RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 BEND7Q8N7W2 519 aaPredicted RBP7.67□□□□□ -1.18
PCM1-217ENST00000522998 IGF1RP08069 1367 aa7.67□□□□□ -1.18
PCM1-217ENST00000522998 GPR25O00155 361 aa7.66□□□□□ -1.18
PCM1-217ENST00000522998 ADAM23O75077 832 aa7.66□□□□□ -1.18
PCM1-217ENST00000522998 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
PCM1-217ENST00000522998 NEDD1Q8NHV4 660 aa7.66□□□□□ -1.18
PCM1-217ENST00000522998 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
PCM1-217ENST00000522998 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
PCM1-217ENST00000522998 BCRP11274 1271 aa7.65□□□□□ -1.18
PCM1-217ENST00000522998 XP32Q5T750 250 aa7.65□□□□□ -1.18
PCM1-217ENST00000522998 RIPOR1Q6ZS17 1223 aa7.65□□□□□ -1.18
PCM1-217ENST00000522998 TRIM52Q96A61 297 aa7.65□□□□□ -1.18
PCM1-217ENST00000522998 CYLDQ9NQC7 956 aa7.65□□□□□ -1.18
PCM1-217ENST00000522998 ESPNB1AK53 854 aa7.64□□□□□ -1.19
PCM1-217ENST00000522998 AP1G2O75843 785 aa7.64□□□□□ -1.19
PCM1-217ENST00000522998 SKIV2LQ15477 1246 aaKnown RBP7.64□□□□□ -1.19
PCM1-217ENST00000522998 FBXO31Q5XUX0 539 aaPredicted RBP7.64□□□□□ -1.19
PCM1-217ENST00000522998 PPP2R2DQ66LE6 453 aa7.64□□□□□ -1.19
PCM1-217ENST00000522998 ATP1B4Q9UN42 357 aaPredicted RBP7.64□□□□□ -1.19
PCM1-217ENST00000522998 DBN1Q16643 649 aa7.63□□□□□ -1.19
PCM1-217ENST00000522998 GALNT6Q8NCL4 622 aa7.63□□□□□ -1.19
PCM1-217ENST00000522998 EPS8L1Q8TE68 723 aa7.63□□□□□ -1.19
PCM1-217ENST00000522998 H7C1W4 665 aa7.62□□□□□ -1.19
PCM1-217ENST00000522998 MEN1O00255 615 aa7.62□□□□□ -1.19
PCM1-217ENST00000522998 ITGB2P05107 769 aa7.62□□□□□ -1.19
PCM1-217ENST00000522998 SEPT12Q8IYM1 358 aa7.62□□□□□ -1.19
PCM1-217ENST00000522998 PROCA1Q8NCQ7 364 aaPredicted RBP7.62□□□□□ -1.19
PCM1-217ENST00000522998 GTPBP3Q969Y2 492 aaKnown RBP7.62□□□□□ -1.19
PCM1-217ENST00000522998 ACDQ96AP0 544 aa7.62□□□□□ -1.19
PCM1-217ENST00000522998 TRERF1Q96PN7 1200 aa7.62□□□□□ -1.19
PCM1-217ENST00000522998 ATP5J2-PTCD1G3V325 749 aa7.61□□□□□ -1.19
PCM1-217ENST00000522998 PROCP04070 461 aa7.61□□□□□ -1.19
PCM1-217ENST00000522998 GPC1P35052 558 aa7.61□□□□□ -1.19
PCM1-217ENST00000522998 SH3D19Q5HYK7 790 aa7.61□□□□□ -1.19
PCM1-217ENST00000522998 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.61□□□□□ -1.19
PCM1-217ENST00000522998 DYRK1BQ9Y463 629 aa7.61□□□□□ -1.19
PCM1-217ENST00000522998 GAS2L1Q99501 681 aaPredicted RBP7.6□□□□□ -1.19
PCM1-217ENST00000522998 HMX1Q9NP08 348 aaPredicted RBP7.6□□□□□ -1.19
PCM1-217ENST00000522998 NSFL1CQ9UNZ2 370 aaKnown RBP7.6□□□□□ -1.19
PCM1-217ENST00000522998 MX2P20592 715 aa7.59□□□□□ -1.19
PCM1-217ENST00000522998 LRRC4BQ9NT99 713 aa7.59□□□□□ -1.19
PCM1-217ENST00000522998 USP17L8P0C7I0 530 aa7.58□□□□□ -1.2
PCM1-217ENST00000522998 POU4F2Q12837 409 aa7.58□□□□□ -1.2
PCM1-217ENST00000522998 SLC27A3Q5K4L6 730 aa7.58□□□□□ -1.2
PCM1-217ENST00000522998 A0A1W2PRU2 124 aa7.57□□□□□ -1.2
PCM1-217ENST00000522998 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
PCM1-217ENST00000522998 K7ELQ4 463 aaPredicted RBP7.56□□□□□ -1.2
PCM1-217ENST00000522998 OIP5O43482 229 aa7.56□□□□□ -1.2
PCM1-217ENST00000522998 GIGYF1O75420 1035 aaPredicted RBP7.55□□□□□ -1.2
PCM1-217ENST00000522998 NBPF10Q6P3W6 841 aaKnown RBP7.55□□□□□ -1.2
PCM1-217ENST00000522998 NBPF15Q8N660 670 aa7.55□□□□□ -1.2
PCM1-217ENST00000522998 NUCKS1Q9H1E3 243 aaKnown RBP7.55□□□□□ -1.2
PCM1-217ENST00000522998 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
PCM1-217ENST00000522998 CC2D2BQ6DHV5 1058 aa7.54□□□□□ -1.2
PCM1-217ENST00000522998 CCDC125Q86Z20 511 aa7.54□□□□□ -1.2
PCM1-217ENST00000522998 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
PCM1-217ENST00000522998 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
PCM1-217ENST00000522998 TIMMDC1Q9NPL8 285 aa7.54□□□□□ -1.2
PCM1-217ENST00000522998 MAP2K3P46734 347 aa7.53□□□□□ -1.2
PCM1-217ENST00000522998 ERVK-9P63128 1117 aa7.53□□□□□ -1.2
PCM1-217ENST00000522998 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
PCM1-217ENST00000522998 WDR44Q5JSH3 913 aa7.53□□□□□ -1.2
PCM1-217ENST00000522998 CYP2U1Q7Z449 544 aa7.53□□□□□ -1.2
PCM1-217ENST00000522998 GRIP2Q9C0E4 1043 aa7.53□□□□□ -1.2
PCM1-217ENST00000522998 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 SPATA31C2B4DYI2 1134 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 F11P03951 625 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 BAG6P46379 1132 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 CLN3Q13286 438 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 TAS1R3Q7RTX0 852 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 FAM117AQ9C073 453 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 MKL2Q9ULH7 1088 aa7.52□□□□□ -1.21
PCM1-217ENST00000522998 KRBA1A5PL33 1030 aa7.51□□□□□ -1.21
PCM1-217ENST00000522998 WASLO00401 505 aaPredicted RBP7.51□□□□□ -1.21
PCM1-217ENST00000522998 RNF20Q5VTR2 975 aa7.51□□□□□ -1.21
PCM1-217ENST00000522998 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
PCM1-217ENST00000522998 KDM4CQ9H3R0 1056 aa7.51□□□□□ -1.21
PCM1-217ENST00000522998 SHISA8B8ZZ34 492 aa7.5□□□□□ -1.21
PCM1-217ENST00000522998 RFC5P40937 340 aa7.5□□□□□ -1.21
PCM1-217ENST00000522998 ALYREFQ86V81 257 aaKnown RBP7.5□□□□□ -1.21
PCM1-217ENST00000522998 CFHR5Q9BXR6 569 aa7.5□□□□□ -1.21
PCM1-217ENST00000522998 RRAGCQ9HB90 399 aa7.5□□□□□ -1.21
PCM1-217ENST00000522998 GPBP1L1Q9HC44 474 aaPredicted RBP7.5□□□□□ -1.21
PCM1-217ENST00000522998 FBXO45P0C2W1 286 aa7.49□□□□□ -1.21
PCM1-217ENST00000522998 ESF1Q9H501 851 aaKnown RBP7.49□□□□□ -1.21
PCM1-217ENST00000522998 ARHGEF10LQ9HCE6 1279 aa7.49□□□□□ -1.21
PCM1-217ENST00000522998 PHF24Q9UPV7 400 aa7.49□□□□□ -1.21
PCM1-217ENST00000522998 FURINP09958 794 aa7.48□□□□□ -1.21
PCM1-217ENST00000522998 SCTRP47872 440 aa7.48□□□□□ -1.21
PCM1-217ENST00000522998 KLRG1Q96E93 195 aa7.48□□□□□ -1.21
PCM1-217ENST00000522998 GPAMQ9HCL2 828 aa7.48□□□□□ -1.21
PCM1-217ENST00000522998 GDF2Q9UK05 429 aaPredicted RBP7.48□□□□□ -1.21
PCM1-217ENST00000522998 COL8A1P27658 744 aa7.47□□□□□ -1.21
PCM1-217ENST00000522998 Q8N3U1 123 aa7.47□□□□□ -1.21
PCM1-217ENST00000522998 PCDHB11Q9Y5F2 797 aa7.47□□□□□ -1.21
PCM1-217ENST00000522998 THBS1P07996 1170 aa7.46□□□□□ -1.22
PCM1-217ENST00000522998 C1orf229Q6ZS94 237 aaPredicted RBP7.46□□□□□ -1.22
PCM1-217ENST00000522998 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
PCM1-217ENST00000522998 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
PCM1-217ENST00000522998 TRAK2O60296 914 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms