RNA–Protein interactions for RNA: ENST00000526994.6

RAB3IP-208, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-208ENST00000526994 OSBPL3Q9H4L5 887 aa9.8□□□□□ -0.84
RAB3IP-208ENST00000526994 POLMQ9NP87 494 aaPredicted RBP9.8□□□□□ -0.84
RAB3IP-208ENST00000526994 SOS2Q07890 1332 aaPredicted RBP9.8□□□□□ -0.84
RAB3IP-208ENST00000526994 TTLL8A6PVC2 850 aa9.79□□□□□ -0.84
RAB3IP-208ENST00000526994 MAN1A2O60476 641 aa9.79□□□□□ -0.84
RAB3IP-208ENST00000526994 MYCP01106 439 aaPredicted RBP9.79□□□□□ -0.84
RAB3IP-208ENST00000526994 CTSOP43234 321 aaPredicted RBP9.79□□□□□ -0.84
RAB3IP-208ENST00000526994 FIGNL2A6NMB9 653 aa9.78□□□□□ -0.84
RAB3IP-208ENST00000526994 SKIP12755 728 aa9.78□□□□□ -0.84
RAB3IP-208ENST00000526994 CYP2U1Q7Z449 544 aa9.78□□□□□ -0.84
RAB3IP-208ENST00000526994 GLMNQ92990 594 aa9.78□□□□□ -0.84
RAB3IP-208ENST00000526994 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
RAB3IP-208ENST00000526994 DNMT3LQ9UJW3 386 aa9.78□□□□□ -0.84
RAB3IP-208ENST00000526994 CHIC2Q9UKJ5 165 aa9.77□□□□□ -0.85
RAB3IP-208ENST00000526994 MEN1O00255 615 aa9.76□□□□□ -0.85
RAB3IP-208ENST00000526994 TRAK2O60296 914 aa9.76□□□□□ -0.85
RAB3IP-208ENST00000526994 UCN2Q96RP3 112 aa9.76□□□□□ -0.85
RAB3IP-208ENST00000526994 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
RAB3IP-208ENST00000526994 RAB6BQ9NRW1 208 aa9.76□□□□□ -0.85
RAB3IP-208ENST00000526994 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
RAB3IP-208ENST00000526994 MAP7D1Q3KQU3 841 aa9.75□□□□□ -0.85
RAB3IP-208ENST00000526994 FOXD4L5Q5VV16 416 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-208ENST00000526994 USP4Q13107 963 aa9.74□□□□□ -0.85
RAB3IP-208ENST00000526994 DEPDC4Q8N2C3 294 aa9.74□□□□□ -0.85
RAB3IP-208ENST00000526994 STAU1O95793 577 aaKnown RBP9.73□□□□□ -0.85
RAB3IP-208ENST00000526994 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
RAB3IP-208ENST00000526994 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
RAB3IP-208ENST00000526994 ZNF777Q9ULD5 760 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-208ENST00000526994 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
RAB3IP-208ENST00000526994 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
RAB3IP-208ENST00000526994 SIRT1Q96EB6 747 aa9.72□□□□□ -0.85
RAB3IP-208ENST00000526994 CALR3Q96L12 384 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-208ENST00000526994 VEGFBP49765 207 aa9.71□□□□□ -0.86
RAB3IP-208ENST00000526994 NCOA4Q13772 614 aa9.71□□□□□ -0.86
RAB3IP-208ENST00000526994 EML3Q32P44 896 aa9.71□□□□□ -0.86
RAB3IP-208ENST00000526994 NFATC2IPQ8NCF5 419 aa9.71□□□□□ -0.86
RAB3IP-208ENST00000526994 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
RAB3IP-208ENST00000526994 GNRH1P01148 92 aa9.7□□□□□ -0.86
RAB3IP-208ENST00000526994 CLN3Q13286 438 aa9.7□□□□□ -0.86
RAB3IP-208ENST00000526994 ZMYND15Q9H091 742 aa9.7□□□□□ -0.86
RAB3IP-208ENST00000526994 TERTO14746 1132 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-208ENST00000526994 ATP9BO43861 1147 aa9.69□□□□□ -0.86
RAB3IP-208ENST00000526994 IL2RAP01589 272 aa9.69□□□□□ -0.86
RAB3IP-208ENST00000526994 NXF1Q9UBU9 619 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-208ENST00000526994 USP17L3A6NCW0 530 aa9.68□□□□□ -0.86
RAB3IP-208ENST00000526994 USP17L4A6NCW7 530 aa9.68□□□□□ -0.86
RAB3IP-208ENST00000526994 RNF144AP50876 292 aaPredicted RBP9.68□□□□□ -0.86
RAB3IP-208ENST00000526994 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
RAB3IP-208ENST00000526994 USP17L1Q7RTZ2 530 aa9.68□□□□□ -0.86
RAB3IP-208ENST00000526994 PRICKLE2Q7Z3G6 844 aa9.68□□□□□ -0.86
RAB3IP-208ENST00000526994 ETNK1Q9HBU6 452 aa9.68□□□□□ -0.86
RAB3IP-208ENST00000526994 PTSQ03393 145 aa9.67□□□□□ -0.86
RAB3IP-208ENST00000526994 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
RAB3IP-208ENST00000526994 LYSMD3Q7Z3D4 306 aa9.67□□□□□ -0.86
RAB3IP-208ENST00000526994 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
RAB3IP-208ENST00000526994 NOD1Q9Y239 953 aa9.67□□□□□ -0.86
RAB3IP-208ENST00000526994 RHOQP17081 205 aa9.66□□□□□ -0.86
RAB3IP-208ENST00000526994 ESYT1Q9BSJ8 1104 aa9.66□□□□□ -0.86
RAB3IP-208ENST00000526994 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
RAB3IP-208ENST00000526994 GPC1P35052 558 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 SCNN1DP51172 638 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 GDF10P55107 478 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 GTF2IP78347 998 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 PSME1Q06323 249 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 NFX1Q12986 1120 aaKnown RBP9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 ESCO1Q5FWF5 840 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 C14orf37Q86TY3 774 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 PCDHGA11Q9Y5H2 935 aa9.65□□□□□ -0.86
RAB3IP-208ENST00000526994 PALM3A6NDB9 673 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 LZTS3O60299 673 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 WFS1O76024 890 aa9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 CENPCQ03188 943 aa9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 PLEKHM2Q8IWE5 1019 aa9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 PPP1R12CQ9BZL4 782 aa9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 MAFBQ9Y5Q3 323 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-208ENST00000526994 H3BM21 787 aa9.63□□□□□ -0.87
RAB3IP-208ENST00000526994 GRIP2Q9C0E4 1043 aa9.63□□□□□ -0.87
RAB3IP-208ENST00000526994 HRH3Q9Y5N1 445 aa9.63□□□□□ -0.87
RAB3IP-208ENST00000526994 PPFIA3O75145 1194 aa9.62□□□□□ -0.87
RAB3IP-208ENST00000526994 POU4F2Q12837 409 aa9.62□□□□□ -0.87
RAB3IP-208ENST00000526994 TLR1Q15399 786 aa9.62□□□□□ -0.87
RAB3IP-208ENST00000526994 LCE2CQ5TA81 110 aa9.62□□□□□ -0.87
RAB3IP-208ENST00000526994 CCDC155Q8N6L0 562 aa9.62□□□□□ -0.87
RAB3IP-208ENST00000526994 SERTAD1Q9UHV2 236 aa9.62□□□□□ -0.87
RAB3IP-208ENST00000526994 SENP3-EIF4A1A0A087X0R7 540 aa9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 TMEM229AB2RXF0 380 aa9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 INHAP05111 366 aa9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 SLC16A10Q8TF71 515 aa9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 MKRN1Q9UHC7 482 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 KIAA1024Q9UPX6 916 aa9.61□□□□□ -0.87
RAB3IP-208ENST00000526994 CLDN10P78369 228 aa9.6□□□□□ -0.87
RAB3IP-208ENST00000526994 TRIM50Q86XT4 487 aa9.6□□□□□ -0.87
RAB3IP-208ENST00000526994 ARID3CA6NKF2 412 aa9.59□□□□□ -0.87
RAB3IP-208ENST00000526994 LMOD1P29536 600 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-208ENST00000526994 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms