RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 PRR20BP86481 221 aa8.84□□□□□ -0.99
MRPS28-203ENST00000518371 PRR20AP86496 221 aa8.84□□□□□ -0.99
MRPS28-203ENST00000518371 KIF1BO60333 1816 aa8.84□□□□□ -0.99
MRPS28-203ENST00000518371 LRRC7Q96NW7 1537 aa8.84□□□□□ -0.99
MRPS28-203ENST00000518371 TMEM94Q12767 1356 aa8.84□□□□□ -0.99
MRPS28-203ENST00000518371 PIK3R4Q99570 1358 aa8.84□□□□□ -0.99
MRPS28-203ENST00000518371 SPATA31E1Q6ZUB1 1445 aa8.83□□□□□ -1
MRPS28-203ENST00000518371 COPS2P61201 443 aa8.83□□□□□ -1
MRPS28-203ENST00000518371 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
MRPS28-203ENST00000518371 METP08581 1390 aa8.83□□□□□ -1
MRPS28-203ENST00000518371 NEXMIFQ5QGS0 1516 aa8.82□□□□□ -1
MRPS28-203ENST00000518371 NEUROD1Q13562 356 aa8.82□□□□□ -1
MRPS28-203ENST00000518371 EMID1Q96A84 441 aaPredicted RBP8.82□□□□□ -1
MRPS28-203ENST00000518371 PCGF6Q9BYE7 350 aa8.82□□□□□ -1
MRPS28-203ENST00000518371 RNF40O75150 1001 aa8.81□□□□□ -1
MRPS28-203ENST00000518371 PTGDRQ13258 359 aa8.81□□□□□ -1
MRPS28-203ENST00000518371 SPRYD7Q5W111 196 aa8.81□□□□□ -1
MRPS28-203ENST00000518371 ZNF598Q86UK7 904 aaKnown RBP8.81□□□□□ -1
MRPS28-203ENST00000518371 STK26Q9P289 416 aa8.81□□□□□ -1
MRPS28-203ENST00000518371 STK17AQ9UEE5 414 aa8.81□□□□□ -1
MRPS28-203ENST00000518371 FAM187AA6NFU0 413 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 ZPR1O75312 459 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 ATF3P18847 181 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 CFAP70Q5T0N1 1121 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 TMEM132EQ6IEE7 984 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 SIN3AQ96ST3 1273 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 C19orf44Q9H6X5 657 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 C14orf93Q9H972 538 aaKnown RBP8.8□□□□□ -1
MRPS28-203ENST00000518371 MSH6P52701 1360 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 PTPRUQ92729 1446 aa8.8□□□□□ -1
MRPS28-203ENST00000518371 DIP2AQ14689 1571 aa8.79□□□□□ -1
MRPS28-203ENST00000518371 SETBP1Q9Y6X0 1596 aa8.79□□□□□ -1
MRPS28-203ENST00000518371 NKTRP30414 1462 aaKnown RBP8.79□□□□□ -1
MRPS28-203ENST00000518371 RNF223E7ERA6 249 aa8.79□□□□□ -1
MRPS28-203ENST00000518371 EYA1Q99502 592 aa8.79□□□□□ -1
MRPS28-203ENST00000518371 SLAIN2Q9P270 581 aa8.79□□□□□ -1
MRPS28-203ENST00000518371 STRCP1A6NGW2 1772 aa8.78□□□□□ -1
MRPS28-203ENST00000518371 AAASQ9NRG9 546 aa8.78□□□□□ -1
MRPS28-203ENST00000518371 NCOA3Q9Y6Q9 1424 aa8.78□□□□□ -1
MRPS28-203ENST00000518371 DHX57Q6P158 1386 aaKnown RBP8.77□□□□□ -1.01
MRPS28-203ENST00000518371 ALKQ9UM73 1620 aa8.77□□□□□ -1.01
MRPS28-203ENST00000518371 ST8SIA5O15466 376 aa8.77□□□□□ -1.01
MRPS28-203ENST00000518371 WFS1O76024 890 aa8.77□□□□□ -1.01
MRPS28-203ENST00000518371 HSPA1LP34931 641 aa8.77□□□□□ -1.01
MRPS28-203ENST00000518371 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1.01
MRPS28-203ENST00000518371 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
MRPS28-203ENST00000518371 SWT1Q5T5J6 900 aaKnown RBP8.77□□□□□ -1.01
MRPS28-203ENST00000518371 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
MRPS28-203ENST00000518371 NUTM2FA1L443 756 aa8.76□□□□□ -1.01
MRPS28-203ENST00000518371 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
MRPS28-203ENST00000518371 NWD1Q149M9 1564 aa8.76□□□□□ -1.01
MRPS28-203ENST00000518371 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
MRPS28-203ENST00000518371 CHD2O14647 1828 aaKnown RBP8.75□□□□□ -1.01
MRPS28-203ENST00000518371 PIK3C2GO75747 1445 aa8.75□□□□□ -1.01
MRPS28-203ENST00000518371 GDF9O60383 454 aa8.75□□□□□ -1.01
MRPS28-203ENST00000518371 WAPLQ7Z5K2 1190 aa8.75□□□□□ -1.01
MRPS28-203ENST00000518371 L3MBTL2Q969R5 705 aa8.75□□□□□ -1.01
MRPS28-203ENST00000518371 POGKQ9P215 609 aa8.75□□□□□ -1.01
MRPS28-203ENST00000518371 PPLO60437 1756 aa8.75□□□□□ -1.01
MRPS28-203ENST00000518371 LRPPRCP42704 1394 aaKnown RBP8.74□□□□□ -1.01
MRPS28-203ENST00000518371 ABCC11Q96J66 1382 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 ROBO2Q9HCK4 1378 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 ZNF697Q5TEC3 545 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 TRAK1Q9UPV9 953 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 MYOM2P54296 1465 aa8.74□□□□□ -1.01
MRPS28-203ENST00000518371 FAM135BQ49AJ0 1406 aa8.73□□□□□ -1.01
MRPS28-203ENST00000518371 YTHDC2Q9H6S0 1430 aaKnown RBP8.73□□□□□ -1.01
MRPS28-203ENST00000518371 TNFRSF10AO00220 468 aa8.73□□□□□ -1.01
MRPS28-203ENST00000518371 SAFB2Q14151 953 aaKnown RBP eCLIP8.73□□□□□ -1.01
MRPS28-203ENST00000518371 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
MRPS28-203ENST00000518371 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
MRPS28-203ENST00000518371 ADGRG1Q9Y653 693 aa8.73□□□□□ -1.01
MRPS28-203ENST00000518371 NRXN1Q9ULB1 1477 aa8.72□□□□□ -1.01
MRPS28-203ENST00000518371 WIPF1O43516 503 aa8.72□□□□□ -1.01
MRPS28-203ENST00000518371 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
MRPS28-203ENST00000518371 ANKLE1Q8NAG6 615 aa8.72□□□□□ -1.01
MRPS28-203ENST00000518371 PRAM1Q96QH2 718 aa8.72□□□□□ -1.01
MRPS28-203ENST00000518371 PTCH1Q13635 1447 aa8.71□□□□□ -1.01
MRPS28-203ENST00000518371 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
MRPS28-203ENST00000518371 TONSLQ96HA7 1378 aa8.71□□□□□ -1.02
MRPS28-203ENST00000518371 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.02
MRPS28-203ENST00000518371 FCHSD2O94868 740 aa8.7□□□□□ -1.02
MRPS28-203ENST00000518371 BRINP3Q76B58 766 aa8.7□□□□□ -1.02
MRPS28-203ENST00000518371 SLF2Q8IX21 1173 aa8.7□□□□□ -1.02
MRPS28-203ENST00000518371 XRN1Q8IZH2 1706 aaKnown RBP8.7□□□□□ -1.02
MRPS28-203ENST00000518371 PLEKHH1Q9ULM0 1364 aa8.7□□□□□ -1.02
MRPS28-203ENST00000518371 IFT172Q9UG01 1749 aa8.69□□□□□ -1.02
MRPS28-203ENST00000518371 XIRP1Q702N8 1843 aaKnown RBP8.69□□□□□ -1.02
MRPS28-203ENST00000518371 PPEF1O14829 653 aaPredicted RBP8.69□□□□□ -1.02
MRPS28-203ENST00000518371 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
MRPS28-203ENST00000518371 ESCO1Q5FWF5 840 aa8.69□□□□□ -1.02
MRPS28-203ENST00000518371 CCER1Q8TC90 406 aaPredicted RBP8.69□□□□□ -1.02
MRPS28-203ENST00000518371 ORAI2Q96SN7 254 aa8.69□□□□□ -1.02
MRPS28-203ENST00000518371 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
MRPS28-203ENST00000518371 TECPR2O15040 1411 aa8.69□□□□□ -1.02
MRPS28-203ENST00000518371 DCCP43146 1447 aa8.69□□□□□ -1.02
MRPS28-203ENST00000518371 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms