RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 OSBPL3Q9H4L5 887 aa7.15□□□□□ -1.26
PROM1-216ENST00000513946 CDCA7Q9BWT1 371 aaPredicted RBP7.14□□□□□ -1.27
PROM1-216ENST00000513946 POLMQ9NP87 494 aaPredicted RBP7.14□□□□□ -1.27
PROM1-216ENST00000513946 ZNF330Q9Y3S2 320 aaPredicted RBP7.14□□□□□ -1.27
PROM1-216ENST00000513946 A0A1W2PRU2 124 aa7.13□□□□□ -1.27
PROM1-216ENST00000513946 ATP5J2-PTCD1G3V325 749 aa7.13□□□□□ -1.27
PROM1-216ENST00000513946 KRT76Q01546 638 aa7.13□□□□□ -1.27
PROM1-216ENST00000513946 GDPD2Q9HCC8 539 aa7.13□□□□□ -1.27
PROM1-216ENST00000513946 CHIC2Q9UKJ5 165 aa7.13□□□□□ -1.27
PROM1-216ENST00000513946 ZSCAN1Q8NBB4 408 aa7.12□□□□□ -1.27
PROM1-216ENST00000513946 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
PROM1-216ENST00000513946 GRIP2Q9C0E4 1043 aa7.12□□□□□ -1.27
PROM1-216ENST00000513946 PCDHB11Q9Y5F2 797 aa7.12□□□□□ -1.27
PROM1-216ENST00000513946 GPC1P35052 558 aa7.11□□□□□ -1.27
PROM1-216ENST00000513946 LYSMD3Q7Z3D4 306 aa7.11□□□□□ -1.27
PROM1-216ENST00000513946 TRIM52Q96A61 297 aa7.11□□□□□ -1.27
PROM1-216ENST00000513946 ITGA6P23229 1130 aa7.1□□□□□ -1.27
PROM1-216ENST00000513946 VAC14Q08AM6 782 aa7.1□□□□□ -1.27
PROM1-216ENST00000513946 MCM6Q14566 821 aa7.1□□□□□ -1.27
PROM1-216ENST00000513946 PRICKLE2Q7Z3G6 844 aa7.1□□□□□ -1.27
PROM1-216ENST00000513946 PRM3Q9NNZ6 103 aa7.1□□□□□ -1.27
PROM1-216ENST00000513946 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
PROM1-216ENST00000513946 EIF4G2P78344 907 aaKnown RBP eCLIP7.09□□□□□ -1.27
PROM1-216ENST00000513946 CLN3Q13286 438 aa7.09□□□□□ -1.27
PROM1-216ENST00000513946 VWA5B2Q8N398 1253 aa7.09□□□□□ -1.27
PROM1-216ENST00000513946 CUEDC1Q9NWM3 386 aaPredicted RBP7.09□□□□□ -1.27
PROM1-216ENST00000513946 COG6Q9Y2V7 657 aa7.08□□□□□ -1.28
PROM1-216ENST00000513946 MEN1O00255 615 aa7.07□□□□□ -1.28
PROM1-216ENST00000513946 RHOQP17081 205 aa7.07□□□□□ -1.28
PROM1-216ENST00000513946 ABL2P42684 1182 aa7.07□□□□□ -1.28
PROM1-216ENST00000513946 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
PROM1-216ENST00000513946 CYP2U1Q7Z449 544 aa7.07□□□□□ -1.28
PROM1-216ENST00000513946 XAGE2Q96GT9 111 aa7.07□□□□□ -1.28
PROM1-216ENST00000513946 COL25A1Q9BXS0 654 aaPredicted RBP7.07□□□□□ -1.28
PROM1-216ENST00000513946 SPATA31C2B4DYI2 1134 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 GNRH1P01148 92 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 IL2RAP01589 272 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 POU4F2Q12837 409 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 WASHC4Q2M389 1173 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 CNTNAP3BQ96NU0 1288 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 CNTNAP3Q9BZ76 1288 aa7.06□□□□□ -1.28
PROM1-216ENST00000513946 CENPCQ03188 943 aa7.05□□□□□ -1.28
PROM1-216ENST00000513946 ESYT1Q9BSJ8 1104 aa7.05□□□□□ -1.28
PROM1-216ENST00000513946 ARHGEF10LQ9HCE6 1279 aa7.05□□□□□ -1.28
PROM1-216ENST00000513946 DBN1Q16643 649 aa7.04□□□□□ -1.28
PROM1-216ENST00000513946 WDR44Q5JSH3 913 aa7.04□□□□□ -1.28
PROM1-216ENST00000513946 CNKSR1Q969H4 720 aa7.04□□□□□ -1.28
PROM1-216ENST00000513946 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
PROM1-216ENST00000513946 FHDC1Q9C0D6 1143 aaPredicted RBP7.04□□□□□ -1.28
PROM1-216ENST00000513946 RAB6BQ9NRW1 208 aa7.04□□□□□ -1.28
PROM1-216ENST00000513946 STAU1O95793 577 aaKnown RBP7.03□□□□□ -1.28
PROM1-216ENST00000513946 USP4Q13107 963 aa7.03□□□□□ -1.28
PROM1-216ENST00000513946 SLFNL1Q499Z3 407 aa7.03□□□□□ -1.28
PROM1-216ENST00000513946 NBPF10Q6P3W6 841 aaKnown RBP7.03□□□□□ -1.28
PROM1-216ENST00000513946 NBPF15Q8N660 670 aa7.03□□□□□ -1.28
PROM1-216ENST00000513946 NLRP3Q96P20 1036 aa7.03□□□□□ -1.28
PROM1-216ENST00000513946 ALG2Q9H553 416 aa7.03□□□□□ -1.28
PROM1-216ENST00000513946 DYRK1BQ9Y463 629 aa7.03□□□□□ -1.28
PROM1-216ENST00000513946 CDC14CA4D256 554 aa7.02□□□□□ -1.29
PROM1-216ENST00000513946 SLURP2P0DP57 97 aa7.02□□□□□ -1.29
PROM1-216ENST00000513946 SLC27A3Q5K4L6 730 aa7.02□□□□□ -1.29
PROM1-216ENST00000513946 RNF135Q8IUD6 432 aa7.02□□□□□ -1.29
PROM1-216ENST00000513946 FAM181BA6NEQ2 426 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 MYCP01106 439 aaPredicted RBP7.01□□□□□ -1.29
PROM1-216ENST00000513946 THBS1P07996 1170 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 SOX11P35716 441 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 GAS6Q14393 721 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 TRIM22Q8IYM9 498 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 WHAMMQ8TF30 809 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 ZNF837Q96EG3 531 aaPredicted RBP7.01□□□□□ -1.29
PROM1-216ENST00000513946 GMCL1Q96IK5 515 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 ETNK1Q9HBU6 452 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 DOLKQ9UPQ8 538 aa7.01□□□□□ -1.29
PROM1-216ENST00000513946 PIK3CDO00329 1044 aa7□□□□□ -1.29
PROM1-216ENST00000513946 SEMA3FQ13275 785 aa7□□□□□ -1.29
PROM1-216ENST00000513946 MAP7D1Q3KQU3 841 aa7□□□□□ -1.29
PROM1-216ENST00000513946 ZNF385CQ66K41 422 aaPredicted RBP7□□□□□ -1.29
PROM1-216ENST00000513946 PLPP7Q8NBV4 271 aa7□□□□□ -1.29
PROM1-216ENST00000513946 SCNN1DP51172 638 aa6.99□□□□□ -1.29
PROM1-216ENST00000513946 OXLD1Q5BKU9 147 aa6.99□□□□□ -1.29
PROM1-216ENST00000513946 ESF1Q9H501 851 aaKnown RBP6.99□□□□□ -1.29
PROM1-216ENST00000513946 WASLO00401 505 aaPredicted RBP6.98□□□□□ -1.29
PROM1-216ENST00000513946 ARHGEF15O94989 841 aa6.98□□□□□ -1.29
PROM1-216ENST00000513946 GSK3AP49840 483 aa6.98□□□□□ -1.29
PROM1-216ENST00000513946 TMEM132AQ24JP5 1023 aa6.98□□□□□ -1.29
PROM1-216ENST00000513946 TAS1R3Q7RTX0 852 aa6.98□□□□□ -1.29
PROM1-216ENST00000513946 ZSCAN10Q96SZ4 725 aaPredicted RBP6.98□□□□□ -1.29
PROM1-216ENST00000513946 PCDHGA11Q9Y5H2 935 aa6.98□□□□□ -1.29
PROM1-216ENST00000513946 F11P03951 625 aa6.97□□□□□ -1.29
PROM1-216ENST00000513946 FLIIQ13045 1269 aa6.97□□□□□ -1.29
PROM1-216ENST00000513946 UBAP2LQ14157 1087 aaKnown RBP6.97□□□□□ -1.29
PROM1-216ENST00000513946 C4orf17Q53FE4 359 aa6.97□□□□□ -1.29
PROM1-216ENST00000513946 PPARGC1BQ86YN6 1023 aaKnown RBP6.97□□□□□ -1.29
PROM1-216ENST00000513946 ADAMTS19Q8TE59 1207 aa6.97□□□□□ -1.29
PROM1-216ENST00000513946 SIRT1Q96EB6 747 aa6.97□□□□□ -1.29
PROM1-216ENST00000513946 GAS2L1Q99501 681 aaPredicted RBP6.97□□□□□ -1.29
PROM1-216ENST00000513946 TIMMDC1Q9NPL8 285 aa6.97□□□□□ -1.29
PROM1-216ENST00000513946 TMEM229AB2RXF0 380 aa6.96□□□□□ -1.3
PROM1-216ENST00000513946 GPR25O00155 361 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms