RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, human

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-208	ENST00000526369	TNNT2	P45379	298 aa	Predicted RBP	13.83	□□□□□ -0.2
PPFIA1-208	ENST00000526369	COG3	Q96JB2	828 aa		13.83	□□□□□ -0.2
PPFIA1-208	ENST00000526369	SYT17	Q9BSW7	474 aa		13.83	□□□□□ -0.2
PPFIA1-208	ENST00000526369	PIK3C2A	O00443	1686 aa		13.82	□□□□□ -0.2
PPFIA1-208	ENST00000526369	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.82	□□□□□ -0.2
PPFIA1-208	ENST00000526369	MTFR1L	Q9H019	292 aa		13.82	□□□□□ -0.2
PPFIA1-208	ENST00000526369	USP54	Q70EL1	1684 aa		13.82	□□□□□ -0.2
PPFIA1-208	ENST00000526369	BCL9	O00512	1426 aa		13.81	□□□□□ -0.2
PPFIA1-208	ENST00000526369	FYB1	O15117	783 aa		13.81	□□□□□ -0.2
PPFIA1-208	ENST00000526369	NME9	Q86XW9	330 aa		13.81	□□□□□ -0.2
PPFIA1-208	ENST00000526369	COL18A1	P39060	1754 aa		13.81	□□□□□ -0.2
PPFIA1-208	ENST00000526369	SMG6	Q86US8	1419 aa	Known RBP	13.81	□□□□□ -0.2
PPFIA1-208	ENST00000526369	IL2RB	P14784	551 aa		13.79	□□□□□ -0.2
PPFIA1-208	ENST00000526369	KLHL34	Q8N239	644 aa		13.79	□□□□□ -0.2
PPFIA1-208	ENST00000526369	ANKRD24	Q8TF21	1146 aa		13.79	□□□□□ -0.2
PPFIA1-208	ENST00000526369	ARX	Q96QS3	562 aa		13.79	□□□□□ -0.2
PPFIA1-208	ENST00000526369	CASZ1	Q86V15	1759 aa		13.78	□□□□□ -0.2
PPFIA1-208	ENST00000526369	LTV1	Q96GA3	475 aa	Predicted RBP	13.78	□□□□□ -0.2
PPFIA1-208	ENST00000526369	NUDC	Q9Y266	331 aa		13.78	□□□□□ -0.2
PPFIA1-208	ENST00000526369	TNS2	Q63HR2	1409 aa		13.78	□□□□□ -0.2
PPFIA1-208	ENST00000526369	COL3A1	P02461	1466 aa	Predicted RBP	13.77	□□□□□ -0.21
PPFIA1-208	ENST00000526369	MTHFS	P49914	203 aa		13.77	□□□□□ -0.21
PPFIA1-208	ENST00000526369	ZNF827	Q17R98	1081 aa		13.77	□□□□□ -0.21
PPFIA1-208	ENST00000526369	SBF2	Q86WG5	1849 aa		13.77	□□□□□ -0.21
PPFIA1-208	ENST00000526369	DDX54	Q8TDD1	881 aa	Known RBP	13.77	□□□□□ -0.21
PPFIA1-208	ENST00000526369	SGIP1	Q9BQI5	828 aa		13.77	□□□□□ -0.21
PPFIA1-208	ENST00000526369	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	RGPD4	Q7Z3J3	1758 aa		13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	UTRN	P46939	3433 aa		13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	NFAT5	O94916	1531 aa		13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	ERBB3	P21860	1342 aa		13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	GPR162	Q16538	588 aa		13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	PELP1	Q8IZL8	1130 aa	Known RBP	13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	LRRC4B	Q9NT99	713 aa		13.76	□□□□□ -0.21
PPFIA1-208	ENST00000526369	SYTL4	Q96C24	671 aa	Predicted RBP	13.75	□□□□□ -0.21
PPFIA1-208	ENST00000526369	USP31	Q70CQ4	1352 aa		13.74	□□□□□ -0.21
PPFIA1-208	ENST00000526369	MAP2	P11137	1827 aa	Known RBP	13.74	□□□□□ -0.21
PPFIA1-208	ENST00000526369	SENP3-EIF4A1	A0A087X0R7	540 aa		13.74	□□□□□ -0.21
PPFIA1-208	ENST00000526369	KCNQ4	P56696	695 aa		13.74	□□□□□ -0.21
PPFIA1-208	ENST00000526369	ADAMTS8	Q9UP79	889 aa		13.73	□□□□□ -0.21
PPFIA1-208	ENST00000526369	RGPD5	Q99666	1765 aa		13.73	□□□□□ -0.21
PPFIA1-208	ENST00000526369	WNK3	Q9BYP7	1800 aa		13.72	□□□□□ -0.21
PPFIA1-208	ENST00000526369	POLD1	P28340	1107 aa		13.72	□□□□□ -0.21
PPFIA1-208	ENST00000526369	NGEF	Q8N5V2	710 aa		13.72	□□□□□ -0.21
PPFIA1-208	ENST00000526369	TFCP2L1	Q9NZI6	479 aa		13.72	□□□□□ -0.21
PPFIA1-208	ENST00000526369	PPM1G	O15355	546 aa	Predicted RBP	13.71	□□□□□ -0.21
PPFIA1-208	ENST00000526369	DIAPH1	O60610	1272 aa	Known RBP	13.71	□□□□□ -0.21
PPFIA1-208	ENST00000526369	NEFL	P07196	543 aa		13.71	□□□□□ -0.21
PPFIA1-208	ENST00000526369	NEFM	P07197	916 aa		13.71	□□□□□ -0.21
PPFIA1-208	ENST00000526369	C1QTNF8	P60827	252 aa		13.71	□□□□□ -0.21
PPFIA1-208	ENST00000526369	AKT1S1	Q96B36	256 aa		13.71	□□□□□ -0.21
PPFIA1-208	ENST00000526369	PNN	Q9H307	717 aa	Known RBP	13.71	□□□□□ -0.21
PPFIA1-208	ENST00000526369	MSH5	O43196	834 aa		13.7	□□□□□ -0.22
PPFIA1-208	ENST00000526369	PRIM1	P49642	420 aa	Known RBP	13.7	□□□□□ -0.22
PPFIA1-208	ENST00000526369	IP6K1	Q92551	441 aa		13.7	□□□□□ -0.22
PPFIA1-208	ENST00000526369	ABCC6	O95255	1503 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	MAPK8IP3	Q9UPT6	1336 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	U2SURP	O15042	1029 aa	Known RBP	13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	FBLN1	P23142	703 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	SLC27A3	Q5K4L6	730 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	RTL1	A6NKG5	1358 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	FLT4	P35916	1363 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	KIF24	Q5T7B8	1368 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	NHS	Q6T4R5	1651 aa		13.69	□□□□□ -0.22
PPFIA1-208	ENST00000526369	PNPLA7	Q6ZV29	1317 aa		13.68	□□□□□ -0.22
PPFIA1-208	ENST00000526369	CCDC146	Q8IYE0	955 aa		13.68	□□□□□ -0.22
PPFIA1-208	ENST00000526369	RUNDC1	Q96C34	613 aa		13.68	□□□□□ -0.22
PPFIA1-208	ENST00000526369	POLK	Q9UBT6	870 aa		13.68	□□□□□ -0.22
PPFIA1-208	ENST00000526369	AMPH	P49418	695 aa		13.67	□□□□□ -0.22
PPFIA1-208	ENST00000526369	NLGN2	Q8NFZ4	835 aa		13.67	□□□□□ -0.22
PPFIA1-208	ENST00000526369	SLC16A10	Q8TF71	515 aa		13.67	□□□□□ -0.22
PPFIA1-208	ENST00000526369	EMILIN1	Q9Y6C2	1016 aa		13.67	□□□□□ -0.22
PPFIA1-208	ENST00000526369	LTN1	O94822	1766 aa		13.66	□□□□□ -0.22
PPFIA1-208	ENST00000526369	RRS1	Q15050	365 aa	Known RBP	13.66	□□□□□ -0.22
PPFIA1-208	ENST00000526369	CCNL1	Q9UK58	526 aa	Predicted RBP	13.66	□□□□□ -0.22
PPFIA1-208	ENST00000526369	MAP3K5	Q99683	1374 aa		13.66	□□□□□ -0.22
PPFIA1-208	ENST00000526369	GIGYF1	O75420	1035 aa	Predicted RBP	13.65	□□□□□ -0.22
PPFIA1-208	ENST00000526369	HOXC9	P31274	260 aa		13.65	□□□□□ -0.22
PPFIA1-208	ENST00000526369	ZCRB1	Q8TBF4	217 aa	Known RBP	13.65	□□□□□ -0.22
PPFIA1-208	ENST00000526369	SALL2	Q9Y467	1007 aa	Predicted RBP	13.65	□□□□□ -0.22
PPFIA1-208	ENST00000526369	GTF3C3	Q9Y5Q9	886 aa		13.65	□□□□□ -0.22
PPFIA1-208	ENST00000526369	MAP3K19	Q56UN5	1328 aa		13.64	□□□□□ -0.23
PPFIA1-208	ENST00000526369	PAPPA	Q13219	1627 aa		13.64	□□□□□ -0.23
PPFIA1-208	ENST00000526369	MSL1	Q68DK7	614 aa		13.64	□□□□□ -0.23
PPFIA1-208	ENST00000526369	USHBP1	Q8N6Y0	703 aa		13.64	□□□□□ -0.23
PPFIA1-208	ENST00000526369	BTAF1	O14981	1849 aa		13.64	□□□□□ -0.23
PPFIA1-208	ENST00000526369	APAF1	O14727	1248 aa		13.62	□□□□□ -0.23
PPFIA1-208	ENST00000526369	COL23A1	Q86Y22	540 aa	Predicted RBP	13.62	□□□□□ -0.23
PPFIA1-208	ENST00000526369	YBX3	P16989	372 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PPFIA1-208	ENST00000526369	NCBP3	Q53F19	620 aa	Known RBP	13.61	□□□□□ -0.23
PPFIA1-208	ENST00000526369	NBPF6	Q5VWK0	638 aa		13.61	□□□□□ -0.23
PPFIA1-208	ENST00000526369	NBPF4	Q96M43	638 aa		13.61	□□□□□ -0.23
PPFIA1-208	ENST00000526369	FCHSD2	O94868	740 aa		13.6	□□□□□ -0.23
PPFIA1-208	ENST00000526369	GOLGA2	Q08379	1002 aa		13.6	□□□□□ -0.23
PPFIA1-208	ENST00000526369	KAT6B	Q8WYB5	2073 aa		13.59	□□□□□ -0.23
PPFIA1-208	ENST00000526369	IL13	P35225	146 aa		13.59	□□□□□ -0.23
PPFIA1-208	ENST00000526369	RAPGEF4	Q8WZA2	1011 aa		13.59	□□□□□ -0.23
PPFIA1-208	ENST00000526369	MEGF6	O75095	1541 aa		13.59	□□□□□ -0.23

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