RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 PCDHGA11Q9Y5H2 935 aa8.12□□□□□ -1.11
CALCOCO2-222ENST00000514006 H3BRB1 525 aa8.11□□□□□ -1.11
CALCOCO2-222ENST00000514006 IGSF3O75054 1194 aa8.11□□□□□ -1.11
CALCOCO2-222ENST00000514006 CCDC125Q86Z20 511 aa8.11□□□□□ -1.11
CALCOCO2-222ENST00000514006 TUT1Q9H6E5 874 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-222ENST00000514006 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-222ENST00000514006 ESPNB1AK53 854 aa8.1□□□□□ -1.11
CALCOCO2-222ENST00000514006 ZNF211Q13398 564 aaPredicted RBP8.1□□□□□ -1.11
CALCOCO2-222ENST00000514006 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
CALCOCO2-222ENST00000514006 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
CALCOCO2-222ENST00000514006 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
CALCOCO2-222ENST00000514006 MRRFQ96E11 262 aaKnown RBP8.1□□□□□ -1.11
CALCOCO2-222ENST00000514006 ANKRD33BA6NCL7 494 aa8.09□□□□□ -1.11
CALCOCO2-222ENST00000514006 ICMTO60725 284 aa8.09□□□□□ -1.11
CALCOCO2-222ENST00000514006 ZNF16P17020 682 aaPredicted RBP8.09□□□□□ -1.11
CALCOCO2-222ENST00000514006 GLYCTKQ8IVS8 523 aa8.09□□□□□ -1.11
CALCOCO2-222ENST00000514006 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-222ENST00000514006 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
CALCOCO2-222ENST00000514006 IL21Q9HBE4 155 aa8.09□□□□□ -1.11
CALCOCO2-222ENST00000514006 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-222ENST00000514006 GIPC2Q8TF65 315 aa8.08□□□□□ -1.12
CALCOCO2-222ENST00000514006 ANO2Q9NQ90 1003 aa8.08□□□□□ -1.12
CALCOCO2-222ENST00000514006 FCF1Q9Y324 198 aaKnown RBP8.08□□□□□ -1.12
CALCOCO2-222ENST00000514006 M0R2N6 131 aa8.07□□□□□ -1.12
CALCOCO2-222ENST00000514006 LGR5O75473 907 aa8.07□□□□□ -1.12
CALCOCO2-222ENST00000514006 NPAS4Q8IUM7 802 aa8.07□□□□□ -1.12
CALCOCO2-222ENST00000514006 TRMT44Q8IYL2 757 aaKnown RBP8.07□□□□□ -1.12
CALCOCO2-222ENST00000514006 ZNF516Q92618 1163 aa8.07□□□□□ -1.12
CALCOCO2-222ENST00000514006 KIAA1522Q9P206 1035 aaPredicted RBP8.07□□□□□ -1.12
CALCOCO2-222ENST00000514006 C21orf2O43822 256 aa8.06□□□□□ -1.12
CALCOCO2-222ENST00000514006 S1PR4O95977 384 aa8.06□□□□□ -1.12
CALCOCO2-222ENST00000514006 TJAP1Q5JTD0 557 aa8.06□□□□□ -1.12
CALCOCO2-222ENST00000514006 TSEN2Q8NCE0 465 aaKnown RBP8.06□□□□□ -1.12
CALCOCO2-222ENST00000514006 GTF3C2Q8WUA4 911 aaPredicted RBP8.06□□□□□ -1.12
CALCOCO2-222ENST00000514006 MKNK1Q9BUB5 465 aa8.06□□□□□ -1.12
CALCOCO2-222ENST00000514006 PTCD1O75127 700 aaKnown RBP8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 MAPK1P28482 360 aa8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 WEE1P30291 646 aa8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 RAB15P59190 212 aa8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 SF3B2Q13435 895 aaKnown RBP8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 ZNF326Q5BKZ1 582 aaKnown RBP8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 IGSF5Q9NSI5 407 aa8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 SEPT3Q9UH03 358 aa8.05□□□□□ -1.12
CALCOCO2-222ENST00000514006 SH3BP2P78314 561 aa8.04□□□□□ -1.12
CALCOCO2-222ENST00000514006 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
CALCOCO2-222ENST00000514006 FKBP5Q13451 457 aaPredicted RBP8.04□□□□□ -1.12
CALCOCO2-222ENST00000514006 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
CALCOCO2-222ENST00000514006 KCTD15Q96SI1 283 aaPredicted RBP8.04□□□□□ -1.12
CALCOCO2-222ENST00000514006 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
CALCOCO2-222ENST00000514006 DNMT3AQ9Y6K1 912 aaPredicted RBP8.04□□□□□ -1.12
CALCOCO2-222ENST00000514006 DCTN4Q9UJW0 460 aa8.03□□□□□ -1.12
CALCOCO2-222ENST00000514006 PTPN5P54829 565 aa8.02□□□□□ -1.13
CALCOCO2-222ENST00000514006 ZSCAN29Q8IWY8 852 aaPredicted RBP8.02□□□□□ -1.13
CALCOCO2-222ENST00000514006 NKX2-3Q8TAU0 364 aa8.02□□□□□ -1.13
CALCOCO2-222ENST00000514006 ASB16Q96NS5 453 aa8.02□□□□□ -1.13
CALCOCO2-222ENST00000514006 ZNF358Q9NW07 568 aa8.02□□□□□ -1.13
CALCOCO2-222ENST00000514006 SHROOM4Q9ULL8 1493 aa8.01□□□□□ -1.13
CALCOCO2-222ENST00000514006 LOC105371045A0A1W2PR82 267 aa8.01□□□□□ -1.13
CALCOCO2-222ENST00000514006 ZBTB24O43167 697 aaPredicted RBP8.01□□□□□ -1.13
CALCOCO2-222ENST00000514006 MTMR3Q13615 1198 aa8.01□□□□□ -1.13
CALCOCO2-222ENST00000514006 COL26A1Q96A83 441 aa8.01□□□□□ -1.13
CALCOCO2-222ENST00000514006 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 FOXO3O43524 673 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 IGFBP4P22692 258 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 SCTRP47872 440 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 ECM1Q16610 540 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
CALCOCO2-222ENST00000514006 CAPN12Q6ZSI9 719 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 VASH1Q7L8A9 365 aaPredicted RBP8□□□□□ -1.13
CALCOCO2-222ENST00000514006 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
CALCOCO2-222ENST00000514006 USP35Q9P2H5 1018 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 MAP4K5Q9Y4K4 846 aa8□□□□□ -1.13
CALCOCO2-222ENST00000514006 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 BACH1O14867 736 aa7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 VARSP26640 1264 aaKnown RBP7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 NAA30Q147X3 362 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 FBXO33Q7Z6M2 555 aa7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 HELQQ8TDG4 1101 aa7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 TRIM52Q96A61 297 aa7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 BCL11AQ9H165 835 aa7.99□□□□□ -1.13
CALCOCO2-222ENST00000514006 TCF3P15923 654 aa7.98□□□□□ -1.13
CALCOCO2-222ENST00000514006 ERVK-9P63128 1117 aa7.98□□□□□ -1.13
CALCOCO2-222ENST00000514006 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
CALCOCO2-222ENST00000514006 FAM13AO94988 1023 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 GDF10P55107 478 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 TRIM32Q13049 653 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 COL19A1Q14993 1142 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 GAS2L2Q8NHY3 880 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 SCG3Q8WXD2 468 aaKnown RBP7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 VTI1AQ96AJ9 217 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
CALCOCO2-222ENST00000514006 WASLO00401 505 aaPredicted RBP7.96□□□□□ -1.14
CALCOCO2-222ENST00000514006 PPEF1O14829 653 aaPredicted RBP7.96□□□□□ -1.14
CALCOCO2-222ENST00000514006 VAMP1P23763 118 aa7.96□□□□□ -1.14
CALCOCO2-222ENST00000514006 SCNN1DP51172 638 aa7.96□□□□□ -1.14
CALCOCO2-222ENST00000514006 WNT7BP56706 349 aa7.96□□□□□ -1.14
CALCOCO2-222ENST00000514006 RGL4Q8IZJ4 473 aa7.96□□□□□ -1.14
CALCOCO2-222ENST00000514006 TNS4Q8IZW8 715 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms