RNA–Protein interactions for RNA: ENST00000515090.5

GPM6A-221, Transcript of glycoprotein M6A, human

TSL 2 BASIC

Gene GPM6A, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPM6A-221	ENST00000515090	CARD11	Q9BXL7	1154 aa		11.38	□□□□□ -0.59
GPM6A-221	ENST00000515090	TTC21B	Q7Z4L5	1316 aa		11.38	□□□□□ -0.59
GPM6A-221	ENST00000515090	SOX12	O15370	315 aa		11.37	□□□□□ -0.59
GPM6A-221	ENST00000515090	EVA1C	P58658	441 aa		11.37	□□□□□ -0.59
GPM6A-221	ENST00000515090	COL18A1	P39060	1754 aa		11.37	□□□□□ -0.59
GPM6A-221	ENST00000515090	AKAP12	Q02952	1782 aa		11.37	□□□□□ -0.59
GPM6A-221	ENST00000515090	RGPD5	Q99666	1765 aa		11.37	□□□□□ -0.59
GPM6A-221	ENST00000515090	CPD	O75976	1380 aa		11.37	□□□□□ -0.59
GPM6A-221	ENST00000515090	EN1	Q05925	392 aa	Predicted RBP	11.36	□□□□□ -0.59
GPM6A-221	ENST00000515090	SLC12A5	Q9H2X9	1139 aa		11.36	□□□□□ -0.59
GPM6A-221	ENST00000515090	CPSF1	Q10570	1443 aa	Known RBP	11.36	□□□□□ -0.59
GPM6A-221	ENST00000515090	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
GPM6A-221	ENST00000515090	CD163L1	Q9NR16	1453 aa		11.35	□□□□□ -0.59
GPM6A-221	ENST00000515090	SLIT3	O75094	1523 aa		11.35	□□□□□ -0.59
GPM6A-221	ENST00000515090	TONSL	Q96HA7	1378 aa		11.35	□□□□□ -0.59
GPM6A-221	ENST00000515090	COL5A2	P05997	1499 aa	Predicted RBP	11.35	□□□□□ -0.59
GPM6A-221	ENST00000515090	CHRM1	P11229	460 aa	Predicted RBP	11.35	□□□□□ -0.59
GPM6A-221	ENST00000515090	VASP	P50552	380 aa	Predicted RBP	11.35	□□□□□ -0.59
GPM6A-221	ENST00000515090	TRIM37	O94972	964 aa		11.34	□□□□□ -0.59
GPM6A-221	ENST00000515090	EMP3	P54852	163 aa		11.34	□□□□□ -0.59
GPM6A-221	ENST00000515090	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
GPM6A-221	ENST00000515090	TESK2	Q96S53	571 aa		11.34	□□□□□ -0.59
GPM6A-221	ENST00000515090	PSD	A5PKW4	1024 aa	Predicted RBP	11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	PSEN1	P49768	467 aa		11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	EZH2	Q15910	746 aa	Known RBP	11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	BARGIN	Q6ZT62	677 aa		11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	ARHGEF25	Q86VW2	580 aa		11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	NME9	Q86XW9	330 aa		11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	TCP11L2	Q8N4U5	519 aa		11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	KTN1	Q86UP2	1357 aa	Known RBP	11.33	□□□□□ -0.6
GPM6A-221	ENST00000515090	TNS1	Q9HBL0	1735 aa	Known RBP	11.32	□□□□□ -0.6
GPM6A-221	ENST00000515090	ST20-MTHFS	A0A0A6YYL1	179 aa		11.32	□□□□□ -0.6
GPM6A-221	ENST00000515090	SF3B2	Q13435	895 aa	Known RBP	11.32	□□□□□ -0.6
GPM6A-221	ENST00000515090	PTF1A	Q7RTS3	328 aa		11.32	□□□□□ -0.6
GPM6A-221	ENST00000515090	TMC1	Q8TDI8	760 aa		11.32	□□□□□ -0.6
GPM6A-221	ENST00000515090	FBLN1	P23142	703 aa		11.31	□□□□□ -0.6
GPM6A-221	ENST00000515090	BRD4	O60885	1362 aa	Predicted RBP	11.31	□□□□□ -0.6
GPM6A-221	ENST00000515090	AATK	Q6ZMQ8	1374 aa		11.31	□□□□□ -0.6
GPM6A-221	ENST00000515090	SBNO2	Q9Y2G9	1366 aa		11.31	□□□□□ -0.6
GPM6A-221	ENST00000515090	MON2	Q7Z3U7	1717 aa		11.31	□□□□□ -0.6
GPM6A-221	ENST00000515090	NFAT5	O94916	1531 aa		11.3	□□□□□ -0.6
GPM6A-221	ENST00000515090	CAMKK2	Q96RR4	588 aa		11.3	□□□□□ -0.6
GPM6A-221	ENST00000515090	RGPD1	P0DJD0	1748 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090	CRB1	P82279	1406 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090	TTC21A	Q8NDW8	1320 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090	POTEB3	A0JP26	581 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090	BAG6	P46379	1132 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090	PDE3B	Q13370	1112 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090	POTEB	Q6S5H4	581 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090	FAM196A	Q6ZSG2	479 aa		11.29	□□□□□ -0.6
GPM6A-221	ENST00000515090		A0A1W2PP64	1363 aa		11.28	□□□□□ -0.6
GPM6A-221	ENST00000515090	APBA3	O96018	575 aa		11.28	□□□□□ -0.6
GPM6A-221	ENST00000515090	TOM1L2	Q6ZVM7	507 aa		11.28	□□□□□ -0.6
GPM6A-221	ENST00000515090	KRTAP3-3	Q9BYR6	98 aa		11.28	□□□□□ -0.6
GPM6A-221	ENST00000515090	KRTAP3-2	Q9BYR7	98 aa		11.28	□□□□□ -0.6
GPM6A-221	ENST00000515090	PARP4	Q9UKK3	1724 aa	Known RBP	11.27	□□□□□ -0.61
GPM6A-221	ENST00000515090	WDR17	Q8IZU2	1322 aa		11.27	□□□□□ -0.61
GPM6A-221	ENST00000515090	R3HDM1	Q15032	1099 aa	Known RBP	11.27	□□□□□ -0.61
GPM6A-221	ENST00000515090	MARCH10	Q8NA82	808 aa	Predicted RBP	11.27	□□□□□ -0.61
GPM6A-221	ENST00000515090	THRAP3	Q9Y2W1	955 aa	Known RBP	11.27	□□□□□ -0.61
GPM6A-221	ENST00000515090	PEAK1	Q9H792	1746 aa		11.27	□□□□□ -0.61
GPM6A-221	ENST00000515090	USP31	Q70CQ4	1352 aa		11.26	□□□□□ -0.61
GPM6A-221	ENST00000515090	PDAP1	Q13442	181 aa	Known RBP	11.26	□□□□□ -0.61
GPM6A-221	ENST00000515090	HS3ST6	Q96QI5	342 aa		11.26	□□□□□ -0.61
GPM6A-221	ENST00000515090	SBF2	Q86WG5	1849 aa		11.26	□□□□□ -0.61
GPM6A-221	ENST00000515090	LRRC37A3	O60309	1634 aa		11.26	□□□□□ -0.61
GPM6A-221	ENST00000515090	FAM205C	A6NFA0	338 aa		11.25	□□□□□ -0.61
GPM6A-221	ENST00000515090		G3V3G9	751 aa		11.25	□□□□□ -0.61
GPM6A-221	ENST00000515090	KCNH5	Q8NCM2	988 aa		11.25	□□□□□ -0.61
GPM6A-221	ENST00000515090	DISP2	A7MBM2	1401 aa		11.25	□□□□□ -0.61
GPM6A-221	ENST00000515090	LTN1	O94822	1766 aa		11.25	□□□□□ -0.61
GPM6A-221	ENST00000515090	WNK3	Q9BYP7	1800 aa		11.24	□□□□□ -0.61
GPM6A-221	ENST00000515090	USP54	Q70EL1	1684 aa		11.24	□□□□□ -0.61
GPM6A-221	ENST00000515090	CENPB	P07199	599 aa	Predicted RBP	11.24	□□□□□ -0.61
GPM6A-221	ENST00000515090	CSB-PGBD3	P0DP91	1061 aa		11.24	□□□□□ -0.61
GPM6A-221	ENST00000515090	DDB1	Q16531	1140 aa		11.24	□□□□□ -0.61
GPM6A-221	ENST00000515090	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.24	□□□□□ -0.61
GPM6A-221	ENST00000515090	CARD10	Q9BWT7	1032 aa		11.24	□□□□□ -0.61
GPM6A-221	ENST00000515090	OVOS2	A0A0J9YW53	1432 aa		11.23	□□□□□ -0.61
GPM6A-221	ENST00000515090	OVOS2	Q6IE36	1432 aa		11.23	□□□□□ -0.61
GPM6A-221	ENST00000515090	EDC4	Q6P2E9	1401 aa	Known RBP	11.23	□□□□□ -0.61
GPM6A-221	ENST00000515090	KCNQ2	O43526	872 aa		11.22	□□□□□ -0.61
GPM6A-221	ENST00000515090	PUS7	Q96PZ0	661 aa	Known RBP	11.22	□□□□□ -0.61
GPM6A-221	ENST00000515090	USP47	Q96K76	1375 aa		11.22	□□□□□ -0.61
GPM6A-221	ENST00000515090	NUP188	Q5SRE5	1749 aa		11.22	□□□□□ -0.61
GPM6A-221	ENST00000515090	RREB1	Q92766	1687 aa		11.21	□□□□□ -0.61
GPM6A-221	ENST00000515090	ANKRD24	Q8TF21	1146 aa		11.21	□□□□□ -0.61
GPM6A-221	ENST00000515090	TERF2IP	Q9NYB0	399 aa		11.21	□□□□□ -0.61
GPM6A-221	ENST00000515090	ERBB3	P21860	1342 aa		11.21	□□□□□ -0.62
GPM6A-221	ENST00000515090	RGPD2	P0DJD1	1756 aa		11.21	□□□□□ -0.62
GPM6A-221	ENST00000515090	LTV1	Q96GA3	475 aa	Predicted RBP	11.2	□□□□□ -0.62
GPM6A-221	ENST00000515090	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.2	□□□□□ -0.62
GPM6A-221	ENST00000515090	NLRP2	Q9NX02	1062 aa		11.2	□□□□□ -0.62
GPM6A-221	ENST00000515090	FYB1	O15117	783 aa		11.19	□□□□□ -0.62
GPM6A-221	ENST00000515090	DPY19L2	Q6NUT2	758 aa		11.19	□□□□□ -0.62
GPM6A-221	ENST00000515090	CARD14	Q9BXL6	1004 aa		11.19	□□□□□ -0.62
GPM6A-221	ENST00000515090	GGNBP2	Q9H3C7	697 aa		11.19	□□□□□ -0.62
GPM6A-221	ENST00000515090	BOLA1	Q9Y3E2	137 aa		11.19	□□□□□ -0.62
GPM6A-221	ENST00000515090	OVOS2	A0A0G2JMS6	1433 aa		11.19	□□□□□ -0.62
GPM6A-221	ENST00000515090	MAP3K19	Q56UN5	1328 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms