RNA–Protein interactions for RNA: ENST00000518646.5

EFCAB13-206, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 5

Gene EFCAB13, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-206ENST00000518646 ATP2B4P23634 1241 aa8.01□□□□□ -1.13
EFCAB13-206ENST00000518646 VAMP1P23763 118 aa8.01□□□□□ -1.13
EFCAB13-206ENST00000518646 CRTC2Q53ET0 693 aaPredicted RBP8.01□□□□□ -1.13
EFCAB13-206ENST00000518646 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
EFCAB13-206ENST00000518646 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
EFCAB13-206ENST00000518646 SPATA32Q96LK8 384 aa8.01□□□□□ -1.13
EFCAB13-206ENST00000518646 WDR7Q9Y4E6 1490 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 ZCCHC11Q5TAX3 1644 aaKnown RBP8□□□□□ -1.13
EFCAB13-206ENST00000518646 TK2O00142 265 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 CEBPAP49715 358 aaPredicted RBP8□□□□□ -1.13
EFCAB13-206ENST00000518646 NR1H3Q13133 447 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 PLEKHM2Q8IWE5 1019 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 FAM200AQ8TCP9 573 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 TATDN2Q93075 761 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 PPP1R1BQ9UD71 204 aaPredicted RBP8□□□□□ -1.13
EFCAB13-206ENST00000518646 NCOA1Q15788 1441 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 KIAA0556O60303 1618 aa8□□□□□ -1.13
EFCAB13-206ENST00000518646 GFRA3O60609 400 aa7.99□□□□□ -1.13
EFCAB13-206ENST00000518646 COL9A1P20849 921 aa7.99□□□□□ -1.13
EFCAB13-206ENST00000518646 LARP1Q6PKG0 1096 aaKnown RBP7.99□□□□□ -1.13
EFCAB13-206ENST00000518646 DEPDC4Q8N2C3 294 aa7.99□□□□□ -1.13
EFCAB13-206ENST00000518646 UBXN4Q92575 508 aa7.99□□□□□ -1.13
EFCAB13-206ENST00000518646 ARHGAP33O14559 1287 aa7.98□□□□□ -1.13
EFCAB13-206ENST00000518646 NAALADL2Q58DX5 795 aa7.98□□□□□ -1.13
EFCAB13-206ENST00000518646 MKRN1Q9UHC7 482 aaKnown RBP7.98□□□□□ -1.13
EFCAB13-206ENST00000518646 FANCAO15360 1455 aa7.98□□□□□ -1.13
EFCAB13-206ENST00000518646 SETBP1Q9Y6X0 1596 aa7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 UACAQ9BZF9 1416 aa7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 RASA1P20936 1047 aa7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 PTK7Q13308 1070 aa7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 MLECQ14165 292 aa7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 SF3A1Q15459 793 aaKnown RBP7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 CDCA7Q9BWT1 371 aaPredicted RBP7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 ARHGEF40Q8TER5 1519 aa7.97□□□□□ -1.13
EFCAB13-206ENST00000518646 SIGLEC1Q9BZZ2 1709 aa7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 PER1O15534 1290 aaPredicted RBP7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 RECKO95980 971 aa7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 SCNN1AP37088 669 aa7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 LHX6Q9UPM6 363 aa7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 PHLDB1Q86UU1 1377 aa7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 TNIKQ9UKE5 1360 aa7.96□□□□□ -1.14
EFCAB13-206ENST00000518646 ZBBXA8MT70 800 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 SMAPO00193 183 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 TAGLNQ01995 201 aaKnown RBP7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 DMRTA1Q5VZB9 504 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 PACS2Q86VP3 889 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 FAM174AQ8TBP5 190 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 FRMPD1Q5SYB0 1578 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 ALKQ9UM73 1620 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 PTPRKQ15262 1439 aa7.95□□□□□ -1.14
EFCAB13-206ENST00000518646 ERICH3Q5RHP9 1530 aa7.94□□□□□ -1.14
EFCAB13-206ENST00000518646 ATP5J2-PTCD1G3V325 749 aa7.94□□□□□ -1.14
EFCAB13-206ENST00000518646 NUDT7P0C024 238 aa7.94□□□□□ -1.14
EFCAB13-206ENST00000518646 FBXO33Q7Z6M2 555 aa7.94□□□□□ -1.14
EFCAB13-206ENST00000518646 ANKMY2Q8IV38 441 aa7.94□□□□□ -1.14
EFCAB13-206ENST00000518646 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
EFCAB13-206ENST00000518646 BCL11AQ9H165 835 aa7.94□□□□□ -1.14
EFCAB13-206ENST00000518646 TRIM6-TRIM34B2RNG4 842 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 PPP1R3GB7ZBB8 358 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 ABL1P00519 1130 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 SLC10A3P09131 477 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 NCOA4Q13772 614 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 SWI5Q1ZZU3 235 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 TSNAXIP1Q2TAA8 658 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 GRIPAP1Q4V328 841 aa7.93□□□□□ -1.14
EFCAB13-206ENST00000518646 SENP3-EIF4A1A0A087X0R7 540 aa7.92□□□□□ -1.14
EFCAB13-206ENST00000518646 H3BRB1 525 aa7.92□□□□□ -1.14
EFCAB13-206ENST00000518646 MAPK1P28482 360 aa7.92□□□□□ -1.14
EFCAB13-206ENST00000518646 C1orf216Q8TAB5 229 aa7.92□□□□□ -1.14
EFCAB13-206ENST00000518646 SYMPKQ92797 1274 aaKnown RBP7.92□□□□□ -1.14
EFCAB13-206ENST00000518646 TRIM52Q96A61 297 aa7.92□□□□□ -1.14
EFCAB13-206ENST00000518646 TUT1Q9H6E5 874 aaKnown RBP7.92□□□□□ -1.14
EFCAB13-206ENST00000518646 NCLP19338 710 aaKnown RBP7.91□□□□□ -1.14
EFCAB13-206ENST00000518646 YY1P25490 414 aa7.91□□□□□ -1.14
EFCAB13-206ENST00000518646 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
EFCAB13-206ENST00000518646 DPYDQ12882 1025 aa7.91□□□□□ -1.14
EFCAB13-206ENST00000518646 EGFL7Q9UHF1 273 aa7.91□□□□□ -1.14
EFCAB13-206ENST00000518646 ARHGEF12Q9NZN5 1544 aa7.91□□□□□ -1.14
EFCAB13-206ENST00000518646 CAMSAP1Q5T5Y3 1602 aa7.91□□□□□ -1.14
EFCAB13-206ENST00000518646 FUT2Q10981 343 aa7.9□□□□□ -1.14
EFCAB13-206ENST00000518646 ZNF211Q13398 564 aaPredicted RBP7.9□□□□□ -1.14
EFCAB13-206ENST00000518646 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
EFCAB13-206ENST00000518646 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.14
EFCAB13-206ENST00000518646 ANO2Q9NQ90 1003 aa7.9□□□□□ -1.14
EFCAB13-206ENST00000518646 CPS1P31327 1500 aa7.89□□□□□ -1.15
EFCAB13-206ENST00000518646 AKNAQ7Z591 1439 aa7.89□□□□□ -1.15
EFCAB13-206ENST00000518646 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
EFCAB13-206ENST00000518646 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
EFCAB13-206ENST00000518646 ASB16Q96NS5 453 aa7.89□□□□□ -1.15
EFCAB13-206ENST00000518646 BCL2L12Q9HB09 334 aa7.89□□□□□ -1.15
EFCAB13-206ENST00000518646 CARMIL2Q6F5E8 1435 aa7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 PRMT3O60678 531 aa7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 PTPREP23469 700 aa7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 SWT1Q5T5J6 900 aaKnown RBP7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 ZSCAN29Q8IWY8 852 aaPredicted RBP7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 ANKRD13AQ8IZ07 590 aa7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 OGFOD1Q8N543 542 aa7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 ZNF594Q96JF6 807 aaPredicted RBP7.88□□□□□ -1.15
EFCAB13-206ENST00000518646 LZTS3O60299 673 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms