaKnown RBP7.09□□□□□ -1.27
CLNS1A-209ENST00000527299 K7ELQ4 463 aaPredicted RBP7.08□□□□□ -1.28
CLNS1A-209ENST00000527299 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
CLNS1A-209ENST00000527299 ERVK-9P63128 1117 aa7.08□□□□□ -1.28
CLNS1A-209ENST00000527299 WDR44Q5JSH3 913 aa7.08□□□□□ -1.28
CLNS1A-209ENST00000527299 KRBA1A5PL33 1030 aa7.07□□□□□ -1.28
CLNS1A-209ENST00000527299 SPATA31C2B4DYI2 1134 aa7.07□□□□□ -1.28
CLNS1A-209ENST00000527299 NBPF10Q6P3W6 841 aaKnown RBP7.07□□□□□ -1.28
CLNS1A-209ENST00000527299 CCDC125Q86Z20 511 aa7.07□□□□□ -1.28
CLNS1A-209ENST00000527299 NBPF15Q8N660 670 aa7.07□□□□□ -1.28
CLNS1A-209ENST00000527299 BAG6P46379 1132 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 MAP2K3P46734 347 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 SNRPNP63162 240 aaKnown RBP7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 CLN3Q13286 438 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 SLC27A3Q5K4L6 730 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 CC2D2BQ6DHV5 1058 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 NLRP3Q96P20 1036 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 OXCT2Q9BYC2 517 aaPredicted RBP7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 TRIM34Q9BYJ4 488 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
CLNS1A-209ENST00000527299 F11P03951 625 aa7.05□□□□□ -1.28
CLNS1A-209ENST00000527299 ALYREFQ86V81 257 aaKnown RBP7.05□□□□□ -1.28
CLNS1A-209ENST00000527299 DDRGK1Q96HY6 314 aa7.05□□□□□ -1.28
CLNS1A-209ENST00000527299 CFHR5Q9BXR6 569 aa7.05□□□□□ -1.28
CLNS1A-209ENST00000527299 NUCKS1Q9H1E3 243 aaKnown RBP7.05□□□□□ -1.28
CLNS1A-209ENST00000527299 ATP1B4Q9UN42 357 aaPredicted RBP7.05□□□□□ -1.28
CLNS1A-209ENST00000527299 ZBBXA8MT70 800 aa7.04□□□□□ -1.28
CLNS1A-209ENST00000527299 SHISA8B8ZZ34 492 aa7.04□□□□□ -1.28
CLNS1A-209ENST00000527299 THBS1P07996 1170 aa7.04□□□□□ -1.28
CLNS1A-209ENST00000527299 C1orf229Q6ZS94 237 aaPredicted RBP7.04□□□□□ -1.28
CLNS1A-209ENST00000527299 FAM117AQ9C073 453 aa7.04□□□□□ -1.28
CLNS1A-209ENST00000527299 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
CLNS1A-209ENST00000527299 PCDHB9Q9Y5E1 797 aa7.04□□□□□ -1.28
CLNS1A-209ENST00000527299 WASLO00401 505 aaPredicted RBP7.03□□□□□ -1.28
CLNS1A-209ENST00000527299 COL8A1P27658 744 aa7.03□□□□□ -1.28
CLNS1A-209ENST00000527299 TAS1R3Q7RTX0 852 aa7.03□□□□□ -1.28
CLNS1A-209ENST00000527299 Q8N3U1 123 aa7.03□□□□□ -1.28
CLNS1A-209ENST00000527299 KDM4CQ9H3R0 1056 aa7.03□□□□□ -1.28
CLNS1A-209ENST00000527299 MKL2Q9ULH7 1088 aa7.03□□□□□ -1.28
CLNS1A-209ENST00000527299 TRAK2O60296 914 aa7.02□□□□□ -1.29
CLNS1A-209ENST00000527299 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
CLNS1A-209ENST00000527299 RFC5P40937 340 aa7.02□□□□□ -1.29
CLNS1A-209ENST00000527299 RNF20Q5VTR2 975 aa7.02□□□□□ -1.29
CLNS1A-209ENST00000527299 CYP2U1Q7Z449 544 aa7.02□□□□□ -1.29
CLNS1A-209ENST00000527299 KLRG1Q96E93 195 aa7.02□□□□□ -1.29
CLNS1A-209ENST00000527299 SCTRP47872 440 aa7.01□□□□□ -1.29
CLNS1A-209ENST00000527299 FURINP09958 794 aa7□□□□□ -1.29
CLNS1A-209ENST00000527299 UBAP2LQ14157 1087 aaKnown RBP7□□□□□ -1.29
CLNS1A-209ENST00000527299 OSBPL3Q9H4L5 887 aa7□□□□□ -1.29
CLNS1A-209ENST00000527299 GPBP1L1Q9HC44 474 aaPredicted RBP7□□□□□ -1.29
CLNS1A-209ENST00000527299 ARHGEF10LQ9HCE6 1279 aa7□□□□□ -1.29
CLNS1A-209ENST00000527299 GDF2Q9UK05 429 aaPredicted RBP7□□□□□ -1.29
CLNS1A-209ENST00000527299 HOXB4P17483 251 aaPredicted RBP6.99□□□□□ -1.29
CLNS1A-209ENST00000527299 LINC00114Q6XXX2 140 aa6.99□□□□□ -1.29
CLNS1A-209ENST00000527299 EDARADDQ8WWZ3 215 aa6.99□□□□□ -1.29
CLNS1A-209ENST00000527299 PHF24Q9UPV7 400 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms