RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 PRPHP41219 470 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 USP33Q8TEY7 942 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 UBAP1Q9NZ09 502 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 SATB2Q9UPW6 733 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 FYB1O15117 783 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 TMED1Q13445 227 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 NAA16Q6N069 864 aaPredicted RBP8.16□□□□□ -1.1
LIN7C-202ENST00000524596 FAM76AQ8TAV0 307 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 RSPH9Q9H1X1 276 aaPredicted RBP8.16□□□□□ -1.1
LIN7C-202ENST00000524596 RABL2BQ9UNT1 228 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 IQSEC3Q9UPP2 1182 aaPredicted RBP8.16□□□□□ -1.1
LIN7C-202ENST00000524596 MSL3P1P0C860 447 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 SEPT7Q16181 437 aaKnown RBP8.15□□□□□ -1.1
LIN7C-202ENST00000524596 GJC2Q5T442 439 aaPredicted RBP8.15□□□□□ -1.1
LIN7C-202ENST00000524596 IWS1Q96ST2 819 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 C22orf23Q9BZE7 217 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 LRRC23Q53EV4 343 aaPredicted RBP8.15□□□□□ -1.1
LIN7C-202ENST00000524596 MCTP2Q6DN12 878 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 PPP4R4Q6NUP7 873 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 TEKT1Q969V4 418 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 UNC45AQ9H3U1 944 aa8.15□□□□□ -1.1
LIN7C-202ENST00000524596 PPFIA2O75334 1257 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 ZNF131P52739 623 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 AMOTQ4VCS5 1084 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 ARMC2Q8NEN0 867 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 CTNNBL1Q8WYA6 563 aaPredicted RBP8.15□□□□□ -1.11
LIN7C-202ENST00000524596 SPATA32Q96LK8 384 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 RABEP2Q9H5N1 569 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 C6orf203Q9P0P8 240 aaPredicted RBP8.15□□□□□ -1.11
LIN7C-202ENST00000524596 STK24Q9Y6E0 443 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 KIF3BO15066 747 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 FOSL1P15407 271 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 PSMD7P51665 324 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 MAP7D1Q3KQU3 841 aa8.15□□□□□ -1.11
LIN7C-202ENST00000524596 CDC37Q16543 378 aaPredicted RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 HS1BP3Q53T59 392 aa8.14□□□□□ -1.11
LIN7C-202ENST00000524596 SDR16C5Q8N3Y7 309 aa8.14□□□□□ -1.11
LIN7C-202ENST00000524596 BAZ1BQ9UIG0 1483 aaKnown RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 KIF2AO00139 706 aaPredicted RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 NPM3O75607 178 aaKnown RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 GBP7Q8N8V2 638 aaPredicted RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 FOXD4L1Q9NU39 408 aa8.14□□□□□ -1.11
LIN7C-202ENST00000524596 ETAA1Q9NY74 926 aa8.14□□□□□ -1.11
LIN7C-202ENST00000524596 VIMP08670 466 aaKnown RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 SDCCAG8Q86SQ7 713 aaPredicted RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
LIN7C-202ENST00000524596 C1orf115Q9H7X2 142 aa8.14□□□□□ -1.11
LIN7C-202ENST00000524596 PRPF40AO75400 957 aaKnown RBP8.13□□□□□ -1.11
LIN7C-202ENST00000524596 BRD3Q15059 726 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 CCDC70Q6NSX1 233 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 SEPT10Q9P0V9 454 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 EZRP15311 586 aaKnown RBP8.13□□□□□ -1.11
LIN7C-202ENST00000524596 MECOMQ03112 1051 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 IKQ13123 557 aaPredicted RBP8.13□□□□□ -1.11
LIN7C-202ENST00000524596 E2F5Q15329 346 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 AMOTL1Q8IY63 956 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 FBXO9Q9UK97 447 aaPredicted RBP8.13□□□□□ -1.11
LIN7C-202ENST00000524596 ANKRD18BA2A2Z9 1011 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 BLVRAP53004 296 aa8.13□□□□□ -1.11
LIN7C-202ENST00000524596 SMCR8Q8TEV9 937 aaPredicted RBP8.13□□□□□ -1.11
LIN7C-202ENST00000524596 CBFA2T2O43439 604 aa8.12□□□□□ -1.11
LIN7C-202ENST00000524596 MAP4K4O95819 1239 aaPredicted RBP8.12□□□□□ -1.11
LIN7C-202ENST00000524596 NAP1L3Q99457 506 aaPredicted RBP8.12□□□□□ -1.11
LIN7C-202ENST00000524596 SYNPO2Q9UMS6 1093 aa8.12□□□□□ -1.11
LIN7C-202ENST00000524596 TRAK2O60296 914 aa8.12□□□□□ -1.11
LIN7C-202ENST00000524596 KCNA2P16389 499 aa8.12□□□□□ -1.11
LIN7C-202ENST00000524596 DDX10Q13206 875 aaKnown RBP8.12□□□□□ -1.11
LIN7C-202ENST00000524596 FAM212AQ96EL1 285 aa8.12□□□□□ -1.11
LIN7C-202ENST00000524596 TAOK3Q9H2K8 898 aa8.12□□□□□ -1.11
LIN7C-202ENST00000524596 PABPN1LA6NDY0 278 aaKnown RBP8.12□□□□□ -1.11
LIN7C-202ENST00000524596 TRIM4Q9C037 500 aa8.12□□□□□ -1.11
LIN7C-202ENST00000524596 XRCC6P12956 609 aaKnown RBP eCLIP8.12□□□□□ -1.11
LIN7C-202ENST00000524596 MYLK4Q86YV6 388 aaPredicted RBP8.12□□□□□ -1.11
LIN7C-202ENST00000524596 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 TDRD7Q8NHU6 1098 aaKnown RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 ZNF396Q96N95 335 aaPredicted RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 ZNF777Q9ULD5 760 aaPredicted RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 LIMCH1Q9UPQ0 1083 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 RAB11FIP3O75154 756 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 DESP17661 470 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 USP5P45974 858 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 BMS1Q14692 1282 aaKnown RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 ERC1Q8IUD2 1116 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 CCDC114Q96M63 670 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 PAGR1Q9BTK6 254 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 RWDD1Q9H446 243 aaPredicted RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 IFT57Q9NWB7 429 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 POGKQ9P215 609 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 KINO60870 393 aaKnown RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 CLNS1AP54105 237 aaKnown RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 RHBDL3P58872 404 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 NEDD9Q14511 834 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 PRPF38AQ8NAV1 312 aaKnown RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 TBC1D22AQ8WUA7 517 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 EPSTI1Q96J88 318 aa8.11□□□□□ -1.11
LIN7C-202ENST00000524596 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 V9GYY5 206 aaPredicted RBP8.11□□□□□ -1.11
LIN7C-202ENST00000524596 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms