RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 ZIC2O95409 532 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 KCNMA1Q12791 1236 aa6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 INTS6LQ5JSJ4 861 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 CFAP70Q5T0N1 1121 aa6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 MRPL14Q6P1L8 145 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 ITPKCQ96DU7 683 aa6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 ACIN1Q9UKV3 1341 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-207ENST00000511409 ATP9BO43861 1147 aa6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 SCARF1Q14162 830 aa6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 CDCA8Q53HL2 280 aa6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 PPP1R26Q5T8A7 1209 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 Q6ZVU0 165 aa6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 MEIOBQ8N635 442 aa6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 TRIM52Q96A61 297 aa6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 PGPEP1Q9NXJ5 209 aa6.38□□□□□ -1.39
TRAPPC11-207ENST00000511409 GIGYF1O75420 1035 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 GSK3AP49840 483 aa6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 RAB15P59190 212 aa6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 SUZ12Q15022 739 aaKnown RBP6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 DEPDC4Q8N2C3 294 aa6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 PBXIP1Q96AQ6 731 aa6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 ZFAND3Q9H8U3 227 aa6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 MAFBQ9Y5Q3 323 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-207ENST00000511409 PPP1R15AO75807 674 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC11-207ENST00000511409 PLPP7Q8NBV4 271 aa6.36□□□□□ -1.39
TRAPPC11-207ENST00000511409 NFATC2IPQ8NCF5 419 aa6.36□□□□□ -1.39
TRAPPC11-207ENST00000511409 USP17L3A6NCW0 530 aa6.35□□□□□ -1.39
TRAPPC11-207ENST00000511409 USP17L4A6NCW7 530 aa6.35□□□□□ -1.39
TRAPPC11-207ENST00000511409 USP17L5A8MUK1 530 aa6.35□□□□□ -1.39
TRAPPC11-207ENST00000511409 RNF20Q5VTR2 975 aa6.35□□□□□ -1.39
TRAPPC11-207ENST00000511409 USP17L2Q6R6M4 530 aa6.35□□□□□ -1.39
TRAPPC11-207ENST00000511409 USP17L1Q7RTZ2 530 aa6.35□□□□□ -1.39
TRAPPC11-207ENST00000511409 VRTNQ9H8Y1 702 aa6.35□□□□□ -1.39
TRAPPC11-207ENST00000511409 NCOA4Q13772 614 aa6.34□□□□□ -1.39
TRAPPC11-207ENST00000511409 EML3Q32P44 896 aa6.34□□□□□ -1.39
TRAPPC11-207ENST00000511409 OXLD1Q5BKU9 147 aa6.34□□□□□ -1.39
TRAPPC11-207ENST00000511409 PURBQ96QR8 312 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-207ENST00000511409 TSEN34Q9BSV6 310 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-207ENST00000511409 DOLKQ9UPQ8 538 aa6.34□□□□□ -1.39
TRAPPC11-207ENST00000511409 ERVH48-1M5A8F1 160 aa6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 PDIA4P13667 645 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 MAP7D1Q3KQU3 841 aa6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 TSGA10IPQ3SY00 556 aa6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 LINC00528Q8N1L1 170 aa6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 PHTF2Q8N3S3 785 aa6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 MKRN1Q9UHC7 482 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 PCDHB11Q9Y5F2 797 aa6.33□□□□□ -1.4
TRAPPC11-207ENST00000511409 LILRA1O75019 489 aa6.32□□□□□ -1.4
TRAPPC11-207ENST00000511409 UPP2O95045 317 aa6.32□□□□□ -1.4
TRAPPC11-207ENST00000511409 PLEKHM2Q8IWE5 1019 aa6.32□□□□□ -1.4
TRAPPC11-207ENST00000511409 RETREG2Q8NC44 543 aa6.32□□□□□ -1.4
TRAPPC11-207ENST00000511409 CCDC85AQ96PX6 553 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC11-207ENST00000511409 ESF1Q9H501 851 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-207ENST00000511409 RNF225M0QZC1 329 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC11-207ENST00000511409 SPINT1O43278 529 aa6.31□□□□□ -1.4
TRAPPC11-207ENST00000511409 LZTS3O60299 673 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC11-207ENST00000511409 CSB-PGBD3P0DP91 1061 aa6.31□□□□□ -1.4
TRAPPC11-207ENST00000511409 LARP1Q6PKG0 1096 aaKnown RBP6.31□□□□□ -1.4
TRAPPC11-207ENST00000511409 ZNF784Q8NCA9 323 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC11-207ENST00000511409 CHIC2Q9UKJ5 165 aa6.31□□□□□ -1.4
TRAPPC11-207ENST00000511409 SOS2Q07890 1332 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 PPFIA3O75145 1194 aa6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 RASA1P20936 1047 aa6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 ERVK-9P63128 1117 aa6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 SRPK2P78362 688 aaKnown RBP6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 CBLBQ13191 982 aa6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 KANK4Q5T7N3 995 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 CDCA7Q9BWT1 371 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 TMPRSS4Q9NRS4 437 aa6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 NOD1Q9Y239 953 aa6.3□□□□□ -1.4
TRAPPC11-207ENST00000511409 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 ATP5J2-PTCD1G3V325 749 aa6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 ATG7O95352 703 aa6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 ADH1AP07327 375 aa6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 ADD1P35611 737 aaKnown RBP6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 USP4Q13107 963 aa6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 TRIM50Q86XT4 487 aa6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 KDF1Q8NAX2 398 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 SIRT1Q96EB6 747 aa6.29□□□□□ -1.4
TRAPPC11-207ENST00000511409 MAN1A2O60476 641 aa6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 MYCP01106 439 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 BMP2P12643 396 aa6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 PSME1Q06323 249 aa6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 OGFOD1Q8N543 542 aa6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 KCTD17Q8N5Z5 321 aa6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 ZNF594Q96JF6 807 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 RBM19Q9Y4C8 960 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-207ENST00000511409 USP17L15C9J2P7 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L10C9JJH3 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L13C9JLJ4 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L12C9JPN9 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L11C9JVI0 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L21D6R901 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L18D6R9N7 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L22D6RA61 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L17D6RBQ6 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L19D6RCP7 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 USP17L20D6RJB6 530 aa6.27□□□□□ -1.41
TRAPPC11-207ENST00000511409 PTGIRP43119 386 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms