RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
TRAPPC11-210ENST00000513600 SIRT1Q96EB6 747 aa12.42□□□□□ -0.42
TRAPPC11-210ENST00000513600 ZNF395Q9H8N7 513 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC11-210ENST00000513600 ADAMTS19Q8TE59 1207 aa12.41□□□□□ -0.42
TRAPPC11-210ENST00000513600 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
TRAPPC11-210ENST00000513600 TTLL8A6PVC2 850 aa12.4□□□□□ -0.42
TRAPPC11-210ENST00000513600 TRAK2O60296 914 aa12.4□□□□□ -0.42
TRAPPC11-210ENST00000513600 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
TRAPPC11-210ENST00000513600 MAN1A2O60476 641 aa12.39□□□□□ -0.43
TRAPPC11-210ENST00000513600 SKIP12755 728 aa12.38□□□□□ -0.43
TRAPPC11-210ENST00000513600 OXLD1Q5BKU9 147 aa12.38□□□□□ -0.43
TRAPPC11-210ENST00000513600 GLMNQ92990 594 aa12.38□□□□□ -0.43
TRAPPC11-210ENST00000513600 INSM2Q96T92 566 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC11-210ENST00000513600 POLMQ9NP87 494 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC11-210ENST00000513600 LZTS3O60299 673 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC11-210ENST00000513600 GNRH1P01148 92 aa12.36□□□□□ -0.43
TRAPPC11-210ENST00000513600 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC11-210ENST00000513600 A0A1W2PRU2 124 aa12.35□□□□□ -0.43
TRAPPC11-210ENST00000513600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.35□□□□□ -0.43
TRAPPC11-210ENST00000513600 ZNF775Q96BV0 537 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC11-210ENST00000513600 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
TRAPPC11-210ENST00000513600 DNMT3LQ9UJW3 386 aa12.35□□□□□ -0.43
TRAPPC11-210ENST00000513600 SOBPA7XYQ1 873 aa12.33□□□□□ -0.44
TRAPPC11-210ENST00000513600 EML3Q32P44 896 aa12.33□□□□□ -0.44
TRAPPC11-210ENST00000513600 CALR3Q96L12 384 aaKnown RBP12.33□□□□□ -0.44
TRAPPC11-210ENST00000513600 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
TRAPPC11-210ENST00000513600 UCN2Q96RP3 112 aa12.33□□□□□ -0.44
TRAPPC11-210ENST00000513600 FIGNL2A6NMB9 653 aa12.32□□□□□ -0.44
TRAPPC11-210ENST00000513600 MEN1O00255 615 aa12.32□□□□□ -0.44
TRAPPC11-210ENST00000513600 GPC1P35052 558 aa12.32□□□□□ -0.44
TRAPPC11-210ENST00000513600 RNF144AP50876 292 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC11-210ENST00000513600 CLN3Q13286 438 aa12.32□□□□□ -0.44
TRAPPC11-210ENST00000513600 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
TRAPPC11-210ENST00000513600 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
TRAPPC11-210ENST00000513600 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
TRAPPC11-210ENST00000513600 ATP9BO43861 1147 aa12.3□□□□□ -0.44
TRAPPC11-210ENST00000513600 ESCO1Q5FWF5 840 aa12.3□□□□□ -0.44
TRAPPC11-210ENST00000513600 FOXD4L5Q5VV16 416 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-210ENST00000513600 TBC1D9Q6ZT07 1266 aa12.3□□□□□ -0.44
TRAPPC11-210ENST00000513600 ZNF777Q9ULD5 760 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-210ENST00000513600 NOD1Q9Y239 953 aa12.3□□□□□ -0.44
TRAPPC11-210ENST00000513600 NCOA4Q13772 614 aa12.29□□□□□ -0.44
TRAPPC11-210ENST00000513600 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
TRAPPC11-210ENST00000513600 NXF1Q9UBU9 619 aaKnown RBP12.29□□□□□ -0.44
TRAPPC11-210ENST00000513600 NPAS3Q8IXF0 933 aa12.28□□□□□ -0.44
TRAPPC11-210ENST00000513600 ESYT1Q9BSJ8 1104 aa12.28□□□□□ -0.44
TRAPPC11-210ENST00000513600 TERTO14746 1132 aaKnown RBP12.27□□□□□ -0.45
TRAPPC11-210ENST00000513600 CNKSR1Q969H4 720 aa12.27□□□□□ -0.45
TRAPPC11-210ENST00000513600 XAGE2Q96GT9 111 aa12.27□□□□□ -0.45
TRAPPC11-210ENST00000513600 RAB6BQ9NRW1 208 aa12.27□□□□□ -0.45
TRAPPC11-210ENST00000513600 USP17L3A6NCW0 530 aa12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 USP17L4A6NCW7 530 aa12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 IL2RAP01589 272 aa12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 USP17L1Q7RTZ2 530 aa12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 LYSMD3Q7Z3D4 306 aa12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 DEPDC4Q8N2C3 294 aa12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
TRAPPC11-210ENST00000513600 SLC27A3Q5K4L6 730 aa12.25□□□□□ -0.45
TRAPPC11-210ENST00000513600 TRIM50Q86XT4 487 aa12.24□□□□□ -0.45
TRAPPC11-210ENST00000513600 GRIP2Q9C0E4 1043 aa12.24□□□□□ -0.45
TRAPPC11-210ENST00000513600 ETNK1Q9HBU6 452 aa12.24□□□□□ -0.45
TRAPPC11-210ENST00000513600 PCDHGA11Q9Y5H2 935 aa12.24□□□□□ -0.45
TRAPPC11-210ENST00000513600 PTSQ03393 145 aa12.23□□□□□ -0.45
TRAPPC11-210ENST00000513600 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
TRAPPC11-210ENST00000513600 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
TRAPPC11-210ENST00000513600 HRH3Q9Y5N1 445 aa12.23□□□□□ -0.45
TRAPPC11-210ENST00000513600 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC11-210ENST00000513600 SCNN1DP51172 638 aa12.22□□□□□ -0.45
TRAPPC11-210ENST00000513600 GDF10P55107 478 aa12.22□□□□□ -0.45
TRAPPC11-210ENST00000513600 GTF2IP78347 998 aa12.22□□□□□ -0.45
TRAPPC11-210ENST00000513600 CENPCQ03188 943 aa12.22□□□□□ -0.45
TRAPPC11-210ENST00000513600 TREML4Q6UXN2 200 aa12.22□□□□□ -0.45
TRAPPC11-210ENST00000513600 PRICKLE2Q7Z3G6 844 aa12.22□□□□□ -0.45
TRAPPC11-210ENST00000513600 WASLO00401 505 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC11-210ENST00000513600 INHAP05111 366 aa12.21□□□□□ -0.45
TRAPPC11-210ENST00000513600 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.45
TRAPPC11-210ENST00000513600 C14orf37Q86TY3 774 aa12.21□□□□□ -0.45
TRAPPC11-210ENST00000513600 MAFBQ9Y5Q3 323 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC11-210ENST00000513600 H3BM21 787 aa12.2□□□□□ -0.46
TRAPPC11-210ENST00000513600 WFS1O76024 890 aa12.2□□□□□ -0.46
TRAPPC11-210ENST00000513600 ATP1A2P50993 1020 aa12.2□□□□□ -0.46
TRAPPC11-210ENST00000513600 SLC35F4A4IF30 521 aa12.19□□□□□ -0.46
TRAPPC11-210ENST00000513600 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
TRAPPC11-210ENST00000513600 GTF2E1P29083 439 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC11-210ENST00000513600 PSME1Q06323 249 aa12.19□□□□□ -0.46
TRAPPC11-210ENST00000513600 ZSCAN10Q96SZ4 725 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC11-210ENST00000513600 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
TRAPPC11-210ENST00000513600 SPATA31C2B4DYI2 1134 aa12.18□□□□□ -0.46
TRAPPC11-210ENST00000513600 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
TRAPPC11-210ENST00000513600 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
TRAPPC11-210ENST00000513600 VEGFBP49765 207 aa12.17□□□□□ -0.46
TRAPPC11-210ENST00000513600 POU4F2Q12837 409 aa12.17□□□□□ -0.46
TRAPPC11-210ENST00000513600 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
TRAPPC11-210ENST00000513600 ERICH6Q7L0X2 663 aa12.17□□□□□ -0.46
TRAPPC11-210ENST00000513600 FHDC1Q9C0D6 1143 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC11-210ENST00000513600 TMEM229AB2RXF0 380 aa12.16□□□□□ -0.46
TRAPPC11-210ENST00000513600 RHOQP17081 205 aa12.16□□□□□ -0.46
TRAPPC11-210ENST00000513600 TLR1Q15399 786 aa12.16□□□□□ -0.46
TRAPPC11-210ENST00000513600 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms