RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CPDO75976 1380 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 ROBO2Q9HCK4 1378 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 IQGAP3Q86VI3 1631 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 EIF6P56537 245 aaKnown RBP3.75□□□□□ -1.81
CLOCK-209ENST00000511124 EZH2Q15910 746 aaKnown RBP3.75□□□□□ -1.81
CLOCK-209ENST00000511124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.75□□□□□ -1.812e-7■■■■■ 28.3
CLOCK-209ENST00000511124 MYOM2P54296 1465 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 H0YIN7 160 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 TGFB2P61812 414 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 FSTL1Q12841 308 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 WWC1Q8IX03 1113 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 IP6K1Q92551 441 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 SHPRHQ149N8 1683 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 RGS12O14924 1447 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 NEXMIFQ5QGS0 1516 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 DLC1Q96QB1 1528 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 SSFA2P28290 1259 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 DALRD3Q5D0E6 543 aaKnown RBP3.74□□□□□ -1.81
CLOCK-209ENST00000511124 PIM2Q9P1W9 311 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 NYXQ9GZU5 481 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 BCS1LQ9Y276 419 aa3.74□□□□□ -1.81
CLOCK-209ENST00000511124 SSH2Q76I76 1423 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 NRXN1Q9ULB1 1477 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 CA12O43570 354 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 ZBTB7AO95365 584 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 C1QTNF8P60827 252 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 HSP90AB3PQ58FF7 597 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 KIF6Q6ZMV9 814 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 GCC1Q96CN9 775 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 CFAP44Q96MT7 982 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 REM2Q8IYK8 340 aaPredicted RBP3.73□□□□□ -1.81
CLOCK-209ENST00000511124 RGS17Q9UGC6 210 aaPredicted RBP3.73□□□□□ -1.81
CLOCK-209ENST00000511124 RTL1A6NKG5 1358 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 TULP4Q9NRJ4 1543 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 PRAG1Q86YV5 1406 aa3.73□□□□□ -1.81
CLOCK-209ENST00000511124 VEGFAP15692 232 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 TRIM26Q12899 539 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 OTUD7BQ6GQQ9 843 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 LARP1Q6PKG0 1096 aaKnown RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 DDX17Q92841 729 aaKnown RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 ST20-MTHFSA0A0A6YYL1 179 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 ALDH1B1P30837 517 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 ATP6V1AP38606 617 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 MTHFSP49914 203 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 ZNF530Q6P9A1 599 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 TNS4Q8IZW8 715 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 ERVV-2B6SEH9 535 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 TOMM70O94826 608 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 MPRIPQ6WCQ1 1025 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 TMC4Q7Z404 712 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 PNMA8AQ86V59 439 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 RBM46Q8TBY0 533 aaKnown RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 HOOK2Q96ED9 719 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 ACSBG1Q96GR2 724 aa3.72□□□□□ -1.81
CLOCK-209ENST00000511124 ZNF330Q9Y3S2 320 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-209ENST00000511124 LRRIQ1Q96JM4 1722 aa3.71□□□□□ -1.81
CLOCK-209ENST00000511124 HSPA6P17066 643 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 GOLGA2Q08379 1002 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 ARHGEF25Q86VW2 580 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 DCAF5Q96JK2 942 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 CAMKK2Q96RR4 588 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 DISP2A7MBM2 1401 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 USP6P35125 1406 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 NSD2O96028 1365 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 SLIT2O94813 1529 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 GNPATO15228 680 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 RPGRQ92834 1020 aaKnown RBP3.71□□□□□ -1.82
CLOCK-209ENST00000511124 EYA3Q99504 573 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 SYT17Q9BSW7 474 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.71□□□□□ -1.82
CLOCK-209ENST00000511124 TMEM131LA2VDJ0 1609 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 FLT4P35916 1363 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.71□□□□□ -1.82
CLOCK-209ENST00000511124 TPTE2Q6XPS3 522 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 RTKN2Q8IZC4 609 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 ZNF622Q969S3 477 aaKnown RBP eCLIP3.71□□□□□ -1.823e-6■■□□□ 12.3
CLOCK-209ENST00000511124 SETDB2Q96T68 719 aa3.71□□□□□ -1.82
CLOCK-209ENST00000511124 EDC4Q6P2E9 1401 aaKnown RBP3.71□□□□□ -1.82
CLOCK-209ENST00000511124 CHD2O14647 1828 aaKnown RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 DDX58O95786 925 aaKnown RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 MAP2K1Q02750 393 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 WDR43Q15061 677 aaKnown RBP eCLIP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 RC3H1Q5TC82 1133 aaKnown RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 PCGF6Q9BYE7 350 aa3.7□□□□□ -1.82
CLOCK-209ENST00000511124 FHDC1Q9C0D6 1143 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 COL16A1Q07092 1604 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 COL14A1Q05707 1796 aaKnown RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 PRIM1P49642 420 aaKnown RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 CTCFP49711 727 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 BCL2L13Q9BXK5 485 aa3.7□□□□□ -1.82
CLOCK-209ENST00000511124 TULP1O00294 542 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-209ENST00000511124 CAPN2P17655 700 aa3.7□□□□□ -1.82
CLOCK-209ENST00000511124 MMP14P50281 582 aa3.7□□□□□ -1.82
CLOCK-209ENST00000511124 PPP1R42Q7Z4L9 355 aa3.7□□□□□ -1.82
CLOCK-209ENST00000511124 TTLL6Q8N841 843 aa3.7□□□□□ -1.82
CLOCK-209ENST00000511124 USP19O94966 1318 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 H7C1D1 291 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 TCIRG1Q13488 830 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 TNIP1Q15025 636 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 TPRNQ4KMQ1 711 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms