RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 SOX12O15370 315 aa13.91□□□□□ -0.18
LDB2-214ENST00000512345 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
LDB2-214ENST00000512345 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
LDB2-214ENST00000512345 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
LDB2-214ENST00000512345 COL18A1P39060 1754 aa13.91□□□□□ -0.18
LDB2-214ENST00000512345 R3HDM1Q15032 1099 aaKnown RBP13.9□□□□□ -0.18
LDB2-214ENST00000512345 USP31Q70CQ4 1352 aa13.9□□□□□ -0.18
LDB2-214ENST00000512345 NFAT5O94916 1531 aa13.9□□□□□ -0.19
LDB2-214ENST00000512345 DDB1Q16531 1140 aa13.89□□□□□ -0.19
LDB2-214ENST00000512345 LRP5O75197 1615 aa13.89□□□□□ -0.19
LDB2-214ENST00000512345 OVOS2A0A0J9YW53 1432 aa13.89□□□□□ -0.19
LDB2-214ENST00000512345 OVOS2Q6IE36 1432 aa13.89□□□□□ -0.19
LDB2-214ENST00000512345 CSB-PGBD3P0DP91 1061 aa13.88□□□□□ -0.19
LDB2-214ENST00000512345 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
LDB2-214ENST00000512345 CARD10Q9BWT7 1032 aa13.88□□□□□ -0.19
LDB2-214ENST00000512345 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
LDB2-214ENST00000512345 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
LDB2-214ENST00000512345 LRRC37A3O60309 1634 aa13.86□□□□□ -0.19
LDB2-214ENST00000512345 USP54Q70EL1 1684 aa13.86□□□□□ -0.19
LDB2-214ENST00000512345 MTHFSP49914 203 aa13.86□□□□□ -0.19
LDB2-214ENST00000512345 ABCC6O95255 1503 aa13.85□□□□□ -0.19
LDB2-214ENST00000512345 PEAK1Q9H792 1746 aa13.85□□□□□ -0.19
LDB2-214ENST00000512345 FBLN1P23142 703 aa13.85□□□□□ -0.19
LDB2-214ENST00000512345 PNISRQ8TF01 805 aaKnown RBP13.85□□□□□ -0.19
LDB2-214ENST00000512345 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
LDB2-214ENST00000512345 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
LDB2-214ENST00000512345 MARCH10Q8NA82 808 aaPredicted RBP13.84□□□□□ -0.19
LDB2-214ENST00000512345 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
LDB2-214ENST00000512345 RREB1Q92766 1687 aa13.84□□□□□ -0.19
LDB2-214ENST00000512345 RGPD5Q99666 1765 aa13.83□□□□□ -0.19
LDB2-214ENST00000512345 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.2
LDB2-214ENST00000512345 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
LDB2-214ENST00000512345 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.2
LDB2-214ENST00000512345 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.2
LDB2-214ENST00000512345 BCL9O00512 1426 aa13.82□□□□□ -0.2
LDB2-214ENST00000512345 EXOC5O00471 708 aa13.82□□□□□ -0.2
LDB2-214ENST00000512345 ERBB3P21860 1342 aa13.82□□□□□ -0.2
LDB2-214ENST00000512345 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
LDB2-214ENST00000512345 PLSCR1O15162 318 aa13.81□□□□□ -0.2
LDB2-214ENST00000512345 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
LDB2-214ENST00000512345 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
LDB2-214ENST00000512345 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
LDB2-214ENST00000512345 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
LDB2-214ENST00000512345 EMILIN1Q9Y6C2 1016 aa13.8□□□□□ -0.2
LDB2-214ENST00000512345 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
LDB2-214ENST00000512345 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
LDB2-214ENST00000512345 SBF2Q86WG5 1849 aa13.79□□□□□ -0.2
LDB2-214ENST00000512345 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
LDB2-214ENST00000512345 ANKRD24Q8TF21 1146 aa13.79□□□□□ -0.2
LDB2-214ENST00000512345 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
LDB2-214ENST00000512345 INSRP06213 1382 aa13.79□□□□□ -0.2
LDB2-214ENST00000512345 HAX1O00165 279 aa13.78□□□□□ -0.2
LDB2-214ENST00000512345 WDR43Q15061 677 aaKnown RBP eCLIP13.78□□□□□ -0.2
LDB2-214ENST00000512345 MAP3K19Q56UN5 1328 aa13.78□□□□□ -0.2
LDB2-214ENST00000512345 RGPD3A6NKT7 1758 aaPredicted RBP13.78□□□□□ -0.2
LDB2-214ENST00000512345 RGPD4Q7Z3J3 1758 aa13.78□□□□□ -0.2
LDB2-214ENST00000512345 LTN1O94822 1766 aa13.77□□□□□ -0.21
LDB2-214ENST00000512345 IL2RBP14784 551 aa13.77□□□□□ -0.21
LDB2-214ENST00000512345 IP6K1Q92551 441 aa13.77□□□□□ -0.21
LDB2-214ENST00000512345 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
LDB2-214ENST00000512345 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
LDB2-214ENST00000512345 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
LDB2-214ENST00000512345 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
LDB2-214ENST00000512345 AMPHP49418 695 aa13.75□□□□□ -0.21
LDB2-214ENST00000512345 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
LDB2-214ENST00000512345 ADAMTS8Q9UP79 889 aa13.75□□□□□ -0.21
LDB2-214ENST00000512345 NUDCQ9Y266 331 aa13.75□□□□□ -0.21
LDB2-214ENST00000512345 KCNQ2O43526 872 aa13.74□□□□□ -0.21
LDB2-214ENST00000512345 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
LDB2-214ENST00000512345 FLT4P35916 1363 aa13.73□□□□□ -0.21
LDB2-214ENST00000512345 HOXC9P31274 260 aa13.73□□□□□ -0.21
LDB2-214ENST00000512345 IL13P35225 146 aa13.73□□□□□ -0.21
LDB2-214ENST00000512345 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
LDB2-214ENST00000512345 HSP90AB2PQ58FF8 381 aa13.73□□□□□ -0.21
LDB2-214ENST00000512345 LTV1Q96GA3 475 aaPredicted RBP13.73□□□□□ -0.21
LDB2-214ENST00000512345 ACSBG1Q96GR2 724 aa13.73□□□□□ -0.21
LDB2-214ENST00000512345 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
LDB2-214ENST00000512345 RTL1A6NKG5 1358 aa13.71□□□□□ -0.21
LDB2-214ENST00000512345 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
LDB2-214ENST00000512345 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.21
LDB2-214ENST00000512345 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.21
LDB2-214ENST00000512345 NHSQ6T4R5 1651 aa13.7□□□□□ -0.22
LDB2-214ENST00000512345 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
LDB2-214ENST00000512345 STK32BQ9NY57 414 aa13.7□□□□□ -0.22
LDB2-214ENST00000512345 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
LDB2-214ENST00000512345 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
LDB2-214ENST00000512345 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
LDB2-214ENST00000512345 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
LDB2-214ENST00000512345 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
LDB2-214ENST00000512345 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
LDB2-214ENST00000512345 DDX54Q8TDD1 881 aaKnown RBP13.68□□□□□ -0.22
LDB2-214ENST00000512345 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
LDB2-214ENST00000512345 FCHSD2O94868 740 aa13.67□□□□□ -0.22
LDB2-214ENST00000512345 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
LDB2-214ENST00000512345 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
LDB2-214ENST00000512345 CASZ1Q86V15 1759 aa13.67□□□□□ -0.22
LDB2-214ENST00000512345 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
LDB2-214ENST00000512345 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
LDB2-214ENST00000512345 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
LDB2-214ENST00000512345 HMOX1P09601 288 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms