RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 HDGFL2Q7Z4V5 671 aaPredicted RBP14.03□□□□□ -0.16
HOXA4-203ENST00000511914 USP6P35125 1406 aa14.03□□□□□ -0.16
HOXA4-203ENST00000511914 SLIT3O75094 1523 aa14.03□□□□□ -0.16
HOXA4-203ENST00000511914 SOX12O15370 315 aa14.02□□□□□ -0.17
HOXA4-203ENST00000511914 CC2D1BQ5T0F9 858 aaKnown RBP14.02□□□□□ -0.17
HOXA4-203ENST00000511914 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
HOXA4-203ENST00000511914 SPON1Q9HCB6 807 aa14.02□□□□□ -0.17
HOXA4-203ENST00000511914 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
HOXA4-203ENST00000511914 KCNQ2O43526 872 aa14.01□□□□□ -0.17
HOXA4-203ENST00000511914 DDB1Q16531 1140 aa14.01□□□□□ -0.17
HOXA4-203ENST00000511914 PTF1AQ7RTS3 328 aa14.01□□□□□ -0.17
HOXA4-203ENST00000511914 YTHDC1Q96MU7 727 aaKnown RBP14.01□□□□□ -0.17
HOXA4-203ENST00000511914 NSD3Q9BZ95 1437 aa14□□□□□ -0.17
HOXA4-203ENST00000511914 INSRP06213 1382 aa14□□□□□ -0.17
HOXA4-203ENST00000511914 AATKQ6ZMQ8 1374 aa14□□□□□ -0.17
HOXA4-203ENST00000511914 AXIN2Q9Y2T1 843 aa14□□□□□ -0.17
HOXA4-203ENST00000511914 GABBR2O75899 941 aa13.99□□□□□ -0.17
HOXA4-203ENST00000511914 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
HOXA4-203ENST00000511914 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
HOXA4-203ENST00000511914 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
HOXA4-203ENST00000511914 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
HOXA4-203ENST00000511914 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
HOXA4-203ENST00000511914 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
HOXA4-203ENST00000511914 CD163L1Q9NR16 1453 aa13.98□□□□□ -0.17
HOXA4-203ENST00000511914 PLSCR1O15162 318 aa13.97□□□□□ -0.17
HOXA4-203ENST00000511914 PPP2R1AP30153 589 aa13.97□□□□□ -0.17
HOXA4-203ENST00000511914 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
HOXA4-203ENST00000511914 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
HOXA4-203ENST00000511914 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
HOXA4-203ENST00000511914 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
HOXA4-203ENST00000511914 LTN1O94822 1766 aa13.96□□□□□ -0.18
HOXA4-203ENST00000511914 ZBTB7AO95365 584 aa13.95□□□□□ -0.18
HOXA4-203ENST00000511914 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
HOXA4-203ENST00000511914 EDC4Q6P2E9 1401 aaKnown RBP13.95□□□□□ -0.18
HOXA4-203ENST00000511914 PRR29P0C7W0 189 aa13.94□□□□□ -0.18
HOXA4-203ENST00000511914 CNGB1Q14028 1251 aaPredicted RBP13.94□□□□□ -0.18
HOXA4-203ENST00000511914 MON2Q7Z3U7 1717 aa13.94□□□□□ -0.18
HOXA4-203ENST00000511914 PROM2Q8N271 834 aa13.94□□□□□ -0.18
HOXA4-203ENST00000511914 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
HOXA4-203ENST00000511914 ARHGEF25Q86VW2 580 aa13.93□□□□□ -0.18
HOXA4-203ENST00000511914 FAM9BQ8IZU0 186 aa13.93□□□□□ -0.18
HOXA4-203ENST00000511914 NFAT5O94916 1531 aa13.93□□□□□ -0.18
HOXA4-203ENST00000511914 NHSQ6T4R5 1651 aa13.92□□□□□ -0.18
HOXA4-203ENST00000511914 FYB1O15117 783 aa13.92□□□□□ -0.18
HOXA4-203ENST00000511914 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
HOXA4-203ENST00000511914 TXNRD1Q16881 649 aa13.91□□□□□ -0.18
HOXA4-203ENST00000511914 KCNH5Q8NCM2 988 aa13.91□□□□□ -0.18
HOXA4-203ENST00000511914 EXOC5O00471 708 aa13.9□□□□□ -0.18
HOXA4-203ENST00000511914 ACSBG1Q96GR2 724 aa13.9□□□□□ -0.18
HOXA4-203ENST00000511914 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
HOXA4-203ENST00000511914 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
HOXA4-203ENST00000511914 STK32BQ9NY57 414 aa13.9□□□□□ -0.18
HOXA4-203ENST00000511914 UTRNP46939 3433 aa13.9□□□□□ -0.18
HOXA4-203ENST00000511914 BTAF1O14981 1849 aa13.9□□□□□ -0.18
HOXA4-203ENST00000511914 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
HOXA4-203ENST00000511914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.89□□□□□ -0.19
HOXA4-203ENST00000511914 BCL9O00512 1426 aa13.89□□□□□ -0.19
HOXA4-203ENST00000511914 TNS2Q63HR2 1409 aa13.89□□□□□ -0.19
HOXA4-203ENST00000511914 TTC21AQ8NDW8 1320 aa13.89□□□□□ -0.19
HOXA4-203ENST00000511914 PTGER2P43116 358 aa13.88□□□□□ -0.19
HOXA4-203ENST00000511914 SLC15A2Q16348 729 aa13.88□□□□□ -0.19
HOXA4-203ENST00000511914 ZBED9Q6R2W3 1325 aa13.88□□□□□ -0.19
HOXA4-203ENST00000511914 ABCC6O95255 1503 aa13.87□□□□□ -0.19
HOXA4-203ENST00000511914 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
HOXA4-203ENST00000511914 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
HOXA4-203ENST00000511914 CHD4Q14839 1912 aa13.87□□□□□ -0.19
HOXA4-203ENST00000511914 USP54Q70EL1 1684 aa13.87□□□□□ -0.19
HOXA4-203ENST00000511914 NLRP2Q9NX02 1062 aa13.86□□□□□ -0.19
HOXA4-203ENST00000511914 ANKRD26Q9UPS8 1709 aa13.86□□□□□ -0.19
HOXA4-203ENST00000511914 PAPPAQ13219 1627 aa13.86□□□□□ -0.19
HOXA4-203ENST00000511914 WDR43Q15061 677 aaKnown RBP eCLIP13.85□□□□□ -0.19
HOXA4-203ENST00000511914 NME9Q86XW9 330 aa13.85□□□□□ -0.19
HOXA4-203ENST00000511914 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
HOXA4-203ENST00000511914 GGNBP2Q9H3C7 697 aa13.85□□□□□ -0.19
HOXA4-203ENST00000511914 MTHFSP49914 203 aa13.84□□□□□ -0.19
HOXA4-203ENST00000511914 SYT17Q9BSW7 474 aa13.84□□□□□ -0.19
HOXA4-203ENST00000511914 ERBB3P21860 1342 aa13.84□□□□□ -0.19
HOXA4-203ENST00000511914 LHX8Q68G74 356 aa13.83□□□□□ -0.2
HOXA4-203ENST00000511914 COG3Q96JB2 828 aa13.83□□□□□ -0.2
HOXA4-203ENST00000511914 MTFR1LQ9H019 292 aa13.83□□□□□ -0.2
HOXA4-203ENST00000511914 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.2
HOXA4-203ENST00000511914 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
HOXA4-203ENST00000511914 IL2RBP14784 551 aa13.82□□□□□ -0.2
HOXA4-203ENST00000511914 ADAMTS8Q9UP79 889 aa13.82□□□□□ -0.2
HOXA4-203ENST00000511914 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
HOXA4-203ENST00000511914 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
HOXA4-203ENST00000511914 ZNF784Q8NCA9 323 aaPredicted RBP13.81□□□□□ -0.2
HOXA4-203ENST00000511914 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
HOXA4-203ENST00000511914 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
HOXA4-203ENST00000511914 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
HOXA4-203ENST00000511914 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
HOXA4-203ENST00000511914 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
HOXA4-203ENST00000511914 SGIP1Q9BQI5 828 aa13.8□□□□□ -0.2
HOXA4-203ENST00000511914 NUDCQ9Y266 331 aa13.8□□□□□ -0.2
HOXA4-203ENST00000511914 QSER1Q2KHR3 1735 aa13.8□□□□□ -0.2
HOXA4-203ENST00000511914 TNNT2P45379 298 aaPredicted RBP13.79□□□□□ -0.2
HOXA4-203ENST00000511914 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
HOXA4-203ENST00000511914 ARXQ96QS3 562 aa13.79□□□□□ -0.2
HOXA4-203ENST00000511914 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
HOXA4-203ENST00000511914 LRRC4BQ9NT99 713 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms