RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
LAMA4-211ENST00000518842 AKAP12Q02952 1782 aa12.69□□□□□ -0.38
LAMA4-211ENST00000518842 CLSPNQ9HAW4 1339 aa12.69□□□□□ -0.38
LAMA4-211ENST00000518842 PSEN1P49768 467 aa12.69□□□□□ -0.38
LAMA4-211ENST00000518842 ARHGEF25Q86VW2 580 aa12.69□□□□□ -0.38
LAMA4-211ENST00000518842 NFAT5O94916 1531 aa12.68□□□□□ -0.38
LAMA4-211ENST00000518842 ST20-MTHFSA0A0A6YYL1 179 aa12.68□□□□□ -0.38
LAMA4-211ENST00000518842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
LAMA4-211ENST00000518842 A0A0G2JS52 829 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 EVA1CP58658 441 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 MYT1Q01538 1121 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 DEFB132Q7Z7B7 95 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 TCP11L2Q8N4U5 519 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 SLC12A5Q9H2X9 1139 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 THRAP3Q9Y2W1 955 aaKnown RBP12.67□□□□□ -0.38
LAMA4-211ENST00000518842 DISP2A7MBM2 1401 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
LAMA4-211ENST00000518842 COL18A1P39060 1754 aa12.66□□□□□ -0.38
LAMA4-211ENST00000518842 CRB1P82279 1406 aa12.66□□□□□ -0.38
LAMA4-211ENST00000518842 EDC4Q6P2E9 1401 aaKnown RBP12.66□□□□□ -0.38
LAMA4-211ENST00000518842 KCNH5Q8NCM2 988 aa12.66□□□□□ -0.38
LAMA4-211ENST00000518842 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
LAMA4-211ENST00000518842 USP54Q70EL1 1684 aa12.66□□□□□ -0.38
LAMA4-211ENST00000518842 USP47Q96K76 1375 aa12.66□□□□□ -0.38
LAMA4-211ENST00000518842 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
LAMA4-211ENST00000518842 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
LAMA4-211ENST00000518842 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
LAMA4-211ENST00000518842 ABCC6O95255 1503 aa12.65□□□□□ -0.38
LAMA4-211ENST00000518842 OVOS2A0A0J9YW53 1432 aa12.64□□□□□ -0.39
LAMA4-211ENST00000518842 OVOS2Q6IE36 1432 aa12.64□□□□□ -0.39
LAMA4-211ENST00000518842 HDGFL2Q7Z4V5 671 aaPredicted RBP12.64□□□□□ -0.39
LAMA4-211ENST00000518842 NME9Q86XW9 330 aa12.64□□□□□ -0.39
LAMA4-211ENST00000518842 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
LAMA4-211ENST00000518842 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
LAMA4-211ENST00000518842 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
LAMA4-211ENST00000518842 SRCAPQ6ZRS2 3230 aa12.64□□□□□ -0.39
LAMA4-211ENST00000518842 WDR17Q8IZU2 1322 aa12.63□□□□□ -0.39
LAMA4-211ENST00000518842 MMRN1Q13201 1228 aa12.63□□□□□ -0.39
LAMA4-211ENST00000518842 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
LAMA4-211ENST00000518842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.39
LAMA4-211ENST00000518842 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
LAMA4-211ENST00000518842 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
LAMA4-211ENST00000518842 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
LAMA4-211ENST00000518842 ZBTB7CA1YPR0 619 aa12.61□□□□□ -0.39
LAMA4-211ENST00000518842 BAG6P46379 1132 aa12.61□□□□□ -0.39
LAMA4-211ENST00000518842 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
LAMA4-211ENST00000518842 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
LAMA4-211ENST00000518842 SOX12O15370 315 aa12.6□□□□□ -0.39
LAMA4-211ENST00000518842 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
LAMA4-211ENST00000518842 EMP3P54852 163 aa12.59□□□□□ -0.39
LAMA4-211ENST00000518842 TMF1P82094 1093 aa12.59□□□□□ -0.39
LAMA4-211ENST00000518842 PDE3BQ13370 1112 aa12.59□□□□□ -0.39
LAMA4-211ENST00000518842 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
LAMA4-211ENST00000518842 RGPD1P0DJD0 1748 aa12.59□□□□□ -0.39
LAMA4-211ENST00000518842 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
LAMA4-211ENST00000518842 ERBB3P21860 1342 aa12.59□□□□□ -0.39
LAMA4-211ENST00000518842 BCL9O00512 1426 aa12.58□□□□□ -0.4
LAMA4-211ENST00000518842 TRIM37O94972 964 aa12.58□□□□□ -0.4
LAMA4-211ENST00000518842 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-211ENST00000518842 SPOCK2Q92563 424 aa12.58□□□□□ -0.4
LAMA4-211ENST00000518842 CAMKK2Q96RR4 588 aa12.58□□□□□ -0.4
LAMA4-211ENST00000518842 CDCA7Q9BWT1 371 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-211ENST00000518842 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
LAMA4-211ENST00000518842 LRRC37A3O60309 1634 aa12.58□□□□□ -0.4
LAMA4-211ENST00000518842 CCDC7Q96M83 1385 aa12.57□□□□□ -0.4
LAMA4-211ENST00000518842 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
LAMA4-211ENST00000518842 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
LAMA4-211ENST00000518842 OVOS2A0A0G2JMS6 1433 aa12.56□□□□□ -0.4
LAMA4-211ENST00000518842 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-211ENST00000518842 G3V3G9 751 aa12.56□□□□□ -0.4
LAMA4-211ENST00000518842 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
LAMA4-211ENST00000518842 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
LAMA4-211ENST00000518842 DDB1Q16531 1140 aa12.55□□□□□ -0.4
LAMA4-211ENST00000518842 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
LAMA4-211ENST00000518842 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-211ENST00000518842 IP6K1Q92551 441 aa12.54□□□□□ -0.4
LAMA4-211ENST00000518842 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
LAMA4-211ENST00000518842 FYB1O15117 783 aa12.53□□□□□ -0.4
LAMA4-211ENST00000518842 APBA3O96018 575 aa12.53□□□□□ -0.4
LAMA4-211ENST00000518842 ANKRD24Q8TF21 1146 aa12.53□□□□□ -0.4
LAMA4-211ENST00000518842 COG3Q96JB2 828 aa12.53□□□□□ -0.4
LAMA4-211ENST00000518842 MAP3K19Q56UN5 1328 aa12.53□□□□□ -0.4
LAMA4-211ENST00000518842 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
LAMA4-211ENST00000518842 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-211ENST00000518842 CARD14Q9BXL6 1004 aa12.51□□□□□ -0.41
LAMA4-211ENST00000518842 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
LAMA4-211ENST00000518842 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
LAMA4-211ENST00000518842 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-211ENST00000518842 FBLN1P23142 703 aa12.5□□□□□ -0.41
LAMA4-211ENST00000518842 HOXC9P31274 260 aa12.5□□□□□ -0.41
LAMA4-211ENST00000518842 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
LAMA4-211ENST00000518842 HS3ST6Q96QI5 342 aa12.5□□□□□ -0.41
LAMA4-211ENST00000518842 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-211ENST00000518842 NLRP2Q9NX02 1062 aa12.5□□□□□ -0.41
LAMA4-211ENST00000518842 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
LAMA4-211ENST00000518842 MYOM1P52179 1685 aa12.5□□□□□ -0.41
LAMA4-211ENST00000518842 RREB1Q92766 1687 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms