RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 BRWD3Q6RI45 1802 aa24.99■■□□□ 1.59
LMO1-203ENST00000524379 MRS2Q9HD23 443 aa24.99■■□□□ 1.59
LMO1-203ENST00000524379 IL2RBP14784 551 aa24.98■■□□□ 1.59
LMO1-203ENST00000524379 RSPH6AQ9H0K4 717 aa24.98■■□□□ 1.59
LMO1-203ENST00000524379 U2AF1L5P0DN76 240 aaPredicted RBP24.97■■□□□ 1.59
LMO1-203ENST00000524379 U2AF1Q01081 240 aaKnown RBP eCLIP24.97■■□□□ 1.59
LMO1-203ENST00000524379 NUDCQ9Y266 331 aa24.97■■□□□ 1.59
LMO1-203ENST00000524379 SHANK3Q9BYB0 1731 aa24.97■■□□□ 1.59
LMO1-203ENST00000524379 PNISRQ8TF01 805 aaKnown RBP24.96■■□□□ 1.59
LMO1-203ENST00000524379 DEFB132Q7Z7B7 95 aa24.95■■□□□ 1.58
LMO1-203ENST00000524379 PKD1L3Q7Z443 1732 aa24.95■■□□□ 1.58
LMO1-203ENST00000524379 TNS2Q63HR2 1409 aa24.94■■□□□ 1.58
LMO1-203ENST00000524379 CCER2I3L3R5 266 aa24.93■■□□□ 1.58
LMO1-203ENST00000524379 RAPGEF4Q8WZA2 1011 aa24.93■■□□□ 1.58
LMO1-203ENST00000524379 CDCA7Q9BWT1 371 aaPredicted RBP24.93■■□□□ 1.58
LMO1-203ENST00000524379 ADAMTS8Q9UP79 889 aa24.93■■□□□ 1.58
LMO1-203ENST00000524379 TATP17735 454 aaPredicted RBP24.92■■□□□ 1.58
LMO1-203ENST00000524379 PRKAR2BP31323 418 aa24.91■■□□□ 1.58
LMO1-203ENST00000524379 PHACTR3Q96KR7 559 aa24.9■■□□□ 1.58
LMO1-203ENST00000524379 PLEKHF1Q96S99 279 aa24.9■■□□□ 1.58
LMO1-203ENST00000524379 FCHSD2O94868 740 aa24.89■■□□□ 1.58
LMO1-203ENST00000524379 DDB1Q16531 1140 aa24.88■■□□□ 1.57
LMO1-203ENST00000524379 PLEKHG2Q9H7P9 1386 aa24.88■■□□□ 1.57
LMO1-203ENST00000524379 WDR43Q15061 677 aaKnown RBP eCLIP24.87■■□□□ 1.57
LMO1-203ENST00000524379 MARCH10Q8NA82 808 aaPredicted RBP24.87■■□□□ 1.57
LMO1-203ENST00000524379 ZCRB1Q8TBF4 217 aaKnown RBP24.87■■□□□ 1.57
LMO1-203ENST00000524379 CYP27B1O15528 508 aa24.86■■□□□ 1.57
LMO1-203ENST00000524379 EXOC5O00471 708 aa24.85■■□□□ 1.57
LMO1-203ENST00000524379 MTHFSDQ2M296 383 aaKnown RBP24.85■■□□□ 1.57
LMO1-203ENST00000524379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.85■■□□□ 1.57
LMO1-203ENST00000524379 BAG6P46379 1132 aa24.84■■□□□ 1.57
LMO1-203ENST00000524379 FAM182BQ5T319 152 aa24.84■■□□□ 1.57
LMO1-203ENST00000524379 CCDC146Q8IYE0 955 aa24.84■■□□□ 1.57
LMO1-203ENST00000524379 PLEKHO1Q53GL0 409 aaPredicted RBP24.82■■□□□ 1.56
LMO1-203ENST00000524379 DDX54Q8TDD1 881 aaKnown RBP24.82■■□□□ 1.56
LMO1-203ENST00000524379 SPG7Q9UQ90 795 aa24.81■■□□□ 1.56
LMO1-203ENST00000524379 AMOTQ4VCS5 1084 aa24.8■■□□□ 1.56
LMO1-203ENST00000524379 ZNF530Q6P9A1 599 aaPredicted RBP24.8■■□□□ 1.56
LMO1-203ENST00000524379 PCDH11XQ9BZA7 1347 aa24.8■■□□□ 1.56
LMO1-203ENST00000524379 PCDH11YQ9BZA8 1340 aa24.8■■□□□ 1.56
LMO1-203ENST00000524379 PHKG2P15735 406 aa24.79■■□□□ 1.56
LMO1-203ENST00000524379 PDE3BQ13370 1112 aa24.79■■□□□ 1.56
LMO1-203ENST00000524379 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
LMO1-203ENST00000524379 RUNDC1Q96C34 613 aa24.77■■□□□ 1.56
LMO1-203ENST00000524379 TOGARAM1Q9Y4F4 1720 aa24.77■■□□□ 1.56
LMO1-203ENST00000524379 KDM6AO15550 1401 aaPredicted RBP24.77■■□□□ 1.56
LMO1-203ENST00000524379 NKX1-1Q15270 411 aaPredicted RBP24.76■■□□□ 1.55
LMO1-203ENST00000524379 EN1Q05925 392 aaPredicted RBP24.75■■□□□ 1.55
LMO1-203ENST00000524379 FAM196AQ6ZSG2 479 aa24.75■■□□□ 1.55
LMO1-203ENST00000524379 IFNL2Q8IZJ0 200 aa24.75■■□□□ 1.55
LMO1-203ENST00000524379 BCL9O00512 1426 aa24.75■■□□□ 1.55
LMO1-203ENST00000524379 ADAMTS7Q9UKP4 1686 aa24.74■■□□□ 1.55
LMO1-203ENST00000524379 MAPK8IP3Q9UPT6 1336 aa24.73■■□□□ 1.55
LMO1-203ENST00000524379 NFE2L2Q16236 605 aa24.73■■□□□ 1.55
LMO1-203ENST00000524379 GAS2L2Q8NHY3 880 aa24.73■■□□□ 1.55
LMO1-203ENST00000524379 SENP3-EIF4A1A0A087X0R7 540 aa24.72■■□□□ 1.55
LMO1-203ENST00000524379 AKAP4Q5JQC9 854 aa24.72■■□□□ 1.55
LMO1-203ENST00000524379 PNNQ9H307 717 aaKnown RBP24.72■■□□□ 1.55
LMO1-203ENST00000524379 RRP7AQ9Y3A4 280 aaKnown RBP24.72■■□□□ 1.55
LMO1-203ENST00000524379 DOT1LQ8TEK3 1739 aa24.72■■□□□ 1.55
LMO1-203ENST00000524379 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
LMO1-203ENST00000524379 MAP3K5Q99683 1374 aa24.71■■□□□ 1.55
LMO1-203ENST00000524379 APAF1O14727 1248 aa24.71■■□□□ 1.55
LMO1-203ENST00000524379 TMPOP42166 694 aaKnown RBP24.71■■□□□ 1.55
LMO1-203ENST00000524379 PTF1AQ7RTS3 328 aa24.71■■□□□ 1.55
LMO1-203ENST00000524379 TRIM37O94972 964 aa24.7■■□□□ 1.54
LMO1-203ENST00000524379 MPRIPQ6WCQ1 1025 aa24.7■■□□□ 1.54
LMO1-203ENST00000524379 SBF2Q86WG5 1849 aa24.7■■□□□ 1.54
LMO1-203ENST00000524379 PSDA5PKW4 1024 aaPredicted RBP24.69■■□□□ 1.54
LMO1-203ENST00000524379 C1orf141Q5JVX7 400 aa24.69■■□□□ 1.54
LMO1-203ENST00000524379 LGR6Q9HBX8 967 aa24.69■■□□□ 1.54
LMO1-203ENST00000524379 IL17REQ8NFR9 667 aa24.68■■□□□ 1.54
LMO1-203ENST00000524379 SCN11AQ9UI33 1791 aa24.67■■□□□ 1.54
LMO1-203ENST00000524379 NHSQ6T4R5 1651 aa24.67■■□□□ 1.54
LMO1-203ENST00000524379 KCNQ2O43526 872 aa24.67■■□□□ 1.54
LMO1-203ENST00000524379 ACSBG1Q96GR2 724 aa24.67■■□□□ 1.54
LMO1-203ENST00000524379 GNAT3A8MTJ3 354 aa24.66■■□□□ 1.54
LMO1-203ENST00000524379 RNMTO43148 476 aaKnown RBP24.66■■□□□ 1.54
LMO1-203ENST00000524379 DCTN1Q14203 1278 aa24.66■■□□□ 1.54
LMO1-203ENST00000524379 EZH2Q15910 746 aaKnown RBP24.66■■□□□ 1.54
LMO1-203ENST00000524379 TRIM35Q9UPQ4 493 aa24.66■■□□□ 1.54
LMO1-203ENST00000524379 MRC1P22897 1456 aa24.65■■□□□ 1.54
LMO1-203ENST00000524379 APBA3O96018 575 aa24.65■■□□□ 1.54
LMO1-203ENST00000524379 NEFMP07197 916 aa24.65■■□□□ 1.54
LMO1-203ENST00000524379 RIPK4P57078 832 aa24.65■■□□□ 1.54
LMO1-203ENST00000524379 DCAF5Q96JK2 942 aa24.65■■□□□ 1.54
LMO1-203ENST00000524379 VIRMAQ69YN4 1812 aaKnown RBP24.65■■□□□ 1.54
LMO1-203ENST00000524379 CEMIPQ8WUJ3 1361 aa24.65■■□□□ 1.54
LMO1-203ENST00000524379 HSP90AB1P08238 724 aaKnown RBP24.64■■□□□ 1.54
LMO1-203ENST00000524379 NEUROD2Q15784 382 aa24.64■■□□□ 1.54
LMO1-203ENST00000524379 MCM10Q7L590 875 aa24.64■■□□□ 1.54
LMO1-203ENST00000524379 CAMKK2Q96RR4 588 aa24.64■■□□□ 1.54
LMO1-203ENST00000524379 PRIM1P49642 420 aaKnown RBP24.63■■□□□ 1.53
LMO1-203ENST00000524379 THUMPD2Q9BTF0 503 aaKnown RBP24.63■■□□□ 1.53
LMO1-203ENST00000524379 ITGB4P16144 1822 aa24.63■■□□□ 1.53
LMO1-203ENST00000524379 TNS1Q9HBL0 1735 aaKnown RBP24.61■■□□□ 1.53
LMO1-203ENST00000524379 R3HDM1Q15032 1099 aaKnown RBP24.61■■□□□ 1.53
LMO1-203ENST00000524379 HTATSF1O43719 755 aaKnown RBP24.6■■□□□ 1.53
LMO1-203ENST00000524379 SIPA1L3O60292 1781 aaPredicted RBP24.59■■□□□ 1.53
LMO1-203ENST00000524379 ERVV-2B6SEH9 535 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms