RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
HMGB3P13-201ENST00000511263 ZNF385CQ66K41 422 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P13-201ENST00000511263 COG6Q9Y2V7 657 aa8.38□□□□□ -1.07
HMGB3P13-201ENST00000511263 RASSF7Q02833 373 aa8.37□□□□□ -1.07
HMGB3P13-201ENST00000511263 VWA5B2Q8N398 1253 aa8.37□□□□□ -1.07
HMGB3P13-201ENST00000511263 INSM2Q96T92 566 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P13-201ENST00000511263 FBXO45P0C2W1 286 aa8.36□□□□□ -1.07
HMGB3P13-201ENST00000511263 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
HMGB3P13-201ENST00000511263 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
HMGB3P13-201ENST00000511263 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
HMGB3P13-201ENST00000511263 GDF11O95390 407 aa8.35□□□□□ -1.07
HMGB3P13-201ENST00000511263 ITGA6P23229 1130 aa8.35□□□□□ -1.07
HMGB3P13-201ENST00000511263 ZNF395Q9H8N7 513 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P13-201ENST00000511263 SENP3-EIF4A1A0A087X0R7 540 aa8.34□□□□□ -1.07
HMGB3P13-201ENST00000511263 CDC14CA4D256 554 aa8.34□□□□□ -1.07
HMGB3P13-201ENST00000511263 A6NJR5 290 aa8.34□□□□□ -1.07
HMGB3P13-201ENST00000511263 SEMA3FQ13275 785 aa8.34□□□□□ -1.07
HMGB3P13-201ENST00000511263 SVOPQ8N4V2 548 aa8.34□□□□□ -1.07
HMGB3P13-201ENST00000511263 TMPRSS4Q9NRS4 437 aa8.34□□□□□ -1.07
HMGB3P13-201ENST00000511263 RAB15P59190 212 aa8.32□□□□□ -1.08
HMGB3P13-201ENST00000511263 PROSER2Q86WR7 435 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P13-201ENST00000511263 RNF217Q8TC41 542 aa8.32□□□□□ -1.08
HMGB3P13-201ENST00000511263 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P13-201ENST00000511263 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
HMGB3P13-201ENST00000511263 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P13-201ENST00000511263 ZNF784Q8NCA9 323 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P13-201ENST00000511263 ESF1Q9H501 851 aaKnown RBP8.31□□□□□ -1.08
HMGB3P13-201ENST00000511263 NISCHQ9Y2I1 1504 aa8.3□□□□□ -1.08
HMGB3P13-201ENST00000511263 ARHGEF15O94989 841 aa8.3□□□□□ -1.08
HMGB3P13-201ENST00000511263 ADD1P35611 737 aaKnown RBP8.3□□□□□ -1.08
HMGB3P13-201ENST00000511263 IRF5Q13568 498 aa8.3□□□□□ -1.08
HMGB3P13-201ENST00000511263 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
HMGB3P13-201ENST00000511263 LILRA1O75019 489 aa8.29□□□□□ -1.08
HMGB3P13-201ENST00000511263 IRS1P35568 1242 aa8.29□□□□□ -1.08
HMGB3P13-201ENST00000511263 VAC14Q08AM6 782 aa8.29□□□□□ -1.08
HMGB3P13-201ENST00000511263 SLFNL1Q499Z3 407 aa8.29□□□□□ -1.08
HMGB3P13-201ENST00000511263 FOXD4L5Q5VV16 416 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P13-201ENST00000511263 CUEDC1Q9NWM3 386 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P13-201ENST00000511263 RNF225M0QZC1 329 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P13-201ENST00000511263 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
HMGB3P13-201ENST00000511263 GPR37L1O60883 481 aa8.28□□□□□ -1.08
HMGB3P13-201ENST00000511263 POM121Q96HA1 1249 aa8.28□□□□□ -1.08
HMGB3P13-201ENST00000511263 ADH1AP07327 375 aa8.27□□□□□ -1.09
HMGB3P13-201ENST00000511263 C14orf37Q86TY3 774 aa8.27□□□□□ -1.09
HMGB3P13-201ENST00000511263 CLUAP1Q96AJ1 413 aa8.27□□□□□ -1.09
HMGB3P13-201ENST00000511263 SIRT1Q96EB6 747 aa8.27□□□□□ -1.09
HMGB3P13-201ENST00000511263 ZMYND15Q9H091 742 aa8.27□□□□□ -1.09
HMGB3P13-201ENST00000511263 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
HMGB3P13-201ENST00000511263 GAS6Q14393 721 aa8.26□□□□□ -1.09
HMGB3P13-201ENST00000511263 LYPD4Q6UWN0 246 aa8.26□□□□□ -1.09
HMGB3P13-201ENST00000511263 ESPNB1AK53 854 aa8.25□□□□□ -1.09
HMGB3P13-201ENST00000511263 PTGIRP43119 386 aa8.25□□□□□ -1.09
HMGB3P13-201ENST00000511263 GPAT2Q6NUI2 795 aa8.25□□□□□ -1.09
HMGB3P13-201ENST00000511263 CEP126Q9P2H0 1117 aa8.25□□□□□ -1.09
HMGB3P13-201ENST00000511263 MAP7D1Q3KQU3 841 aa8.24□□□□□ -1.09
HMGB3P13-201ENST00000511263 RNF135Q8IUD6 432 aa8.24□□□□□ -1.09
HMGB3P13-201ENST00000511263 LZTS3O60299 673 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P13-201ENST00000511263 MYCP01106 439 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P13-201ENST00000511263 RHOQP17081 205 aa8.23□□□□□ -1.09
HMGB3P13-201ENST00000511263 CYLDQ9NQC7 956 aa8.23□□□□□ -1.09
HMGB3P13-201ENST00000511263 TRAK2O60296 914 aa8.22□□□□□ -1.09
HMGB3P13-201ENST00000511263 GIGYF1O75420 1035 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P13-201ENST00000511263 MARSP56192 900 aaKnown RBP8.22□□□□□ -1.09
HMGB3P13-201ENST00000511263 LYSMD3Q7Z3D4 306 aa8.22□□□□□ -1.09
HMGB3P13-201ENST00000511263 PRICKLE2Q7Z3G6 844 aa8.22□□□□□ -1.09
HMGB3P13-201ENST00000511263 FNBP4Q8N3X1 1017 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P13-201ENST00000511263 DNMT3AQ9Y6K1 912 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P13-201ENST00000511263 CELA2BP08218 269 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P13-201ENST00000511263 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
HMGB3P13-201ENST00000511263 USP4Q13107 963 aa8.21□□□□□ -1.1
HMGB3P13-201ENST00000511263 NFATC2IPQ8NCF5 419 aa8.21□□□□□ -1.1
HMGB3P13-201ENST00000511263 CALR3Q96L12 384 aaKnown RBP8.21□□□□□ -1.1
HMGB3P13-201ENST00000511263 ALG2Q9H553 416 aa8.21□□□□□ -1.1
HMGB3P13-201ENST00000511263 GPR25O00155 361 aa8.2□□□□□ -1.1
HMGB3P13-201ENST00000511263 HDGFL1Q5TGJ6 251 aa8.2□□□□□ -1.1
HMGB3P13-201ENST00000511263 DOLKQ9UPQ8 538 aa8.2□□□□□ -1.1
HMGB3P13-201ENST00000511263 CC2D2BQ6DHV5 1058 aa8.19□□□□□ -1.1
HMGB3P13-201ENST00000511263 ZNF837Q96EG3 531 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P13-201ENST00000511263 PCDHB11Q9Y5F2 797 aa8.19□□□□□ -1.1
HMGB3P13-201ENST00000511263 RNF144AP50876 292 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P13-201ENST00000511263 CYP2U1Q7Z449 544 aa8.18□□□□□ -1.1
HMGB3P13-201ENST00000511263 GLMNQ92990 594 aa8.18□□□□□ -1.1
HMGB3P13-201ENST00000511263 KANK3Q6NY19 840 aa8.17□□□□□ -1.1
HMGB3P13-201ENST00000511263 SCARF2Q96GP6 870 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P13-201ENST00000511263 SKIP12755 728 aa8.16□□□□□ -1.1
HMGB3P13-201ENST00000511263 MAP3K10Q02779 954 aa8.16□□□□□ -1.1
HMGB3P13-201ENST00000511263 DBN1Q16643 649 aa8.16□□□□□ -1.1
HMGB3P13-201ENST00000511263 EML3Q32P44 896 aa8.16□□□□□ -1.1
HMGB3P13-201ENST00000511263 PLPP7Q8NBV4 271 aa8.16□□□□□ -1.1
HMGB3P13-201ENST00000511263 CNTNAP5Q8WYK1 1306 aa8.15□□□□□ -1.1
HMGB3P13-201ENST00000511263 POM121CA8CG34 1229 aa8.15□□□□□ -1.1
HMGB3P13-201ENST00000511263 MEN1O00255 615 aa8.15□□□□□ -1.1
HMGB3P13-201ENST00000511263 ERVK-9P63128 1117 aa8.15□□□□□ -1.1
HMGB3P13-201ENST00000511263 TRIM22Q8IYM9 498 aa8.15□□□□□ -1.1
HMGB3P13-201ENST00000511263 PHTF2Q8N3S3 785 aa8.15□□□□□ -1.1
HMGB3P13-201ENST00000511263 IGF1RP08069 1367 aa8.14□□□□□ -1.11
HMGB3P13-201ENST00000511263 ATP5J2-PTCD1G3V325 749 aa8.14□□□□□ -1.11
HMGB3P13-201ENST00000511263 RIPOR1Q6ZS17 1223 aa8.14□□□□□ -1.11
HMGB3P13-201ENST00000511263 TRIM50Q86XT4 487 aa8.14□□□□□ -1.11
HMGB3P13-201ENST00000511263 ZNF777Q9ULD5 760 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms