RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 NCAPD2Q15021 1401 aa18.31■□□□□ 0.52
CYSTM1-204ENST00000509789 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
CYSTM1-204ENST00000509789 SPATA31A1Q5TZJ5 1347 aa18.3■□□□□ 0.52
CYSTM1-204ENST00000509789 THRAP3Q9Y2W1 955 aaKnown RBP18.3■□□□□ 0.52
CYSTM1-204ENST00000509789 IL2RBP14784 551 aa18.29■□□□□ 0.52
CYSTM1-204ENST00000509789 DSG3P32926 999 aa18.29■□□□□ 0.52
CYSTM1-204ENST00000509789 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
CYSTM1-204ENST00000509789 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
CYSTM1-204ENST00000509789 TRPC5Q9UL62 973 aaPredicted RBP18.29■□□□□ 0.52
CYSTM1-204ENST00000509789 APAF1O14727 1248 aa18.28■□□□□ 0.52
CYSTM1-204ENST00000509789 ZNF772Q68DY9 489 aaPredicted RBP18.28■□□□□ 0.52
CYSTM1-204ENST00000509789 NRAPQ86VF7 1730 aa18.28■□□□□ 0.52
CYSTM1-204ENST00000509789 SLC4A2P04920 1241 aa18.27■□□□□ 0.52
CYSTM1-204ENST00000509789 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
CYSTM1-204ENST00000509789 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
CYSTM1-204ENST00000509789 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.52
CYSTM1-204ENST00000509789 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
CYSTM1-204ENST00000509789 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
CYSTM1-204ENST00000509789 SPG7Q9UQ90 795 aa18.26■□□□□ 0.51
CYSTM1-204ENST00000509789 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
CYSTM1-204ENST00000509789 NFE2L2Q16236 605 aa18.25■□□□□ 0.51
CYSTM1-204ENST00000509789 BARGINQ6ZT62 677 aa18.25■□□□□ 0.51
CYSTM1-204ENST00000509789 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
CYSTM1-204ENST00000509789 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
CYSTM1-204ENST00000509789 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
CYSTM1-204ENST00000509789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.25■□□□□ 0.51
CYSTM1-204ENST00000509789 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.24■□□□□ 0.51
CYSTM1-204ENST00000509789 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
CYSTM1-204ENST00000509789 ATRNO75882 1429 aa18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 CAPN15O75808 1086 aa18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 RIPK4P57078 832 aa18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 NEUROD2Q15784 382 aa18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 ZCRB1Q8TBF4 217 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-204ENST00000509789 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
CYSTM1-204ENST00000509789 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
CYSTM1-204ENST00000509789 MEGF6O75095 1541 aa18.22■□□□□ 0.51
CYSTM1-204ENST00000509789 EXOC5O00471 708 aa18.21■□□□□ 0.51
CYSTM1-204ENST00000509789 FAM98CQ17RN3 349 aaKnown RBP18.21■□□□□ 0.51
CYSTM1-204ENST00000509789 OVOS2A0A0G2JMS6 1433 aa18.21■□□□□ 0.51
CYSTM1-204ENST00000509789 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
CYSTM1-204ENST00000509789 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
CYSTM1-204ENST00000509789 DISP2A7MBM2 1401 aa18.2■□□□□ 0.5
CYSTM1-204ENST00000509789 A0A0G2JS52 829 aa18.19■□□□□ 0.5
CYSTM1-204ENST00000509789 MYT1Q01538 1121 aa18.19■□□□□ 0.5
CYSTM1-204ENST00000509789 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
CYSTM1-204ENST00000509789 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
CYSTM1-204ENST00000509789 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
CYSTM1-204ENST00000509789 AKAP4Q5JQC9 854 aa18.18■□□□□ 0.5
CYSTM1-204ENST00000509789 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
CYSTM1-204ENST00000509789 DDB1Q16531 1140 aa18.17■□□□□ 0.5
CYSTM1-204ENST00000509789 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
CYSTM1-204ENST00000509789 IFNL2Q8IZJ0 200 aa18.17■□□□□ 0.5
CYSTM1-204ENST00000509789 DDX54Q8TDD1 881 aaKnown RBP18.17■□□□□ 0.5
CYSTM1-204ENST00000509789 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
CYSTM1-204ENST00000509789 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
CYSTM1-204ENST00000509789 PARP4Q9UKK3 1724 aaKnown RBP18.16■□□□□ 0.5
CYSTM1-204ENST00000509789 ONECUT3O60422 494 aaPredicted RBP18.16■□□□□ 0.5
CYSTM1-204ENST00000509789 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
CYSTM1-204ENST00000509789 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
CYSTM1-204ENST00000509789 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
CYSTM1-204ENST00000509789 CYP27B1O15528 508 aa18.15■□□□□ 0.5
CYSTM1-204ENST00000509789 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
CYSTM1-204ENST00000509789 PHKG2P15735 406 aa18.15■□□□□ 0.5
CYSTM1-204ENST00000509789 RXRBP28702 533 aa18.15■□□□□ 0.5
CYSTM1-204ENST00000509789 WWC1Q8IX03 1113 aa18.15■□□□□ 0.5
CYSTM1-204ENST00000509789 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
CYSTM1-204ENST00000509789 GLI3P10071 1580 aa18.13■□□□□ 0.49
CYSTM1-204ENST00000509789 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
CYSTM1-204ENST00000509789 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
CYSTM1-204ENST00000509789 SEPT12Q8IYM1 358 aa18.13■□□□□ 0.49
CYSTM1-204ENST00000509789 POTEHQ6S545 545 aa18.12■□□□□ 0.49
CYSTM1-204ENST00000509789 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
CYSTM1-204ENST00000509789 MCM10Q7L590 875 aa18.12■□□□□ 0.49
CYSTM1-204ENST00000509789 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
CYSTM1-204ENST00000509789 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
CYSTM1-204ENST00000509789 RNMTO43148 476 aaKnown RBP18.11■□□□□ 0.49
CYSTM1-204ENST00000509789 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
CYSTM1-204ENST00000509789 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
CYSTM1-204ENST00000509789 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
CYSTM1-204ENST00000509789 TNS2Q63HR2 1409 aa18.11■□□□□ 0.49
CYSTM1-204ENST00000509789 ZNF521Q96K83 1311 aa18.1■□□□□ 0.49
CYSTM1-204ENST00000509789 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
CYSTM1-204ENST00000509789 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
CYSTM1-204ENST00000509789 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
CYSTM1-204ENST00000509789 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
CYSTM1-204ENST00000509789 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
CYSTM1-204ENST00000509789 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
CYSTM1-204ENST00000509789 MARCH10Q8NA82 808 aaPredicted RBP18.08■□□□□ 0.48
CYSTM1-204ENST00000509789 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.48
CYSTM1-204ENST00000509789 IL16Q14005 1332 aa18.07■□□□□ 0.48
CYSTM1-204ENST00000509789 TEFQ10587 303 aa18.07■□□□□ 0.48
CYSTM1-204ENST00000509789 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
CYSTM1-204ENST00000509789 ERVV-2B6SEH9 535 aa18.06■□□□□ 0.48
CYSTM1-204ENST00000509789 CEMIPQ8WUJ3 1361 aa18.05■□□□□ 0.48
CYSTM1-204ENST00000509789 E9PSI1 815 aa18.05■□□□□ 0.48
CYSTM1-204ENST00000509789 GNAI1P63096 354 aa18.05■□□□□ 0.48
CYSTM1-204ENST00000509789 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms