RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.17
TRIM3-203ENST00000525074 PLCB2Q00722 1185 aa16.08■□□□□ 0.16
TRIM3-203ENST00000525074 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
TRIM3-203ENST00000525074 PPLO60437 1756 aa16.07■□□□□ 0.16
TRIM3-203ENST00000525074 CCDC39Q9UFE4 941 aa16.07■□□□□ 0.16
TRIM3-203ENST00000525074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRIM3-203ENST00000525074 HS1BP3Q53T59 392 aa16.06■□□□□ 0.16
TRIM3-203ENST00000525074 SASS6Q6UVJ0 657 aa16.05■□□□□ 0.16
TRIM3-203ENST00000525074 NSD2O96028 1365 aa16.05■□□□□ 0.16
TRIM3-203ENST00000525074 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
TRIM3-203ENST00000525074 FCHSD2O94868 740 aa16.05■□□□□ 0.16
TRIM3-203ENST00000525074 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
TRIM3-203ENST00000525074 MCM10Q7L590 875 aa16.05■□□□□ 0.16
TRIM3-203ENST00000525074 DCTPP1Q9H773 170 aa16.05■□□□□ 0.16
TRIM3-203ENST00000525074 ABCC4O15439 1325 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
TRIM3-203ENST00000525074 TERF1P54274 439 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 TTC12Q9H892 705 aaPredicted RBP16.04■□□□□ 0.16
TRIM3-203ENST00000525074 MED14O60244 1454 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 DYNC1I1O14576 645 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 TMX3Q96JJ7 454 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
TRIM3-203ENST00000525074 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
TRIM3-203ENST00000525074 NEXMIFQ5QGS0 1516 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
TRIM3-203ENST00000525074 CHMP4BQ9H444 224 aaKnown RBP16.03■□□□□ 0.16
TRIM3-203ENST00000525074 USP25Q9UHP3 1055 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 SETBP1Q9Y6X0 1596 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 MYO3AQ8NEV4 1616 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 CBX1P83916 185 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 NECTIN2Q92692 538 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 SLC52A1Q9NWF4 448 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 FAM69CQ0P6D2 419 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 TSPY26PQ9H489 355 aa16.03■□□□□ 0.16
TRIM3-203ENST00000525074 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.16
TRIM3-203ENST00000525074 GNAI1P63096 354 aa16.02■□□□□ 0.16
TRIM3-203ENST00000525074 KIAA2012Q0VF49 1180 aa16.02■□□□□ 0.16
TRIM3-203ENST00000525074 MEIS3Q99687 375 aa16.02■□□□□ 0.16
TRIM3-203ENST00000525074 LARP6Q9BRS8 491 aaKnown RBP16.02■□□□□ 0.16
TRIM3-203ENST00000525074 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.15
TRIM3-203ENST00000525074 PALD1Q9ULE6 856 aa16.02■□□□□ 0.15
TRIM3-203ENST00000525074 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
TRIM3-203ENST00000525074 SLC4A10Q6U841 1118 aa16.01■□□□□ 0.15
TRIM3-203ENST00000525074 ARHGAP45Q92619 1136 aa16.01■□□□□ 0.15
TRIM3-203ENST00000525074 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
TRIM3-203ENST00000525074 MYO5BQ9ULV0 1848 aa16■□□□□ 0.15
TRIM3-203ENST00000525074 LMTK2Q8IWU2 1503 aa16■□□□□ 0.15
TRIM3-203ENST00000525074 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
TRIM3-203ENST00000525074 ZC3H13Q5T200 1668 aaKnown RBP16■□□□□ 0.15
TRIM3-203ENST00000525074 REC8O95072 547 aa16■□□□□ 0.15
TRIM3-203ENST00000525074 ERC2O15083 957 aa16■□□□□ 0.15
TRIM3-203ENST00000525074 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
TRIM3-203ENST00000525074 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
TRIM3-203ENST00000525074 PTPRMP28827 1452 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 HECW2Q9P2P5 1572 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 CEP85Q6P2H3 762 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 FOXO3O43524 673 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 RILPL2Q969X0 211 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
TRIM3-203ENST00000525074 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 EXOC6BQ9Y2D4 811 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
TRIM3-203ENST00000525074 IGSF3O75054 1194 aa15.98■□□□□ 0.15
TRIM3-203ENST00000525074 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
TRIM3-203ENST00000525074 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
TRIM3-203ENST00000525074 PIK3C2BO00750 1634 aa15.98■□□□□ 0.15
TRIM3-203ENST00000525074 SPDYE4A6NLX3 237 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 MBD3O95983 291 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 BRPF1P55201 1214 aaPredicted RBP15.97■□□□□ 0.15
TRIM3-203ENST00000525074 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 F6X3S4 739 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 HCLS1P14317 486 aaPredicted RBP15.97■□□□□ 0.15
TRIM3-203ENST00000525074 IL13P35225 146 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 NUDT16Q96DE0 195 aaKnown RBP15.97■□□□□ 0.15
TRIM3-203ENST00000525074 NUTM2GQ5VZR2 741 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 ZNF710Q8N1W2 664 aa15.97■□□□□ 0.15
TRIM3-203ENST00000525074 MCM5P33992 734 aa15.96■□□□□ 0.15
TRIM3-203ENST00000525074 USP48Q86UV5 1035 aa15.96■□□□□ 0.15
TRIM3-203ENST00000525074 PIK3R4Q99570 1358 aa15.96■□□□□ 0.15
TRIM3-203ENST00000525074 MSH6P52701 1360 aa15.96■□□□□ 0.15
TRIM3-203ENST00000525074 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.15
TRIM3-203ENST00000525074 COG3Q96JB2 828 aa15.96■□□□□ 0.15
TRIM3-203ENST00000525074 SMAP1Q8IYB5 467 aaPredicted RBP15.95■□□□□ 0.14
TRIM3-203ENST00000525074 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.95■□□□□ 0.14
TRIM3-203ENST00000525074 CFAP44Q96MT7 982 aa15.95■□□□□ 0.14
TRIM3-203ENST00000525074 CCDC94Q9BW85 323 aaPredicted RBP15.95■□□□□ 0.14
TRIM3-203ENST00000525074 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
TRIM3-203ENST00000525074 ADCY5O95622 1261 aa15.95■□□□□ 0.14
TRIM3-203ENST00000525074 BRD1O95696 1058 aa15.95■□□□□ 0.14
TRIM3-203ENST00000525074 NOLC1Q14978 699 aaKnown RBP eCLIP15.95■□□□□ 0.14
TRIM3-203ENST00000525074 FAM135BQ49AJ0 1406 aa15.94■□□□□ 0.14
TRIM3-203ENST00000525074 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
TRIM3-203ENST00000525074 MYRIPQ8NFW9 859 aa15.94■□□□□ 0.14
TRIM3-203ENST00000525074 METP08581 1390 aa15.94■□□□□ 0.14
TRIM3-203ENST00000525074 ZNF853P0CG23 659 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms