RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 NLRP1Q9C000 1473 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SOWAHBA6NEL2 793 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 HOXA2O43364 376 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 HRO43593 1189 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 TMEM259Q4ZIN3 620 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RTL5Q5HYW3 569 aaPredicted RBP3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 GGT6Q6P531 493 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CABLES1Q8TDN4 633 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 HLA-CQ95604 372 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PRM3Q9NNZ6 103 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 KDM5AP29375 1690 aaKnown RBP3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ZMYM3Q14202 1370 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PIK3C2BO00750 1634 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CEP152O94986 1710 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ACTN4O43707 911 aaKnown RBP3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 LILRB3O75022 631 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 GJA5P36382 358 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 MTMR2Q13614 643 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 QPCTQ16769 361 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 Q3C1V9 767 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SYMPKQ92797 1274 aaKnown RBP3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ESF1Q9H501 851 aaKnown RBP3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 WBP1LQ9NX94 342 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PCDHB3Q9Y5E6 796 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 E9PCH4 1651 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 C3P01024 1663 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ZNF142P52746 1687 aaPredicted RBP3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CLTCQ00610 1675 aaKnown RBP3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RIMS1Q86UR5 1692 aaKnown RBP3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PREX1Q8TCU6 1659 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 DHX57Q6P158 1386 aaKnown RBP3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PLA2R1Q13018 1463 aa3.22□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SYNMO15061 1565 aa3.21□□□□□ -1.89
SCARNA16.3-201ENST00000516595 UHRF1BP1Q6BDS2 1440 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 ADGRB3O60242 1522 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SPDYE5A6NIY4 337 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 NR1I2O75469 434 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 COPS2P61201 443 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 CTDSPL2Q05D32 466 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 TUSC1Q2TAM9 212 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 PRPF38BQ5VTL8 546 aaKnown RBP3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SCUBE3Q8IX30 993 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 BANK1Q8NDB2 785 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 HELBQ8NG08 1087 aaPredicted RBP3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 MPHOSPH9Q99550 1183 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 PCGF6Q9BYE7 350 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SNRKQ9NRH2 765 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SLC52A1Q9NWF4 448 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 PCDHGC3Q9UN70 934 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SLC27A5Q9Y2P5 690 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 MYO3AQ8NEV4 1616 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 TNRQ92752 1358 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 ANKRD30BQ9BXX2 1392 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SPHKAPQ2M3C7 1700 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 A2ML1A8K2U0 1454 aa3.21□□□□□ -1.9
SCARNA16.3-201ENST00000516595 CCDC144AA2RUR9 1427 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SLIT1O75093 1534 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 APBB1O00213 710 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 FMNL1O95466 1100 aaPredicted RBP3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 APLP1P51693 650 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 MLECQ14165 292 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 PPP2R2DQ66LE6 453 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 BLOC1S3Q6QNY0 202 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 WWC1Q8IX03 1113 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 PRR7Q8TB68 274 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 TRIM52Q96A61 297 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 CLUAP1Q96AJ1 413 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 KRTAP3-3Q9BYR6 98 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 KRTAP3-2Q9BYR7 98 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 ARHGAP23Q9P227 1491 aa3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 CEP170BQ9Y4F5 1589 aaPredicted RBP3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SETD1BQ9UPS6 1966 aaKnown RBP3.2□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SPATA31E1Q6ZUB1 1445 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 CLTCL1P53675 1640 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 ABL2P42684 1182 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 MORN1Q5T089 497 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 FBXO31Q5XUX0 539 aaPredicted RBP3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 THSD4Q6ZMP0 1018 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 ARID3AQ99856 593 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 USB1Q9BQ65 265 aaKnown RBP3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 MYOM2P54296 1465 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 LMTK3Q96Q04 1460 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 UGGT1Q9NYU2 1555 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 TMEM131LA2VDJ0 1609 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 ZFYVE9O95405 1425 aa3.19□□□□□ -1.9
SCARNA16.3-201ENST00000516595 MED14O60244 1454 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 NRXN1Q9ULB1 1477 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 TMEM2Q9UHN6 1383 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 CFAP99D6REC4 459 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 USP17L8P0C7I0 530 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 IDI1Q13907 227 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 MCM6Q14566 821 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 RNF19BQ6ZMZ0 732 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 RETREG3Q86VR2 466 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 CCDC24Q8N4L8 307 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 LRRN4Q8WUT4 740 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 SPSB2Q99619 263 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 GDPD2Q9HCC8 539 aa3.18□□□□□ -1.9
SCARNA16.3-201ENST00000516595 ZNF330Q9Y3S2 320 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms