RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 POTEFA5A3E0 1075 aa5.64□□□□□ -1.51
SCARNA13-201ENST00000516672 RANGAP1P46060 587 aaPredicted RBP5.64□□□□□ -1.51
SCARNA13-201ENST00000516672 COL23A1Q86Y22 540 aaPredicted RBP5.64□□□□□ -1.51
SCARNA13-201ENST00000516672 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.64□□□□□ -1.51
SCARNA13-201ENST00000516672 HIRIP3Q9BW71 556 aaPredicted RBP5.64□□□□□ -1.51
SCARNA13-201ENST00000516672 PRDM11Q9NQV5 511 aa5.64□□□□□ -1.51
SCARNA13-201ENST00000516672 ZC3H4Q9UPT8 1303 aaKnown RBP5.64□□□□□ -1.51
SCARNA13-201ENST00000516672 EYSQ5T1H1 3165 aa5.63□□□□□ -1.51
SCARNA13-201ENST00000516672 BRPF1P55201 1214 aaPredicted RBP5.63□□□□□ -1.51
SCARNA13-201ENST00000516672 PRO3102Q9H379 93 aa5.63□□□□□ -1.51
SCARNA13-201ENST00000516672 ARHGEF10O15013 1369 aa5.63□□□□□ -1.51
SCARNA13-201ENST00000516672 BCL9O00512 1426 aa5.63□□□□□ -1.51
SCARNA13-201ENST00000516672 MBD5Q9P267 1494 aa5.63□□□□□ -1.51
SCARNA13-201ENST00000516672 MYO5BQ9ULV0 1848 aa5.62□□□□□ -1.51
SCARNA13-201ENST00000516672 LAMA3Q16787 3333 aa5.62□□□□□ -1.51
SCARNA13-201ENST00000516672 DDB1Q16531 1140 aa5.62□□□□□ -1.51
SCARNA13-201ENST00000516672 CIAPIN1Q6FI81 312 aa5.62□□□□□ -1.51
SCARNA13-201ENST00000516672 GPR153Q6NV75 609 aa5.62□□□□□ -1.51
SCARNA13-201ENST00000516672 MARCH10Q8NA82 808 aaPredicted RBP5.62□□□□□ -1.51
SCARNA13-201ENST00000516672 A0A0G2JLW4 131 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 NUTM2FA1L443 756 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 METP08581 1390 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 EVA1CP58658 441 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 PSME1Q06323 249 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 LARP1Q6PKG0 1096 aaKnown RBP5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 KNDC1Q76NI1 1749 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 N4BP2Q86UW6 1770 aaPredicted RBP5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 RPTORQ8N122 1335 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 KIAA0232Q92628 1395 aa5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 THRAP3Q9Y2W1 955 aaKnown RBP5.61□□□□□ -1.51
SCARNA13-201ENST00000516672 KIAA1551Q9HCM1 1747 aa5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 KIF7Q2M1P5 1343 aa5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 CHRNA2Q15822 529 aa5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 PKN2Q16513 984 aaKnown RBP5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 LDHDQ86WU2 507 aa5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 C1QTNF1Q9BXJ1 281 aa5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 CACNA1BQ00975 2339 aa5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 SETXQ7Z333 2677 aaKnown RBP5.6□□□□□ -1.51
SCARNA13-201ENST00000516672 TTC28Q96AY4 2481 aa5.59□□□□□ -1.51
SCARNA13-201ENST00000516672 SBNO1A3KN83 1393 aa5.59□□□□□ -1.51
SCARNA13-201ENST00000516672 A0A1W2PPC1 479 aa5.59□□□□□ -1.51
SCARNA13-201ENST00000516672 SBF1O95248 1867 aa5.59□□□□□ -1.51
SCARNA13-201ENST00000516672 CENPFP49454 3210 aa5.59□□□□□ -1.52
SCARNA13-201ENST00000516672 CRB1P82279 1406 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 COL18A1P39060 1754 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 PAPPA2Q9BXP8 1791 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 KCNQ4P56696 695 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 LRFN3Q9BTN0 628 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 SLC52A1Q9NWF4 448 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 GCC2Q8IWJ2 1684 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 QRICH2Q9H0J4 1663 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 TRPM1Q7Z4N2 1603 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 CCDC18Q5T9S5 1454 aa5.58□□□□□ -1.52
SCARNA13-201ENST00000516672 KIF1AQ12756 1690 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 NHSQ6T4R5 1651 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 EN2P19622 333 aaPredicted RBP5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 TGFB2P61812 414 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 RASSF7Q02833 373 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 TJAP1Q5JTD0 557 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 SLC27A3Q5K4L6 730 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 DPY19L2Q6NUT2 758 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 SMIM5Q71RC9 77 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 LURAP1LQ8IV03 231 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 ACSBG1Q96GR2 724 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 CFDP1Q9UEE9 299 aaPredicted RBP5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 ATRXP46100 2492 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 TIAM2Q8IVF5 1701 aa5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 KDM6AO15550 1401 aaPredicted RBP5.57□□□□□ -1.52
SCARNA13-201ENST00000516672 PRUNE2Q8WUY3 3088 aa5.56□□□□□ -1.52
SCARNA13-201ENST00000516672 KMT2BQ9UMN6 2715 aaPredicted RBP5.56□□□□□ -1.52
SCARNA13-201ENST00000516672 CDC42BPGQ6DT37 1551 aa5.56□□□□□ -1.52
SCARNA13-201ENST00000516672 ARFGEF1Q9Y6D6 1849 aa5.56□□□□□ -1.52
SCARNA13-201ENST00000516672 AKAP4Q5JQC9 854 aa5.56□□□□□ -1.52
SCARNA13-201ENST00000516672 DCAF5Q96JK2 942 aa5.56□□□□□ -1.52
SCARNA13-201ENST00000516672 AKAP12Q02952 1782 aa5.56□□□□□ -1.52
SCARNA13-201ENST00000516672 ROBO2Q9HCK4 1378 aa5.55□□□□□ -1.52
SCARNA13-201ENST00000516672 MINK1Q8N4C8 1332 aaPredicted RBP5.55□□□□□ -1.52
SCARNA13-201ENST00000516672 ZNF644Q9H582 1327 aaPredicted RBP5.55□□□□□ -1.52
SCARNA13-201ENST00000516672 DPEP1P16444 411 aa5.55□□□□□ -1.52
SCARNA13-201ENST00000516672 SAGE1Q9NXZ1 904 aa5.55□□□□□ -1.52
SCARNA13-201ENST00000516672 CLEC11AQ9Y240 323 aa5.55□□□□□ -1.52
SCARNA13-201ENST00000516672 LMNB1P20700 586 aa5.54□□□□□ -1.52
SCARNA13-201ENST00000516672 FBXO46Q6PJ61 603 aaPredicted RBP5.54□□□□□ -1.52
SCARNA13-201ENST00000516672 CNTROBQ8N137 903 aa5.54□□□□□ -1.52
SCARNA13-201ENST00000516672 GUCD1Q96NT3 240 aa5.54□□□□□ -1.52
SCARNA13-201ENST00000516672 DDX21Q9NR30 783 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCARNA13-201ENST00000516672 TLL2Q9Y6L7 1015 aa5.54□□□□□ -1.52
SCARNA13-201ENST00000516672 BTAF1O14981 1849 aa5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 RBBP6Q7Z6E9 1792 aaKnown RBP5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 EAPPQ56P03 285 aaPredicted RBP5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 MAP1SQ66K74 1059 aaPredicted RBP5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 CNKSR2Q8WXI2 1034 aa5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 ZIC5Q96T25 663 aa5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 BRCA1P38398 1863 aaKnown RBP5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 CEP290O15078 2479 aa5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 TRANK1O15050 2925 aa5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 MUC6Q6W4X9 2439 aa5.53□□□□□ -1.52
SCARNA13-201ENST00000516672 CLTCL1P53675 1640 aa5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 CRYBG1Q9Y4K1 1723 aa5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 ST18O60284 1047 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms