RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 A0A0G2JS52 829 aa11.18□□□□□ -0.62
NEDD4-210ENST00000513957 MYT1Q01538 1121 aa11.18□□□□□ -0.62
NEDD4-210ENST00000513957 ANKRD24Q8TF21 1146 aa11.18□□□□□ -0.62
NEDD4-210ENST00000513957 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
NEDD4-210ENST00000513957 RGPD4Q7Z3J3 1758 aa11.18□□□□□ -0.62
NEDD4-210ENST00000513957 TNS1Q9HBL0 1735 aaKnown RBP11.18□□□□□ -0.62
NEDD4-210ENST00000513957 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
NEDD4-210ENST00000513957 RRS1Q15050 365 aaKnown RBP11.17□□□□□ -0.62
NEDD4-210ENST00000513957 USP35Q9P2H5 1018 aa11.17□□□□□ -0.62
NEDD4-210ENST00000513957 BCL9O00512 1426 aa11.17□□□□□ -0.62
NEDD4-210ENST00000513957 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
NEDD4-210ENST00000513957 UPF1Q92900 1129 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEDD4-210ENST00000513957 OVOS2A0A0G2JMS6 1433 aa11.16□□□□□ -0.62
NEDD4-210ENST00000513957 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.62
NEDD4-210ENST00000513957 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
NEDD4-210ENST00000513957 PDE3BQ13370 1112 aa11.15□□□□□ -0.62
NEDD4-210ENST00000513957 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
NEDD4-210ENST00000513957 IL2RBP14784 551 aa11.14□□□□□ -0.63
NEDD4-210ENST00000513957 NBR1Q14596 966 aa11.14□□□□□ -0.63
NEDD4-210ENST00000513957 DDB1Q16531 1140 aa11.14□□□□□ -0.63
NEDD4-210ENST00000513957 FAM196AQ6ZSG2 479 aa11.14□□□□□ -0.63
NEDD4-210ENST00000513957 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
NEDD4-210ENST00000513957 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
NEDD4-210ENST00000513957 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
NEDD4-210ENST00000513957 EMILIN1Q9Y6C2 1016 aa11.13□□□□□ -0.63
NEDD4-210ENST00000513957 NHSQ6T4R5 1651 aa11.13□□□□□ -0.63
NEDD4-210ENST00000513957 FBLN1P23142 703 aa11.12□□□□□ -0.63
NEDD4-210ENST00000513957 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
NEDD4-210ENST00000513957 EXOC5O00471 708 aa11.11□□□□□ -0.63
NEDD4-210ENST00000513957 SF3B2Q13435 895 aaKnown RBP11.11□□□□□ -0.63
NEDD4-210ENST00000513957 HOMEZQ8IX15 550 aa11.11□□□□□ -0.63
NEDD4-210ENST00000513957 MEGF6O75095 1541 aa11.1□□□□□ -0.63
NEDD4-210ENST00000513957 PPM1GO15355 546 aaPredicted RBP11.1□□□□□ -0.63
NEDD4-210ENST00000513957 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
NEDD4-210ENST00000513957 PARD3Q8TEW0 1356 aa11.1□□□□□ -0.63
NEDD4-210ENST00000513957 RREB1Q92766 1687 aa11.1□□□□□ -0.63
NEDD4-210ENST00000513957 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
NEDD4-210ENST00000513957 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
NEDD4-210ENST00000513957 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
NEDD4-210ENST00000513957 TNNT2P45379 298 aaPredicted RBP11.08□□□□□ -0.64
NEDD4-210ENST00000513957 CC2D1BQ5T0F9 858 aaKnown RBP11.08□□□□□ -0.64
NEDD4-210ENST00000513957 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
NEDD4-210ENST00000513957 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
NEDD4-210ENST00000513957 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
NEDD4-210ENST00000513957 KDRP35968 1356 aa11.07□□□□□ -0.64
NEDD4-210ENST00000513957 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
NEDD4-210ENST00000513957 BAG6P46379 1132 aa11.07□□□□□ -0.64
NEDD4-210ENST00000513957 EIF4A2Q14240 407 aaKnown RBP11.07□□□□□ -0.64
NEDD4-210ENST00000513957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.643e-6■■□□□ 13.5
NEDD4-210ENST00000513957 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
NEDD4-210ENST00000513957 BTAF1O14981 1849 aa11.07□□□□□ -0.64
NEDD4-210ENST00000513957 PCDH11XQ9BZA7 1347 aa11.07□□□□□ -0.64
NEDD4-210ENST00000513957 PCDH11YQ9BZA8 1340 aa11.07□□□□□ -0.64
NEDD4-210ENST00000513957 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
NEDD4-210ENST00000513957 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
NEDD4-210ENST00000513957 MTHFSP49914 203 aa11.05□□□□□ -0.64
NEDD4-210ENST00000513957 MARCH10Q8NA82 808 aaPredicted RBP11.05□□□□□ -0.64
NEDD4-210ENST00000513957 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
NEDD4-210ENST00000513957 EYA1Q99502 592 aa11.05□□□□□ -0.64
NEDD4-210ENST00000513957 TSHZ2Q9NRE2 1034 aa11.05□□□□□ -0.64
NEDD4-210ENST00000513957 ITGB4P16144 1822 aa11.05□□□□□ -0.64
NEDD4-210ENST00000513957 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
NEDD4-210ENST00000513957 NUP188Q5SRE5 1749 aa11.04□□□□□ -0.64
NEDD4-210ENST00000513957 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
NEDD4-210ENST00000513957 LY75O60449 1722 aa11.04□□□□□ -0.64
NEDD4-210ENST00000513957 TRIM37O94972 964 aa11.03□□□□□ -0.64
NEDD4-210ENST00000513957 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
NEDD4-210ENST00000513957 CFAP53Q96M91 514 aa11.03□□□□□ -0.64
NEDD4-210ENST00000513957 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
NEDD4-210ENST00000513957 TOGARAM1Q9Y4F4 1720 aa11.03□□□□□ -0.64
NEDD4-210ENST00000513957 PLSCR1O15162 318 aa11.02□□□□□ -0.65
NEDD4-210ENST00000513957 DIAPH1O60610 1272 aaKnown RBP11.02□□□□□ -0.65
NEDD4-210ENST00000513957 IL13P35225 146 aa11.02□□□□□ -0.65
NEDD4-210ENST00000513957 RALBP1Q15311 655 aa11.02□□□□□ -0.65
NEDD4-210ENST00000513957 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
NEDD4-210ENST00000513957 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
NEDD4-210ENST00000513957 SCN11AQ9UI33 1791 aa11.02□□□□□ -0.65
NEDD4-210ENST00000513957 DSG3P32926 999 aa11.01□□□□□ -0.65
NEDD4-210ENST00000513957 APBA3O96018 575 aa11□□□□□ -0.65
NEDD4-210ENST00000513957 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
NEDD4-210ENST00000513957 HMGB2P26583 209 aaKnown RBP11□□□□□ -0.65
NEDD4-210ENST00000513957 PPP2R1AP30153 589 aa11□□□□□ -0.65
NEDD4-210ENST00000513957 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
NEDD4-210ENST00000513957 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
NEDD4-210ENST00000513957 DDX54Q8TDD1 881 aaKnown RBP11□□□□□ -0.65
NEDD4-210ENST00000513957 ADAMTS7Q9UKP4 1686 aa11□□□□□ -0.65
NEDD4-210ENST00000513957 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
NEDD4-210ENST00000513957 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
NEDD4-210ENST00000513957 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
NEDD4-210ENST00000513957 IFNL2Q8IZJ0 200 aa10.99□□□□□ -0.65
NEDD4-210ENST00000513957 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
NEDD4-210ENST00000513957 NUDCQ9Y266 331 aa10.99□□□□□ -0.65
NEDD4-210ENST00000513957 ZNF831Q5JPB2 1677 aa10.98□□□□□ -0.65
NEDD4-210ENST00000513957 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
NEDD4-210ENST00000513957 SULT6B1Q6IMI4 303 aa10.98□□□□□ -0.65
NEDD4-210ENST00000513957 DEFB132Q7Z7B7 95 aa10.98□□□□□ -0.65
NEDD4-210ENST00000513957 CAMKK2Q96RR4 588 aa10.98□□□□□ -0.65
NEDD4-210ENST00000513957 CYP27B1O15528 508 aa10.97□□□□□ -0.65
NEDD4-210ENST00000513957 EN1Q05925 392 aaPredicted RBP10.97□□□□□ -0.65
NEDD4-210ENST00000513957 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms