RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
LINC00534-203ENST00000523406 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
LINC00534-203ENST00000523406 CCER1Q8TC90 406 aaPredicted RBP9.66□□□□□ -0.86
LINC00534-203ENST00000523406 CDV3Q9UKY7 258 aaKnown RBP9.66□□□□□ -0.86
LINC00534-203ENST00000523406 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
LINC00534-203ENST00000523406 USP17L5A8MUK1 530 aa9.65□□□□□ -0.86
LINC00534-203ENST00000523406 ESPNB1AK53 854 aa9.65□□□□□ -0.86
LINC00534-203ENST00000523406 GIGYF1O75420 1035 aaPredicted RBP9.65□□□□□ -0.86
LINC00534-203ENST00000523406 PLEKHM2Q8IWE5 1019 aa9.65□□□□□ -0.86
LINC00534-203ENST00000523406 MAP3K1Q13233 1512 aa9.65□□□□□ -0.86
LINC00534-203ENST00000523406 GRIN2AQ12879 1464 aa9.65□□□□□ -0.87
LINC00534-203ENST00000523406 IQGAP2Q13576 1575 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 NBPF20Q3BBV1 942 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 PLPP7Q8NBV4 271 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 EHBP1Q8NDI1 1231 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 KIAA0586Q9BVV6 1533 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 SYNJ2O15056 1496 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 FYCO1Q9BQS8 1478 aa9.64□□□□□ -0.87
LINC00534-203ENST00000523406 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 MAP7D1Q3KQU3 841 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 TSGA10IPQ3SY00 556 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 TRAF7Q6Q0C0 670 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
LINC00534-203ENST00000523406 CCDC85AQ96PX6 553 aaPredicted RBP9.63□□□□□ -0.87
LINC00534-203ENST00000523406 SIAH2O43255 324 aa9.62□□□□□ -0.87
LINC00534-203ENST00000523406 LZTS3O60299 673 aaPredicted RBP9.62□□□□□ -0.87
LINC00534-203ENST00000523406 RNF20Q5VTR2 975 aa9.62□□□□□ -0.87
LINC00534-203ENST00000523406 MPNDQ8N594 471 aa9.62□□□□□ -0.87
LINC00534-203ENST00000523406 CDK15Q96Q40 435 aa9.62□□□□□ -0.87
LINC00534-203ENST00000523406 PCF11O94913 1555 aaKnown RBP9.62□□□□□ -0.87
LINC00534-203ENST00000523406 TIAM1Q13009 1591 aa9.62□□□□□ -0.87
LINC00534-203ENST00000523406 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
LINC00534-203ENST00000523406 WNT7AO00755 349 aa9.61□□□□□ -0.87
LINC00534-203ENST00000523406 SEPT12Q8IYM1 358 aa9.61□□□□□ -0.87
LINC00534-203ENST00000523406 DEPDC4Q8N2C3 294 aa9.61□□□□□ -0.87
LINC00534-203ENST00000523406 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
LINC00534-203ENST00000523406 LRRC9Q6ZRR7 1453 aa9.6□□□□□ -0.87
LINC00534-203ENST00000523406 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
LINC00534-203ENST00000523406 NCOA4Q13772 614 aa9.6□□□□□ -0.87
LINC00534-203ENST00000523406 VASH1Q7L8A9 365 aaPredicted RBP9.6□□□□□ -0.87
LINC00534-203ENST00000523406 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
LINC00534-203ENST00000523406 VRTNQ9H8Y1 702 aa9.6□□□□□ -0.87
LINC00534-203ENST00000523406 ZNF598Q86UK7 904 aaKnown RBP9.59□□□□□ -0.87
LINC00534-203ENST00000523406 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
LINC00534-203ENST00000523406 DOLKQ9UPQ8 538 aa9.59□□□□□ -0.87
LINC00534-203ENST00000523406 UGGT2Q9NYU1 1516 aa9.59□□□□□ -0.87
LINC00534-203ENST00000523406 MTUS2Q5JR59 1369 aa9.59□□□□□ -0.87
LINC00534-203ENST00000523406 CCNB3Q8WWL7 1395 aa9.59□□□□□ -0.87
LINC00534-203ENST00000523406 ATG7O95352 703 aa9.58□□□□□ -0.88
LINC00534-203ENST00000523406 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
LINC00534-203ENST00000523406 INTS6LQ5JSJ4 861 aaKnown RBP9.58□□□□□ -0.88
LINC00534-203ENST00000523406 MRGPRX2Q96LB1 330 aa9.58□□□□□ -0.88
LINC00534-203ENST00000523406 TLL2Q9Y6L7 1015 aa9.58□□□□□ -0.88
LINC00534-203ENST00000523406 V9GY48 417 aaPredicted RBP9.58□□□□□ -0.88
LINC00534-203ENST00000523406 RRBP1Q9P2E9 1410 aaKnown RBP9.57□□□□□ -0.88
LINC00534-203ENST00000523406 GRM5P41594 1212 aa9.57□□□□□ -0.88
LINC00534-203ENST00000523406 EML3Q32P44 896 aa9.57□□□□□ -0.88
LINC00534-203ENST00000523406 ZNF697Q5TEC3 545 aa9.57□□□□□ -0.88
LINC00534-203ENST00000523406 CDCA7Q9BWT1 371 aaPredicted RBP9.57□□□□□ -0.88
LINC00534-203ENST00000523406 PRKD2Q9BZL6 878 aa9.57□□□□□ -0.88
LINC00534-203ENST00000523406 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
LINC00534-203ENST00000523406 CARMIL2Q6F5E8 1435 aa9.56□□□□□ -0.88
LINC00534-203ENST00000523406 ITGAEP38570 1179 aa9.56□□□□□ -0.88
LINC00534-203ENST00000523406 FAM50AQ14320 339 aaKnown RBP9.56□□□□□ -0.88
LINC00534-203ENST00000523406 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
LINC00534-203ENST00000523406 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
LINC00534-203ENST00000523406 NUP160Q12769 1436 aa9.56□□□□□ -0.88
LINC00534-203ENST00000523406 CFAP43Q8NDM7 1665 aa9.55□□□□□ -0.88
LINC00534-203ENST00000523406 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
LINC00534-203ENST00000523406 PCDHB11Q9Y5F2 797 aa9.55□□□□□ -0.88
LINC00534-203ENST00000523406 CCDC18Q5T9S5 1454 aa9.54□□□□□ -0.88
LINC00534-203ENST00000523406 FAM196BA6NMK8 535 aa9.54□□□□□ -0.88
LINC00534-203ENST00000523406 ERVH48-1M5A8F1 160 aa9.54□□□□□ -0.88
LINC00534-203ENST00000523406 ADH1CP00326 375 aa9.54□□□□□ -0.88
LINC00534-203ENST00000523406 FSHRP23945 695 aa9.54□□□□□ -0.88
LINC00534-203ENST00000523406 ELOAQ14241 798 aaKnown RBP9.54□□□□□ -0.88
LINC00534-203ENST00000523406 OXLD1Q5BKU9 147 aa9.54□□□□□ -0.88
LINC00534-203ENST00000523406 CEP170Q5SW79 1584 aa9.54□□□□□ -0.88
LINC00534-203ENST00000523406 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
LINC00534-203ENST00000523406 DISP1Q96F81 1524 aa9.53□□□□□ -0.88
LINC00534-203ENST00000523406 RAB15P59190 212 aa9.53□□□□□ -0.88
LINC00534-203ENST00000523406 NR5A1Q13285 461 aa9.53□□□□□ -0.88
LINC00534-203ENST00000523406 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
LINC00534-203ENST00000523406 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
LINC00534-203ENST00000523406 NOD1Q9Y239 953 aa9.53□□□□□ -0.88
LINC00534-203ENST00000523406 KIAA0556O60303 1618 aa9.53□□□□□ -0.88
LINC00534-203ENST00000523406 GDF9O60383 454 aa9.52□□□□□ -0.89
LINC00534-203ENST00000523406 PDIA4P13667 645 aaKnown RBP9.52□□□□□ -0.89
LINC00534-203ENST00000523406 PTK7Q13308 1070 aa9.52□□□□□ -0.89
LINC00534-203ENST00000523406 CRTC2Q53ET0 693 aaPredicted RBP9.52□□□□□ -0.89
LINC00534-203ENST00000523406 HECW1Q76N89 1606 aa9.52□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L15C9J2P7 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L13C9JLJ4 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L11C9JVI0 530 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms