RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 HMOX1P09601 288 aa30.57■■■□□ 2.48
NKX6-3-201ENST00000518699 U2AF1L5P0DN76 240 aaPredicted RBP30.57■■■□□ 2.48
NKX6-3-201ENST00000518699 U2AF1Q01081 240 aaKnown RBP eCLIP30.57■■■□□ 2.48
NKX6-3-201ENST00000518699 DDB1Q16531 1140 aa30.56■■■□□ 2.48
NKX6-3-201ENST00000518699 MRS2Q9HD23 443 aa30.56■■■□□ 2.48
NKX6-3-201ENST00000518699 RSPH6AQ9H0K4 717 aa30.55■■■□□ 2.48
NKX6-3-201ENST00000518699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.54■■■□□ 2.48
NKX6-3-201ENST00000518699 CCER2I3L3R5 266 aa30.53■■■□□ 2.48
NKX6-3-201ENST00000518699 FCHSD2O94868 740 aa30.53■■■□□ 2.48
NKX6-3-201ENST00000518699 EXOC5O00471 708 aa30.52■■■□□ 2.48
NKX6-3-201ENST00000518699 WDR43Q15061 677 aaKnown RBP eCLIP30.52■■■□□ 2.48
NKX6-3-201ENST00000518699 ZCRB1Q8TBF4 217 aaKnown RBP30.5■■■□□ 2.47
NKX6-3-201ENST00000518699 PCDH11XQ9BZA7 1347 aa30.49■■■□□ 2.47
NKX6-3-201ENST00000518699 PCDH11YQ9BZA8 1340 aa30.49■■■□□ 2.47
NKX6-3-201ENST00000518699 PRKAR2BP31323 418 aa30.49■■■□□ 2.47
NKX6-3-201ENST00000518699 KRT27Q7Z3Y8 459 aa30.49■■■□□ 2.47
NKX6-3-201ENST00000518699 MIER1Q8N108 512 aa30.49■■■□□ 2.47
NKX6-3-201ENST00000518699 SPG7Q9UQ90 795 aa30.48■■■□□ 2.47
NKX6-3-201ENST00000518699 PDE3BQ13370 1112 aa30.47■■■□□ 2.47
NKX6-3-201ENST00000518699 AMOTQ4VCS5 1084 aa30.47■■■□□ 2.47
NKX6-3-201ENST00000518699 PNISRQ8TF01 805 aaKnown RBP30.47■■■□□ 2.47
NKX6-3-201ENST00000518699 BCL9O00512 1426 aa30.47■■■□□ 2.47
NKX6-3-201ENST00000518699 PLEKHO1Q53GL0 409 aaPredicted RBP30.46■■■□□ 2.47
NKX6-3-201ENST00000518699 MARCH10Q8NA82 808 aaPredicted RBP30.44■■■□□ 2.46
NKX6-3-201ENST00000518699 PNNQ9H307 717 aaKnown RBP30.44■■■□□ 2.46
NKX6-3-201ENST00000518699 SBF2Q86WG5 1849 aa30.43■■■□□ 2.46
NKX6-3-201ENST00000518699 PLEKHF1Q96S99 279 aa30.43■■■□□ 2.46
NKX6-3-201ENST00000518699 ADAMTS8Q9UP79 889 aa30.43■■■□□ 2.46
NKX6-3-201ENST00000518699 DOT1LQ8TEK3 1739 aa30.42■■■□□ 2.46
NKX6-3-201ENST00000518699 VIRMAQ69YN4 1812 aaKnown RBP30.42■■■□□ 2.46
NKX6-3-201ENST00000518699 CYP27B1O15528 508 aa30.41■■■□□ 2.46
NKX6-3-201ENST00000518699 TOGARAM1Q9Y4F4 1720 aa30.41■■■□□ 2.46
NKX6-3-201ENST00000518699 ADAMTS7Q9UKP4 1686 aa30.41■■■□□ 2.46
NKX6-3-201ENST00000518699 ILDR2Q71H61 639 aa30.4■■■□□ 2.46
NKX6-3-201ENST00000518699 PHACTR3Q96KR7 559 aa30.4■■■□□ 2.46
NKX6-3-201ENST00000518699 DLG5Q8TDM6 1919 aa30.4■■■□□ 2.46
NKX6-3-201ENST00000518699 ZNF530Q6P9A1 599 aaPredicted RBP30.39■■■□□ 2.45
NKX6-3-201ENST00000518699 DDX54Q8TDD1 881 aaKnown RBP30.39■■■□□ 2.45
NKX6-3-201ENST00000518699 NHSQ6T4R5 1651 aa30.39■■■□□ 2.45
NKX6-3-201ENST00000518699 SCN11AQ9UI33 1791 aa30.38■■■□□ 2.45
NKX6-3-201ENST00000518699 PHKG2P15735 406 aa30.38■■■□□ 2.45
NKX6-3-201ENST00000518699 MTHFSDQ2M296 383 aaKnown RBP30.38■■■□□ 2.45
NKX6-3-201ENST00000518699 IFNL2Q8IZJ0 200 aa30.38■■■□□ 2.45
NKX6-3-201ENST00000518699 GAS2L2Q8NHY3 880 aa30.38■■■□□ 2.45
NKX6-3-201ENST00000518699 NEFMP07197 916 aa30.37■■■□□ 2.45
NKX6-3-201ENST00000518699 MAPK8IP3Q9UPT6 1336 aa30.36■■■□□ 2.45
NKX6-3-201ENST00000518699 NKX1-1Q15270 411 aaPredicted RBP30.35■■■□□ 2.45
NKX6-3-201ENST00000518699 FAM182BQ5T319 152 aa30.35■■■□□ 2.45
NKX6-3-201ENST00000518699 FAM196AQ6ZSG2 479 aa30.35■■■□□ 2.45
NKX6-3-201ENST00000518699 EP400Q96L91 3159 aa30.34■■■□□ 2.45
NKX6-3-201ENST00000518699 C1orf141Q5JVX7 400 aa30.34■■■□□ 2.45
NKX6-3-201ENST00000518699 RUNDC1Q96C34 613 aa30.34■■■□□ 2.45
NKX6-3-201ENST00000518699 AKAP4Q5JQC9 854 aa30.33■■■□□ 2.45
NKX6-3-201ENST00000518699 TNS1Q9HBL0 1735 aaKnown RBP30.33■■■□□ 2.45
NKX6-3-201ENST00000518699 MAP3K5Q99683 1374 aa30.33■■■□□ 2.45
NKX6-3-201ENST00000518699 ITGB4P16144 1822 aa30.32■■■□□ 2.44
NKX6-3-201ENST00000518699 KDM6AO15550 1401 aaPredicted RBP30.32■■■□□ 2.44
NKX6-3-201ENST00000518699 HSP90AB1P08238 724 aaKnown RBP30.31■■■□□ 2.44
NKX6-3-201ENST00000518699 CCDC146Q8IYE0 955 aa30.31■■■□□ 2.44
NKX6-3-201ENST00000518699 MRC1P22897 1456 aa30.3■■■□□ 2.44
NKX6-3-201ENST00000518699 NFE2L2Q16236 605 aa30.28■■■□□ 2.44
NKX6-3-201ENST00000518699 FAM9BQ8IZU0 186 aa30.28■■■□□ 2.44
NKX6-3-201ENST00000518699 DCAF5Q96JK2 942 aa30.28■■■□□ 2.44
NKX6-3-201ENST00000518699 BTAF1O14981 1849 aa30.25■■■□□ 2.43
NKX6-3-201ENST00000518699 SIPA1L3O60292 1781 aaPredicted RBP30.25■■■□□ 2.43
NKX6-3-201ENST00000518699 GNAT3A8MTJ3 354 aa30.25■■■□□ 2.43
NKX6-3-201ENST00000518699 KAT6BQ8WYB5 2073 aa30.23■■■□□ 2.43
NKX6-3-201ENST00000518699 TMPOP42166 694 aaKnown RBP30.23■■■□□ 2.43
NKX6-3-201ENST00000518699 CEMIPQ8WUJ3 1361 aa30.21■■■□□ 2.43
NKX6-3-201ENST00000518699 RGPD3A6NKT7 1758 aaPredicted RBP30.21■■■□□ 2.43
NKX6-3-201ENST00000518699 RGPD4Q7Z3J3 1758 aa30.21■■■□□ 2.43
NKX6-3-201ENST00000518699 HTATSF1O43719 755 aaKnown RBP30.21■■■□□ 2.43
NKX6-3-201ENST00000518699 MPRIPQ6WCQ1 1025 aa30.21■■■□□ 2.43
NKX6-3-201ENST00000518699 ERVV-2B6SEH9 535 aa30.19■■■□□ 2.42
NKX6-3-201ENST00000518699 ACSBG1Q96GR2 724 aa30.19■■■□□ 2.42
NKX6-3-201ENST00000518699 APAF1O14727 1248 aa30.18■■■□□ 2.42
NKX6-3-201ENST00000518699 RNMTO43148 476 aaKnown RBP30.18■■■□□ 2.42
NKX6-3-201ENST00000518699 BCL11BQ9C0K0 894 aaPredicted RBP30.18■■■□□ 2.42
NKX6-3-201ENST00000518699 PAPPAQ13219 1627 aa30.18■■■□□ 2.42
NKX6-3-201ENST00000518699 TRIM37O94972 964 aa30.16■■■□□ 2.42
NKX6-3-201ENST00000518699 RIPK4P57078 832 aa30.16■■■□□ 2.42
NKX6-3-201ENST00000518699 LMOD3Q0VAK6 560 aa30.16■■■□□ 2.42
NKX6-3-201ENST00000518699 RTF1Q92541 710 aaKnown RBP30.16■■■□□ 2.42
NKX6-3-201ENST00000518699 KCNQ2O43526 872 aa30.15■■■□□ 2.42
NKX6-3-201ENST00000518699 PRIM1P49642 420 aaKnown RBP30.15■■■□□ 2.42
NKX6-3-201ENST00000518699 IL17REQ8NFR9 667 aa30.15■■■□□ 2.42
NKX6-3-201ENST00000518699 LGR6Q9HBX8 967 aa30.15■■■□□ 2.42
NKX6-3-201ENST00000518699 RRP7AQ9Y3A4 280 aaKnown RBP30.15■■■□□ 2.42
NKX6-3-201ENST00000518699 NCBP3Q53F19 620 aaKnown RBP30.14■■■□□ 2.41
NKX6-3-201ENST00000518699 PTF1AQ7RTS3 328 aa30.13■■■□□ 2.41
NKX6-3-201ENST00000518699 CCDC125Q86Z20 511 aa30.13■■■□□ 2.41
NKX6-3-201ENST00000518699 SYTL4Q96C24 671 aaPredicted RBP30.13■■■□□ 2.41
NKX6-3-201ENST00000518699 TMOD3Q9NYL9 352 aa30.13■■■□□ 2.41
NKX6-3-201ENST00000518699 MCM10Q7L590 875 aa30.12■■■□□ 2.41
NKX6-3-201ENST00000518699 SLC52A2Q9HAB3 445 aa30.12■■■□□ 2.41
NKX6-3-201ENST00000518699 LY75O60449 1722 aa30.12■■■□□ 2.41
NKX6-3-201ENST00000518699 UPF1Q92900 1129 aaKnown RBP eCLIP30.11■■■□□ 2.41
NKX6-3-201ENST00000518699 TRIM35Q9UPQ4 493 aa30.11■■■□□ 2.41
NKX6-3-201ENST00000518699 CABP4P57796 275 aa30.1■■■□□ 2.41
NKX6-3-201ENST00000518699 NEUROD2Q15784 382 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms