RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 THRAP3Q9Y2W1 955 aaKnown RBP15.16■□□□□ 0.02
HTT-213ENST00000513806 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
HTT-213ENST00000513806 ONECUT3O60422 494 aaPredicted RBP15.15■□□□□ 0.02
HTT-213ENST00000513806 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
HTT-213ENST00000513806 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
HTT-213ENST00000513806 RSPH6AQ9H0K4 717 aa15.15■□□□□ 0.02
HTT-213ENST00000513806 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
HTT-213ENST00000513806 OVOS2A0A0G2JMS6 1433 aa15.15■□□□□ 0.02
HTT-213ENST00000513806 KDRP35968 1356 aa15.14■□□□□ 0.01
HTT-213ENST00000513806 CCDC146Q8IYE0 955 aa15.14■□□□□ 0.01
HTT-213ENST00000513806 PRKAR2BP31323 418 aa15.13■□□□□ 0.01
HTT-213ENST00000513806 DDB1Q16531 1140 aa15.13■□□□□ 0.01
HTT-213ENST00000513806 TNS2Q63HR2 1409 aa15.13■□□□□ 0.01
HTT-213ENST00000513806 PHACTR3Q96KR7 559 aa15.13■□□□□ 0.01
HTT-213ENST00000513806 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
HTT-213ENST00000513806 SBF2Q86WG5 1849 aa15.13■□□□□ 0.01
HTT-213ENST00000513806 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
HTT-213ENST00000513806 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
HTT-213ENST00000513806 EXOC5O00471 708 aa15.11■□□□□ 0.01
HTT-213ENST00000513806 FAM9BQ8IZU0 186 aa15.11■□□□□ 0.01
HTT-213ENST00000513806 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
HTT-213ENST00000513806 ZCRB1Q8TBF4 217 aaKnown RBP15.11■□□□□ 0.01
HTT-213ENST00000513806 PNISRQ8TF01 805 aaKnown RBP15.11■□□□□ 0.01
HTT-213ENST00000513806 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
HTT-213ENST00000513806 TOGARAM1Q9Y4F4 1720 aa15.11■□□□□ 0.01
HTT-213ENST00000513806 KRT27Q7Z3Y8 459 aa15.1■□□□□ 0.01
HTT-213ENST00000513806 EP400Q96L91 3159 aa15.09■□□□□ 0.01
HTT-213ENST00000513806 CYP27B1O15528 508 aa15.09■□□□□ 0.01
HTT-213ENST00000513806 PDE3BQ13370 1112 aa15.09■□□□□ 0.01
HTT-213ENST00000513806 MTHFSDQ2M296 383 aaKnown RBP15.09■□□□□ 0.01
HTT-213ENST00000513806 CDCA7Q9BWT1 371 aaPredicted RBP15.09■□□□□ 0.01
HTT-213ENST00000513806 ITGB4P16144 1822 aa15.08■□□□□ 0.01
HTT-213ENST00000513806 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0
HTT-213ENST00000513806 PLEKHF1Q96S99 279 aa15.08■□□□□ 0
HTT-213ENST00000513806 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
HTT-213ENST00000513806 CCER2I3L3R5 266 aa15.07■□□□□ 0
HTT-213ENST00000513806 FCHSD2O94868 740 aa15.07■□□□□ 0
HTT-213ENST00000513806 PLEKHO1Q53GL0 409 aaPredicted RBP15.07■□□□□ 0
HTT-213ENST00000513806 ACSBG1Q96GR2 724 aa15.07■□□□□ 0
HTT-213ENST00000513806 PTF1AQ7RTS3 328 aa15.06■□□□□ 0
HTT-213ENST00000513806 SPG7Q9UQ90 795 aa15.06■□□□□ 0
HTT-213ENST00000513806 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
HTT-213ENST00000513806 PHKG2P15735 406 aa15.05■□□□□ -0
HTT-213ENST00000513806 PCDH11XQ9BZA7 1347 aa15.05■□□□□ -0
HTT-213ENST00000513806 PCDH11YQ9BZA8 1340 aa15.05■□□□□ -0
HTT-213ENST00000513806 KDM6AO15550 1401 aaPredicted RBP15.03■□□□□ -0
HTT-213ENST00000513806 NEUROD2Q15784 382 aa15.03■□□□□ -0
HTT-213ENST00000513806 AMOTQ4VCS5 1084 aa15.03■□□□□ -0
HTT-213ENST00000513806 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
HTT-213ENST00000513806 BTAF1O14981 1849 aa15.03■□□□□ -0
HTT-213ENST00000513806 MAPK8IP3Q9UPT6 1336 aa15.02■□□□□ -0
HTT-213ENST00000513806 KCNQ2O43526 872 aa15.02■□□□□ -0
HTT-213ENST00000513806 DCTN1Q14203 1278 aa15.02■□□□□ -0
HTT-213ENST00000513806 IFNL2Q8IZJ0 200 aa15.02■□□□□ -0
HTT-213ENST00000513806 RUNDC1Q96C34 613 aa15.02■□□□□ -0
HTT-213ENST00000513806 LGR6Q9HBX8 967 aa15.02■□□□□ -0
HTT-213ENST00000513806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.02■□□□□ -0
HTT-213ENST00000513806 TNS1Q9HBL0 1735 aaKnown RBP15.02□□□□□ -0.01
HTT-213ENST00000513806 NHSQ6T4R5 1651 aa15.02□□□□□ -0.01
HTT-213ENST00000513806 APAF1O14727 1248 aa15.01□□□□□ -0.01
HTT-213ENST00000513806 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
HTT-213ENST00000513806 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
HTT-213ENST00000513806 ADAMTS7Q9UKP4 1686 aa15□□□□□ -0.01
HTT-213ENST00000513806 TRIM37O94972 964 aa15□□□□□ -0.01
HTT-213ENST00000513806 NFE2L2Q16236 605 aa15□□□□□ -0.01
HTT-213ENST00000513806 AKAP4Q5JQC9 854 aa15□□□□□ -0.01
HTT-213ENST00000513806 GAS2L2Q8NHY3 880 aa15□□□□□ -0.01
HTT-213ENST00000513806 SYTL4Q96C24 671 aaPredicted RBP15□□□□□ -0.01
HTT-213ENST00000513806 THUMPD2Q9BTF0 503 aaKnown RBP15□□□□□ -0.01
HTT-213ENST00000513806 SIPA1L3O60292 1781 aaPredicted RBP15□□□□□ -0.01
HTT-213ENST00000513806 MAP3K5Q99683 1374 aa14.99□□□□□ -0.01
HTT-213ENST00000513806 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
HTT-213ENST00000513806 MCM10Q7L590 875 aa14.99□□□□□ -0.01
HTT-213ENST00000513806 NEFMP07197 916 aa14.98□□□□□ -0.01
HTT-213ENST00000513806 PRIM1P49642 420 aaKnown RBP14.98□□□□□ -0.01
HTT-213ENST00000513806 RIPK4P57078 832 aa14.98□□□□□ -0.01
HTT-213ENST00000513806 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
HTT-213ENST00000513806 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
HTT-213ENST00000513806 GNAT3A8MTJ3 354 aa14.97□□□□□ -0.01
HTT-213ENST00000513806 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
HTT-213ENST00000513806 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
HTT-213ENST00000513806 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
HTT-213ENST00000513806 PLEKHG2Q9H7P9 1386 aa14.97□□□□□ -0.01
HTT-213ENST00000513806 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
HTT-213ENST00000513806 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
HTT-213ENST00000513806 BCL9O00512 1426 aa14.93□□□□□ -0.02
HTT-213ENST00000513806 HSP90AB1P08238 724 aaKnown RBP14.93□□□□□ -0.02
HTT-213ENST00000513806 CABP4P57796 275 aa14.93□□□□□ -0.02
HTT-213ENST00000513806 NFATC2IPQ8NCF5 419 aa14.93□□□□□ -0.02
HTT-213ENST00000513806 PIGBQ92521 554 aa14.93□□□□□ -0.02
HTT-213ENST00000513806 RTF1Q92541 710 aaKnown RBP14.93□□□□□ -0.02
HTT-213ENST00000513806 UPF1Q92900 1129 aaKnown RBP eCLIP14.93□□□□□ -0.02
HTT-213ENST00000513806 MRC1P22897 1456 aa14.93□□□□□ -0.02
HTT-213ENST00000513806 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
HTT-213ENST00000513806 DEFB132Q7Z7B7 95 aa14.92□□□□□ -0.02
HTT-213ENST00000513806 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
HTT-213ENST00000513806 KDM3BQ7LBC6 1761 aa14.91□□□□□ -0.02
HTT-213ENST00000513806 CEMIPQ8WUJ3 1361 aa14.91□□□□□ -0.02
HTT-213ENST00000513806 SLC39A6Q13433 755 aa14.91□□□□□ -0.02
HTT-213ENST00000513806 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms