RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
PABPC1-213ENST00000519848 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
PABPC1-213ENST00000519848 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
PABPC1-213ENST00000519848 ZBTB7CA1YPR0 619 aa12.42□□□□□ -0.42
PABPC1-213ENST00000519848 SOX12O15370 315 aa12.42□□□□□ -0.42
PABPC1-213ENST00000519848 NLRP13Q86W25 1043 aa12.42□□□□□ -0.42
PABPC1-213ENST00000519848 NME9Q86XW9 330 aa12.42□□□□□ -0.42
PABPC1-213ENST00000519848 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
PABPC1-213ENST00000519848 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-213ENST00000519848 RGPD4Q7Z3J3 1758 aa12.42□□□□□ -0.42
PABPC1-213ENST00000519848 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
PABPC1-213ENST00000519848 ARHGEF25Q86VW2 580 aa12.41□□□□□ -0.42
PABPC1-213ENST00000519848 TCP11L2Q8N4U5 519 aa12.41□□□□□ -0.42
PABPC1-213ENST00000519848 KTN1Q86UP2 1357 aaKnown RBP12.41□□□□□ -0.42
PABPC1-213ENST00000519848 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
PABPC1-213ENST00000519848 ABCC6O95255 1503 aa12.4□□□□□ -0.42
PABPC1-213ENST00000519848 USP31Q70CQ4 1352 aa12.4□□□□□ -0.42
PABPC1-213ENST00000519848 R3HDM1Q15032 1099 aaKnown RBP12.39□□□□□ -0.43
PABPC1-213ENST00000519848 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
PABPC1-213ENST00000519848 WDR17Q8IZU2 1322 aa12.38□□□□□ -0.43
PABPC1-213ENST00000519848 BAG6P46379 1132 aa12.38□□□□□ -0.43
PABPC1-213ENST00000519848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
PABPC1-213ENST00000519848 TONSLQ96HA7 1378 aa12.38□□□□□ -0.43
PABPC1-213ENST00000519848 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
PABPC1-213ENST00000519848 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
PABPC1-213ENST00000519848 FBLN1P23142 703 aa12.37□□□□□ -0.43
PABPC1-213ENST00000519848 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-213ENST00000519848 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-213ENST00000519848 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
PABPC1-213ENST00000519848 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
PABPC1-213ENST00000519848 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
PABPC1-213ENST00000519848 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
PABPC1-213ENST00000519848 EVA1CP58658 441 aa12.36□□□□□ -0.43
PABPC1-213ENST00000519848 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
PABPC1-213ENST00000519848 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
PABPC1-213ENST00000519848 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-213ENST00000519848 BTAF1O14981 1849 aa12.34□□□□□ -0.43
PABPC1-213ENST00000519848 KIF20BQ96Q89 1820 aa12.34□□□□□ -0.43
PABPC1-213ENST00000519848 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
PABPC1-213ENST00000519848 APBA3O96018 575 aa12.34□□□□□ -0.43
PABPC1-213ENST00000519848 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
PABPC1-213ENST00000519848 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
PABPC1-213ENST00000519848 ERBB3P21860 1342 aa12.34□□□□□ -0.43
PABPC1-213ENST00000519848 TOM1L2Q6ZVM7 507 aa12.33□□□□□ -0.44
PABPC1-213ENST00000519848 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
PABPC1-213ENST00000519848 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
PABPC1-213ENST00000519848 TUBGCP6Q96RT7 1819 aa12.32□□□□□ -0.44
PABPC1-213ENST00000519848 BCL9O00512 1426 aa12.32□□□□□ -0.44
PABPC1-213ENST00000519848 USP47Q96K76 1375 aa12.31□□□□□ -0.44
PABPC1-213ENST00000519848 PDE3BQ13370 1112 aa12.31□□□□□ -0.44
PABPC1-213ENST00000519848 CARD10Q9BWT7 1032 aa12.31□□□□□ -0.44
PABPC1-213ENST00000519848 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-213ENST00000519848 MEGF6O75095 1541 aa12.31□□□□□ -0.44
PABPC1-213ENST00000519848 KCNQ2O43526 872 aa12.3□□□□□ -0.44
PABPC1-213ENST00000519848 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-213ENST00000519848 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
PABPC1-213ENST00000519848 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
PABPC1-213ENST00000519848 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
PABPC1-213ENST00000519848 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
PABPC1-213ENST00000519848 DDB1Q16531 1140 aa12.29□□□□□ -0.44
PABPC1-213ENST00000519848 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
PABPC1-213ENST00000519848 KCNH5Q8NCM2 988 aa12.28□□□□□ -0.44
PABPC1-213ENST00000519848 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
PABPC1-213ENST00000519848 PLCG2P16885 1265 aa12.27□□□□□ -0.45
PABPC1-213ENST00000519848 IRX5P78411 483 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-213ENST00000519848 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
PABPC1-213ENST00000519848 MIER1Q8N108 512 aa12.27□□□□□ -0.45
PABPC1-213ENST00000519848 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
PABPC1-213ENST00000519848 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
PABPC1-213ENST00000519848 NSD2O96028 1365 aa12.27□□□□□ -0.45
PABPC1-213ENST00000519848 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
PABPC1-213ENST00000519848 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
PABPC1-213ENST00000519848 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
PABPC1-213ENST00000519848 TMEM106CQ9BVX2 250 aa12.25□□□□□ -0.45
PABPC1-213ENST00000519848 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
PABPC1-213ENST00000519848 LY75O60449 1722 aa12.25□□□□□ -0.45
PABPC1-213ENST00000519848 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
PABPC1-213ENST00000519848 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
PABPC1-213ENST00000519848 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
PABPC1-213ENST00000519848 NINLQ9Y2I6 1382 aa12.23□□□□□ -0.45
PABPC1-213ENST00000519848 FYB1O15117 783 aa12.23□□□□□ -0.45
PABPC1-213ENST00000519848 HOXC9P31274 260 aa12.23□□□□□ -0.45
PABPC1-213ENST00000519848 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
PABPC1-213ENST00000519848 HDGFL2Q7Z4V5 671 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-213ENST00000519848 NLRP2Q9NX02 1062 aa12.23□□□□□ -0.45
PABPC1-213ENST00000519848 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
PABPC1-213ENST00000519848 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
PABPC1-213ENST00000519848 PLSCR1O15162 318 aa12.22□□□□□ -0.45
PABPC1-213ENST00000519848 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
PABPC1-213ENST00000519848 USHBP1Q8N6Y0 703 aa12.22□□□□□ -0.45
PABPC1-213ENST00000519848 IP6K1Q92551 441 aa12.22□□□□□ -0.45
PABPC1-213ENST00000519848 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-213ENST00000519848 NSD3Q9BZ95 1437 aa12.21□□□□□ -0.45
PABPC1-213ENST00000519848 QSER1Q2KHR3 1735 aa12.21□□□□□ -0.45
PABPC1-213ENST00000519848 KCNQ4P56696 695 aa12.21□□□□□ -0.45
PABPC1-213ENST00000519848 TXNRD1Q16881 649 aa12.21□□□□□ -0.45
PABPC1-213ENST00000519848 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
PABPC1-213ENST00000519848 TERF2IPQ9NYB0 399 aa12.21□□□□□ -0.45
PABPC1-213ENST00000519848 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
PABPC1-213ENST00000519848 IL2RBP14784 551 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms