RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
EXTL3-211ENST00000522698 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
EXTL3-211ENST00000522698 KDRP35968 1356 aa18.75■□□□□ 0.59
EXTL3-211ENST00000522698 EYA1Q99502 592 aa18.74■□□□□ 0.59
EXTL3-211ENST00000522698 NBPF6Q5VWK0 638 aa18.73■□□□□ 0.59
EXTL3-211ENST00000522698 NBPF4Q96M43 638 aa18.73■□□□□ 0.59
EXTL3-211ENST00000522698 CRB1P82279 1406 aa18.73■□□□□ 0.59
EXTL3-211ENST00000522698 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
EXTL3-211ENST00000522698 WDR43Q15061 677 aaKnown RBP eCLIP18.72■□□□□ 0.59
EXTL3-211ENST00000522698 U2AF1L5P0DN76 240 aaPredicted RBP18.71■□□□□ 0.59
EXTL3-211ENST00000522698 U2AF1Q01081 240 aaKnown RBP eCLIP18.71■□□□□ 0.59
EXTL3-211ENST00000522698 NBPF14Q5TI25 921 aa18.71■□□□□ 0.59
EXTL3-211ENST00000522698 ADAMTS8Q9UP79 889 aa18.71■□□□□ 0.59
EXTL3-211ENST00000522698 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
EXTL3-211ENST00000522698 PARP4Q9UKK3 1724 aaKnown RBP18.7■□□□□ 0.58
EXTL3-211ENST00000522698 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
EXTL3-211ENST00000522698 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
EXTL3-211ENST00000522698 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
EXTL3-211ENST00000522698 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
EXTL3-211ENST00000522698 SULT6B1Q6IMI4 303 aa18.68■□□□□ 0.58
EXTL3-211ENST00000522698 TOM1L2Q6ZVM7 507 aa18.68■□□□□ 0.58
EXTL3-211ENST00000522698 FAM9BQ8IZU0 186 aa18.68■□□□□ 0.58
EXTL3-211ENST00000522698 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
EXTL3-211ENST00000522698 NLRP2Q9NX02 1062 aa18.68■□□□□ 0.58
EXTL3-211ENST00000522698 PKD1L3Q7Z443 1732 aa18.68■□□□□ 0.58
EXTL3-211ENST00000522698 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
EXTL3-211ENST00000522698 FCHSD2O94868 740 aa18.67■□□□□ 0.58
EXTL3-211ENST00000522698 HMOX1P09601 288 aa18.67■□□□□ 0.58
EXTL3-211ENST00000522698 RGPD3A6NKT7 1758 aaPredicted RBP18.66■□□□□ 0.58
EXTL3-211ENST00000522698 RGPD4Q7Z3J3 1758 aa18.66■□□□□ 0.58
EXTL3-211ENST00000522698 YY1P25490 414 aa18.66■□□□□ 0.58
EXTL3-211ENST00000522698 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
EXTL3-211ENST00000522698 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
EXTL3-211ENST00000522698 SHANK3Q9BYB0 1731 aa18.66■□□□□ 0.58
EXTL3-211ENST00000522698 OVOS2A0A0G2JMS6 1433 aa18.66■□□□□ 0.58
EXTL3-211ENST00000522698 MEGF6O75095 1541 aa18.65■□□□□ 0.58
EXTL3-211ENST00000522698 PLEKHF1Q96S99 279 aa18.65■□□□□ 0.58
EXTL3-211ENST00000522698 PRKAR2BP31323 418 aa18.63■□□□□ 0.57
EXTL3-211ENST00000522698 SPON1Q9HCB6 807 aa18.63■□□□□ 0.57
EXTL3-211ENST00000522698 PPP1R1BQ9UD71 204 aaPredicted RBP18.63■□□□□ 0.57
EXTL3-211ENST00000522698 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
EXTL3-211ENST00000522698 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
EXTL3-211ENST00000522698 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
EXTL3-211ENST00000522698 SBF2Q86WG5 1849 aa18.62■□□□□ 0.57
EXTL3-211ENST00000522698 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
EXTL3-211ENST00000522698 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
EXTL3-211ENST00000522698 KCNQ2O43526 872 aa18.6■□□□□ 0.57
EXTL3-211ENST00000522698 DDB1Q16531 1140 aa18.6■□□□□ 0.57
EXTL3-211ENST00000522698 PTF1AQ7RTS3 328 aa18.6■□□□□ 0.57
EXTL3-211ENST00000522698 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
EXTL3-211ENST00000522698 IL2RBP14784 551 aa18.58■□□□□ 0.56
EXTL3-211ENST00000522698 RAPGEF4Q8WZA2 1011 aa18.58■□□□□ 0.56
EXTL3-211ENST00000522698 TATP17735 454 aaPredicted RBP18.57■□□□□ 0.56
EXTL3-211ENST00000522698 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
EXTL3-211ENST00000522698 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
EXTL3-211ENST00000522698 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
EXTL3-211ENST00000522698 PLSCR1O15162 318 aa18.56■□□□□ 0.56
EXTL3-211ENST00000522698 MARCH10Q8NA82 808 aaPredicted RBP18.56■□□□□ 0.56
EXTL3-211ENST00000522698 CDCA7Q9BWT1 371 aaPredicted RBP18.56■□□□□ 0.56
EXTL3-211ENST00000522698 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.56
EXTL3-211ENST00000522698 ADAMTS7Q9UKP4 1686 aa18.55■□□□□ 0.56
EXTL3-211ENST00000522698 TNS2Q63HR2 1409 aa18.55■□□□□ 0.56
EXTL3-211ENST00000522698 APAF1O14727 1248 aa18.54■□□□□ 0.56
EXTL3-211ENST00000522698 NEFMP07197 916 aa18.54■□□□□ 0.56
EXTL3-211ENST00000522698 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
EXTL3-211ENST00000522698 AMOTQ4VCS5 1084 aa18.54■□□□□ 0.56
EXTL3-211ENST00000522698 BCL11BQ9C0K0 894 aaPredicted RBP18.54■□□□□ 0.56
EXTL3-211ENST00000522698 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
EXTL3-211ENST00000522698 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
EXTL3-211ENST00000522698 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
EXTL3-211ENST00000522698 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
EXTL3-211ENST00000522698 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
EXTL3-211ENST00000522698 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
EXTL3-211ENST00000522698 PDGFDQ9GZP0 370 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-211ENST00000522698 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
EXTL3-211ENST00000522698 BCL9O00512 1426 aa18.5■□□□□ 0.55
EXTL3-211ENST00000522698 PROM2Q8N271 834 aa18.5■□□□□ 0.55
EXTL3-211ENST00000522698 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
EXTL3-211ENST00000522698 ZNF530Q6P9A1 599 aaPredicted RBP18.49■□□□□ 0.55
EXTL3-211ENST00000522698 NGEFQ8N5V2 710 aa18.49■□□□□ 0.55
EXTL3-211ENST00000522698 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
EXTL3-211ENST00000522698 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
EXTL3-211ENST00000522698 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
EXTL3-211ENST00000522698 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
EXTL3-211ENST00000522698 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
EXTL3-211ENST00000522698 SIPA1L3O60292 1781 aaPredicted RBP18.48■□□□□ 0.55
EXTL3-211ENST00000522698 CYP27B1O15528 508 aa18.48■□□□□ 0.55
EXTL3-211ENST00000522698 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
EXTL3-211ENST00000522698 SENP3-EIF4A1A0A087X0R7 540 aa18.47■□□□□ 0.55
EXTL3-211ENST00000522698 ZBTB7AO95365 584 aa18.47■□□□□ 0.55
EXTL3-211ENST00000522698 RIPK4P57078 832 aa18.47■□□□□ 0.55
EXTL3-211ENST00000522698 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
EXTL3-211ENST00000522698 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
EXTL3-211ENST00000522698 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
EXTL3-211ENST00000522698 EXOC5O00471 708 aa18.46■□□□□ 0.55
EXTL3-211ENST00000522698 PHKG2P15735 406 aa18.46■□□□□ 0.55
EXTL3-211ENST00000522698 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
EXTL3-211ENST00000522698 ITGB4P16144 1822 aa18.45■□□□□ 0.54
EXTL3-211ENST00000522698 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
EXTL3-211ENST00000522698 HTATSF1O43719 755 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms