RNA–Protein interactions for RNA: ENST00000520851.1

PDGFRB-208, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 406 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-208ENST00000520851 ATRNO75882 1429 aa11.23□□□□□ -0.61
PDGFRB-208ENST00000520851 GLI3P10071 1580 aa11.22□□□□□ -0.61
PDGFRB-208ENST00000520851 IL13P35225 146 aa11.22□□□□□ -0.61
PDGFRB-208ENST00000520851 NCAPD2Q15021 1401 aa11.22□□□□□ -0.61
PDGFRB-208ENST00000520851 LTV1Q96GA3 475 aaPredicted RBP11.22□□□□□ -0.61
PDGFRB-208ENST00000520851 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
PDGFRB-208ENST00000520851 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
PDGFRB-208ENST00000520851 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 SPATA31A5Q5VU36 1347 aa11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 SPATA31A7Q8IWB4 1347 aa11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 NEFMP07197 916 aa11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 LARP1Q6PKG0 1096 aaKnown RBP11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 QTRT2Q9H974 415 aaKnown RBP11.21□□□□□ -0.61
PDGFRB-208ENST00000520851 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.62
PDGFRB-208ENST00000520851 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
PDGFRB-208ENST00000520851 GJD4Q96KN9 370 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-208ENST00000520851 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
PDGFRB-208ENST00000520851 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
PDGFRB-208ENST00000520851 KDRP35968 1356 aa11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 FCHSD2O94868 740 aa11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 VASPP50552 380 aaPredicted RBP11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 RBM6P78332 1123 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 NBPF6Q5VWK0 638 aa11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 NBPF4Q96M43 638 aa11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 EYA1Q99502 592 aa11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
PDGFRB-208ENST00000520851 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
PDGFRB-208ENST00000520851 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-208ENST00000520851 IL2RBP14784 551 aa11.18□□□□□ -0.62
PDGFRB-208ENST00000520851 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDGFRB-208ENST00000520851 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
PDGFRB-208ENST00000520851 RXRBP28702 533 aa11.17□□□□□ -0.62
PDGFRB-208ENST00000520851 SULT6B1Q6IMI4 303 aa11.17□□□□□ -0.62
PDGFRB-208ENST00000520851 MIER1Q8N108 512 aa11.17□□□□□ -0.62
PDGFRB-208ENST00000520851 USP35Q9P2H5 1018 aa11.17□□□□□ -0.62
PDGFRB-208ENST00000520851 ITGB4P16144 1822 aa11.16□□□□□ -0.62
PDGFRB-208ENST00000520851 ONECUT3O60422 494 aaPredicted RBP11.16□□□□□ -0.62
PDGFRB-208ENST00000520851 AMOTQ4VCS5 1084 aa11.16□□□□□ -0.62
PDGFRB-208ENST00000520851 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDGFRB-208ENST00000520851 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
PDGFRB-208ENST00000520851 SPG7Q9UQ90 795 aa11.15□□□□□ -0.62
PDGFRB-208ENST00000520851 OVOS2A0A0G2JMS6 1433 aa11.15□□□□□ -0.62
PDGFRB-208ENST00000520851 DISP2A7MBM2 1401 aa11.15□□□□□ -0.62
PDGFRB-208ENST00000520851 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
PDGFRB-208ENST00000520851 EXOC5O00471 708 aa11.14□□□□□ -0.63
PDGFRB-208ENST00000520851 PLEKHO1Q53GL0 409 aaPredicted RBP11.14□□□□□ -0.63
PDGFRB-208ENST00000520851 PNISRQ8TF01 805 aaKnown RBP11.14□□□□□ -0.63
PDGFRB-208ENST00000520851 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
PDGFRB-208ENST00000520851 TNS2Q63HR2 1409 aa11.14□□□□□ -0.63
PDGFRB-208ENST00000520851 MEGF6O75095 1541 aa11.14□□□□□ -0.63
PDGFRB-208ENST00000520851 DOT1LQ8TEK3 1739 aa11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 A0A0G2JS52 829 aa11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 HMOX1P09601 288 aa11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 MYT1Q01538 1121 aa11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 DDB1Q16531 1140 aa11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 USHBP1Q8N6Y0 703 aa11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
PDGFRB-208ENST00000520851 PCDH11XQ9BZA7 1347 aa11.12□□□□□ -0.63
PDGFRB-208ENST00000520851 PCDH11YQ9BZA8 1340 aa11.12□□□□□ -0.63
PDGFRB-208ENST00000520851 PRKAR2BP31323 418 aa11.12□□□□□ -0.63
PDGFRB-208ENST00000520851 GAS2L2Q8NHY3 880 aa11.12□□□□□ -0.63
PDGFRB-208ENST00000520851 ZCRB1Q8TBF4 217 aaKnown RBP11.12□□□□□ -0.63
PDGFRB-208ENST00000520851 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
PDGFRB-208ENST00000520851 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
PDGFRB-208ENST00000520851 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 HSP90AB1P08238 724 aaKnown RBP11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 CCDC184Q52MB2 194 aa11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
PDGFRB-208ENST00000520851 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
PDGFRB-208ENST00000520851 SEPT12Q8IYM1 358 aa11.1□□□□□ -0.63
PDGFRB-208ENST00000520851 IFNL2Q8IZJ0 200 aa11.1□□□□□ -0.63
PDGFRB-208ENST00000520851 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
PDGFRB-208ENST00000520851 NHSQ6T4R5 1651 aa11.1□□□□□ -0.63
PDGFRB-208ENST00000520851 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
PDGFRB-208ENST00000520851 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
PDGFRB-208ENST00000520851 RGS12O14924 1447 aa11.09□□□□□ -0.63
PDGFRB-208ENST00000520851 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
PDGFRB-208ENST00000520851 AKAP4Q5JQC9 854 aa11.08□□□□□ -0.64
PDGFRB-208ENST00000520851 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
PDGFRB-208ENST00000520851 TOGARAM1Q9Y4F4 1720 aa11.08□□□□□ -0.64
PDGFRB-208ENST00000520851 BCL9O00512 1426 aa11.08□□□□□ -0.64
PDGFRB-208ENST00000520851 BTAF1O14981 1849 aa11.07□□□□□ -0.64
PDGFRB-208ENST00000520851 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-208ENST00000520851 RGPD3A6NKT7 1758 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-208ENST00000520851 RGPD4Q7Z3J3 1758 aa11.07□□□□□ -0.64
PDGFRB-208ENST00000520851 MAP3K5Q99683 1374 aa11.06□□□□□ -0.64
PDGFRB-208ENST00000520851 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
PDGFRB-208ENST00000520851 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms