RNA–Protein interactions for RNA: ENST00000523853.1

MCM4-214, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 354 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-214ENST00000523853 NUDCQ9Y266 331 aa11.59□□□□□ -0.55
MCM4-214ENST00000523853 CRB1P82279 1406 aa11.59□□□□□ -0.55
MCM4-214ENST00000523853 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
MCM4-214ENST00000523853 DIAPH1O60610 1272 aaKnown RBP11.58□□□□□ -0.56
MCM4-214ENST00000523853 EIF4A2Q14240 407 aaKnown RBP11.58□□□□□ -0.56
MCM4-214ENST00000523853 QTRT2Q9H974 415 aaKnown RBP11.58□□□□□ -0.56
MCM4-214ENST00000523853 MRS2Q9HD23 443 aa11.58□□□□□ -0.56
MCM4-214ENST00000523853 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
MCM4-214ENST00000523853 NLRP2Q9NX02 1062 aa11.58□□□□□ -0.56
MCM4-214ENST00000523853 RGPD2P0DJD1 1756 aa11.58□□□□□ -0.56
MCM4-214ENST00000523853 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
MCM4-214ENST00000523853 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
MCM4-214ENST00000523853 USHBP1Q8N6Y0 703 aa11.57□□□□□ -0.56
MCM4-214ENST00000523853 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
MCM4-214ENST00000523853 THRAP3Q9Y2W1 955 aaKnown RBP11.57□□□□□ -0.56
MCM4-214ENST00000523853 ATRNO75882 1429 aa11.56□□□□□ -0.56
MCM4-214ENST00000523853 IL13P35225 146 aa11.56□□□□□ -0.56
MCM4-214ENST00000523853 GJD4Q96KN9 370 aaPredicted RBP11.56□□□□□ -0.56
MCM4-214ENST00000523853 CARD10Q9BWT7 1032 aa11.56□□□□□ -0.56
MCM4-214ENST00000523853 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
MCM4-214ENST00000523853 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
MCM4-214ENST00000523853 RXRBP28702 533 aa11.55□□□□□ -0.56
MCM4-214ENST00000523853 RBM6P78332 1123 aaKnown RBP11.55□□□□□ -0.56
MCM4-214ENST00000523853 NBPF6Q5VWK0 638 aa11.55□□□□□ -0.56
MCM4-214ENST00000523853 FAM9BQ8IZU0 186 aa11.55□□□□□ -0.56
MCM4-214ENST00000523853 TCP11L2Q8N4U5 519 aa11.55□□□□□ -0.56
MCM4-214ENST00000523853 NBPF4Q96M43 638 aa11.55□□□□□ -0.56
MCM4-214ENST00000523853 CDCA7Q9BWT1 371 aaPredicted RBP11.55□□□□□ -0.56
MCM4-214ENST00000523853 WNK3Q9BYP7 1800 aa11.55□□□□□ -0.56
MCM4-214ENST00000523853 SPATA31A1Q5TZJ5 1347 aa11.55□□□□□ -0.56
MCM4-214ENST00000523853 HMOX1P09601 288 aa11.54□□□□□ -0.56
MCM4-214ENST00000523853 EYA1Q99502 592 aa11.54□□□□□ -0.56
MCM4-214ENST00000523853 PARP4Q9UKK3 1724 aaKnown RBP11.54□□□□□ -0.56
MCM4-214ENST00000523853 COL3A1P02461 1466 aaPredicted RBP11.53□□□□□ -0.56
MCM4-214ENST00000523853 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
MCM4-214ENST00000523853 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
MCM4-214ENST00000523853 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.56
MCM4-214ENST00000523853 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
MCM4-214ENST00000523853 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
MCM4-214ENST00000523853 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
MCM4-214ENST00000523853 A0A0G2JS52 829 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 CCER2I3L3R5 266 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 NEFMP07197 916 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 MYT1Q01538 1121 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.57
MCM4-214ENST00000523853 SULT6B1Q6IMI4 303 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.57
MCM4-214ENST00000523853 RAPGEF4Q8WZA2 1011 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 GLI3P10071 1580 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 IGSF1Q8N6C5 1336 aa11.52□□□□□ -0.57
MCM4-214ENST00000523853 IL2RBP14784 551 aa11.51□□□□□ -0.57
MCM4-214ENST00000523853 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
MCM4-214ENST00000523853 RGS17Q9UGC6 210 aaPredicted RBP11.51□□□□□ -0.57
MCM4-214ENST00000523853 ADAMTS8Q9UP79 889 aa11.51□□□□□ -0.57
MCM4-214ENST00000523853 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
MCM4-214ENST00000523853 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
MCM4-214ENST00000523853 PLEKHG2Q9H7P9 1386 aa11.5□□□□□ -0.57
MCM4-214ENST00000523853 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
MCM4-214ENST00000523853 POTEAQ6S8J7 498 aa11.49□□□□□ -0.57
MCM4-214ENST00000523853 NCAPD2Q15021 1401 aa11.49□□□□□ -0.57
MCM4-214ENST00000523853 EXOC5O00471 708 aa11.48□□□□□ -0.57
MCM4-214ENST00000523853 FCHSD2O94868 740 aa11.48□□□□□ -0.57
MCM4-214ENST00000523853 DDB1Q16531 1140 aa11.48□□□□□ -0.57
MCM4-214ENST00000523853 KDRP35968 1356 aa11.48□□□□□ -0.57
MCM4-214ENST00000523853 THSD7AQ9UPZ6 1657 aa11.48□□□□□ -0.57
MCM4-214ENST00000523853 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
MCM4-214ENST00000523853 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
MCM4-214ENST00000523853 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
MCM4-214ENST00000523853 SEPT12Q8IYM1 358 aa11.47□□□□□ -0.57
MCM4-214ENST00000523853 SPG7Q9UQ90 795 aa11.47□□□□□ -0.57
MCM4-214ENST00000523853 BRWD3Q6RI45 1802 aa11.46□□□□□ -0.57
MCM4-214ENST00000523853 PKD1L3Q7Z443 1732 aa11.46□□□□□ -0.57
MCM4-214ENST00000523853 LRRC37A3O60309 1634 aa11.46□□□□□ -0.57
MCM4-214ENST00000523853 DISP2A7MBM2 1401 aa11.46□□□□□ -0.57
MCM4-214ENST00000523853 PLEKHO1Q53GL0 409 aaPredicted RBP11.46□□□□□ -0.57
MCM4-214ENST00000523853 ZCRB1Q8TBF4 217 aaKnown RBP11.46□□□□□ -0.57
MCM4-214ENST00000523853 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.57
MCM4-214ENST00000523853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.579e-7■□□□□ 10
MCM4-214ENST00000523853 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
MCM4-214ENST00000523853 OVOS2A0A0G2JMS6 1433 aa11.45□□□□□ -0.58
MCM4-214ENST00000523853 MAPK8IP3Q9UPT6 1336 aa11.45□□□□□ -0.58
MCM4-214ENST00000523853 RSPH6AQ9H0K4 717 aa11.45□□□□□ -0.58
MCM4-214ENST00000523853 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
MCM4-214ENST00000523853 MEGF6O75095 1541 aa11.45□□□□□ -0.58
MCM4-214ENST00000523853 TNS2Q63HR2 1409 aa11.44□□□□□ -0.58
MCM4-214ENST00000523853 PCDH11XQ9BZA7 1347 aa11.44□□□□□ -0.58
MCM4-214ENST00000523853 PCDH11YQ9BZA8 1340 aa11.44□□□□□ -0.58
MCM4-214ENST00000523853 NEUROD2Q15784 382 aa11.44□□□□□ -0.58
MCM4-214ENST00000523853 RGS12O14924 1447 aa11.43□□□□□ -0.58
MCM4-214ENST00000523853 C1orf141Q5JVX7 400 aa11.43□□□□□ -0.58
MCM4-214ENST00000523853 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
MCM4-214ENST00000523853 GAS2L2Q8NHY3 880 aa11.43□□□□□ -0.58
MCM4-214ENST00000523853 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
MCM4-214ENST00000523853 PLEKHF1Q96S99 279 aa11.43□□□□□ -0.58
MCM4-214ENST00000523853 SHANK3Q9BYB0 1731 aa11.43□□□□□ -0.58
MCM4-214ENST00000523853 KAT6BQ8WYB5 2073 aa11.42□□□□□ -0.58
MCM4-214ENST00000523853 APAF1O14727 1248 aa11.42□□□□□ -0.58
MCM4-214ENST00000523853 HSP90AB1P08238 724 aaKnown RBP11.42□□□□□ -0.58
MCM4-214ENST00000523853 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
MCM4-214ENST00000523853 FAM182BQ5T319 152 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms