RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 PRKRIP1Q9H875 184 aaPredicted RBP2.54□□□□□ -2
TRAPPC13-211ENST00000512009 CCDC88AQ3V6T2 1871 aa2.54□□□□□ -2
TRAPPC13-211ENST00000512009 BARGINQ6ZT62 677 aa2.54□□□□□ -2
TRAPPC13-211ENST00000512009 FNDC1Q4ZHG4 1894 aaPredicted RBP2.54□□□□□ -2
TRAPPC13-211ENST00000512009 SPATA31A3Q5VYP0 1347 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 CARD14Q9BXL6 1004 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 NUP155O75694 1391 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 CASP8AP2Q9UKL3 1982 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 CCER2I3L3R5 266 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 C8orf34Q49A92 452 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 RTL1A6NKG5 1358 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 CUBNO60494 3623 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 PLEKHD1A6NEE1 506 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 POTEAQ6S8J7 498 aa2.53□□□□□ -2
TRAPPC13-211ENST00000512009 COL11A1P12107 1806 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-211ENST00000512009 RPAP1Q9BWH6 1393 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 CELSR1Q9NYQ6 3014 aa2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 CACNA1AO00555 2505 aa2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 KDM2AQ9Y2K7 1162 aa2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 SPAG9O60271 1321 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 THEMISQ8N1K5 641 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 LTBP2Q14767 1821 aa2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 MYH1P12882 1939 aa2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 ERBB4Q15303 1308 aa2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 SKAP1Q86WV1 359 aa2.52□□□□□ -2.01
TRAPPC13-211ENST00000512009 LCTP09848 1927 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 MGAQ8IWI9 3026 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 FSD2A1L4K1 749 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 FOXD1Q16676 465 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 BRINP3Q76B58 766 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 DMXL2Q8TDJ6 3036 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 DIEXFQ68CQ4 756 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 ASH1LQ9NR48 2969 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 ZBED9Q6R2W3 1325 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 ARID2Q68CP9 1835 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 NPM1P06748 294 aaKnown RBP eCLIP2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 NOM1Q5C9Z4 860 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 MYH3P11055 1940 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 PLEKHF1Q96S99 279 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 PRDM4Q9UKN5 801 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 ARHGEF10O15013 1369 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 CEMIPQ8WUJ3 1361 aa2.51□□□□□ -2.01
TRAPPC13-211ENST00000512009 PLXNB2O15031 1838 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 VPS72Q15906 364 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 CAMKK2Q96RR4 588 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 USP6P35125 1406 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 IDI1Q13907 227 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 CYP2E1P05181 493 aaPredicted RBP2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 RLFQ13129 1914 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 NUP98P52948 1817 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 CRB1P82279 1406 aa2.5□□□□□ -2.01
TRAPPC13-211ENST00000512009 NFATC2IPQ8NCF5 419 aa2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 CACNA1SQ13698 1873 aa2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 FANCGO15287 622 aa2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 CLEC17AQ6ZS10 378 aa2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 CFHR5Q9BXR6 569 aa2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 C19orf44Q9H6X5 657 aa2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 NKX1-1Q15270 411 aaPredicted RBP2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 C14orf93Q9H972 538 aaKnown RBP2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 RBM19Q9Y4C8 960 aaKnown RBP2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 L3MBTL2Q969R5 705 aa2.49□□□□□ -2.01
TRAPPC13-211ENST00000512009 FAM53CQ9NYF3 392 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 MYH2Q9UKX2 1941 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 SEC24BO95487 1268 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 DUSP27Q5VZP5 1158 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 OTOFQ9HC10 1997 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 MYH7BA7E2Y1 1941 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 KLRG2A4D1S0 409 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 HSPA1LP34931 641 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 PTGER2P43116 358 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 NCBP3Q53F19 620 aaKnown RBP2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 CDK11AQ9UQ88 783 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 FANCMQ8IYD8 2048 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 C20orf194Q5TEA3 1177 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 DNAJC5GQ8N7S2 189 aa2.48□□□□□ -2.01
TRAPPC13-211ENST00000512009 APLP2Q06481 763 aa2.47□□□□□ -2.01
TRAPPC13-211ENST00000512009 ROCK2O75116 1388 aaKnown RBP2.47□□□□□ -2.01
TRAPPC13-211ENST00000512009 ZEB1P37275 1124 aaPredicted RBP2.47□□□□□ -2.01
TRAPPC13-211ENST00000512009 LRP10Q7Z4F1 713 aa2.47□□□□□ -2.01
TRAPPC13-211ENST00000512009 IGHA2P01877 340 aa2.47□□□□□ -2.01
TRAPPC13-211ENST00000512009 SPATA31A5Q5VU36 1347 aa2.47□□□□□ -2.01
TRAPPC13-211ENST00000512009 SPATA31A7Q8IWB4 1347 aa2.47□□□□□ -2.01
TRAPPC13-211ENST00000512009 PLPPR3Q6T4P5 718 aa2.46□□□□□ -2.01
TRAPPC13-211ENST00000512009 ATG2AQ2TAZ0 1938 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 ARID4BQ4LE39 1312 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 SIP14410 1827 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 SIRT2Q8IXJ6 389 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 PRO3102Q9H379 93 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 TSGA10IPQ3SY00 556 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 THRAP3Q9Y2W1 955 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 PRR36Q9H6K5 1346 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 A0A1W2PP64 1363 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 MSH6P52701 1360 aa2.46□□□□□ -2.02
TRAPPC13-211ENST00000512009 ANKLE2Q86XL3 938 aa2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 COL4A5P29400 1685 aa2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 CADPS2Q86UW7 1296 aa2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 TOM1O60784 492 aa2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 CCER1Q8TC90 406 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 LTBP3Q9NS15 1303 aa2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 DSPP15924 2871 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms