RNA–Protein interactions for RNA: ENST00000508642.1

SPOCK1-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-205ENST00000508642 NUDCQ9Y266 331 aa9.59□□□□□ -0.87
SPOCK1-205ENST00000508642 TOGARAM1Q9Y4F4 1720 aa9.59□□□□□ -0.87
SPOCK1-205ENST00000508642 RGS12O14924 1447 aa9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 TNS2Q63HR2 1409 aa9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 U2SURPO15042 1029 aaKnown RBP9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 IL2RBP14784 551 aa9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 CCDC184Q52MB2 194 aa9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 ADAMTS7Q9UKP4 1686 aa9.58□□□□□ -0.88
SPOCK1-205ENST00000508642 SULT6B1Q6IMI4 303 aa9.57□□□□□ -0.88
SPOCK1-205ENST00000508642 RAPGEF4Q8WZA2 1011 aa9.57□□□□□ -0.88
SPOCK1-205ENST00000508642 MRS2Q9HD23 443 aa9.57□□□□□ -0.88
SPOCK1-205ENST00000508642 NHSQ6T4R5 1651 aa9.57□□□□□ -0.88
SPOCK1-205ENST00000508642 CCER2I3L3R5 266 aa9.56□□□□□ -0.88
SPOCK1-205ENST00000508642 HMOX1P09601 288 aa9.56□□□□□ -0.88
SPOCK1-205ENST00000508642 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
SPOCK1-205ENST00000508642 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPOCK1-205ENST00000508642 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
SPOCK1-205ENST00000508642 MIER1Q8N108 512 aa9.56□□□□□ -0.88
SPOCK1-205ENST00000508642 TNS1Q9HBL0 1735 aaKnown RBP9.56□□□□□ -0.88
SPOCK1-205ENST00000508642 BTAF1O14981 1849 aa9.55□□□□□ -0.88
SPOCK1-205ENST00000508642 FCHSD2O94868 740 aa9.55□□□□□ -0.88
SPOCK1-205ENST00000508642 TATP17735 454 aaPredicted RBP9.55□□□□□ -0.88
SPOCK1-205ENST00000508642 WDR43Q15061 677 aaKnown RBP eCLIP9.55□□□□□ -0.88
SPOCK1-205ENST00000508642 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
SPOCK1-205ENST00000508642 A0A0G2JS52 829 aa9.54□□□□□ -0.88
SPOCK1-205ENST00000508642 MYT1Q01538 1121 aa9.54□□□□□ -0.88
SPOCK1-205ENST00000508642 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
SPOCK1-205ENST00000508642 PNISRQ8TF01 805 aaKnown RBP9.54□□□□□ -0.88
SPOCK1-205ENST00000508642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPOCK1-205ENST00000508642 EXOC5O00471 708 aa9.53□□□□□ -0.88
SPOCK1-205ENST00000508642 PRKAR2BP31323 418 aa9.53□□□□□ -0.88
SPOCK1-205ENST00000508642 DDB1Q16531 1140 aa9.53□□□□□ -0.88
SPOCK1-205ENST00000508642 ZCRB1Q8TBF4 217 aaKnown RBP9.53□□□□□ -0.88
SPOCK1-205ENST00000508642 PNNQ9H307 717 aaKnown RBP9.53□□□□□ -0.88
SPOCK1-205ENST00000508642 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
SPOCK1-205ENST00000508642 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
SPOCK1-205ENST00000508642 RGPD3A6NKT7 1758 aaPredicted RBP9.52□□□□□ -0.88
SPOCK1-205ENST00000508642 RGPD4Q7Z3J3 1758 aa9.52□□□□□ -0.88
SPOCK1-205ENST00000508642 AMOTQ4VCS5 1084 aa9.52□□□□□ -0.89
SPOCK1-205ENST00000508642 PLEKHO1Q53GL0 409 aaPredicted RBP9.52□□□□□ -0.89
SPOCK1-205ENST00000508642 PLEKHF1Q96S99 279 aa9.52□□□□□ -0.89
SPOCK1-205ENST00000508642 PAPPAQ13219 1627 aa9.52□□□□□ -0.89
SPOCK1-205ENST00000508642 PCDH11XQ9BZA7 1347 aa9.52□□□□□ -0.89
SPOCK1-205ENST00000508642 PCDH11YQ9BZA8 1340 aa9.52□□□□□ -0.89
SPOCK1-205ENST00000508642 LY75O60449 1722 aa9.51□□□□□ -0.89
SPOCK1-205ENST00000508642 BCL9O00512 1426 aa9.51□□□□□ -0.89
SPOCK1-205ENST00000508642 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
SPOCK1-205ENST00000508642 KRT27Q7Z3Y8 459 aa9.51□□□□□ -0.89
SPOCK1-205ENST00000508642 KDM3BQ7LBC6 1761 aa9.5□□□□□ -0.89
SPOCK1-205ENST00000508642 UBR2Q8IWV8 1755 aa9.5□□□□□ -0.89
SPOCK1-205ENST00000508642 CYP27B1O15528 508 aa9.5□□□□□ -0.89
SPOCK1-205ENST00000508642 NEFMP07197 916 aa9.5□□□□□ -0.89
SPOCK1-205ENST00000508642 PHACTR3Q96KR7 559 aa9.5□□□□□ -0.89
SPOCK1-205ENST00000508642 MAPK8IP3Q9UPT6 1336 aa9.5□□□□□ -0.89
SPOCK1-205ENST00000508642 TAF1LQ8IZX4 1826 aa9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 MRC1P22897 1456 aa9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 PHKG2P15735 406 aa9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 MTHFSDQ2M296 383 aaKnown RBP9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 IFNL2Q8IZJ0 200 aa9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 MARCH10Q8NA82 808 aaPredicted RBP9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 MAP3K5Q99683 1374 aa9.49□□□□□ -0.89
SPOCK1-205ENST00000508642 ZNF831Q5JPB2 1677 aa9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 NKX1-1Q15270 411 aaPredicted RBP9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 AKAP4Q5JQC9 854 aa9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 C1orf141Q5JVX7 400 aa9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 CCDC146Q8IYE0 955 aa9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 FAM9BQ8IZU0 186 aa9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 GAS2L2Q8NHY3 880 aa9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
SPOCK1-205ENST00000508642 HSP90AB1P08238 724 aaKnown RBP9.47□□□□□ -0.89
SPOCK1-205ENST00000508642 NFE2L2Q16236 605 aa9.47□□□□□ -0.89
SPOCK1-205ENST00000508642 FAM182BQ5T319 152 aa9.47□□□□□ -0.89
SPOCK1-205ENST00000508642 FAM196AQ6ZSG2 479 aa9.47□□□□□ -0.89
SPOCK1-205ENST00000508642 RREB1Q92766 1687 aa9.47□□□□□ -0.89
SPOCK1-205ENST00000508642 CICQ96RK0 1608 aaPredicted RBP9.46□□□□□ -0.89
SPOCK1-205ENST00000508642 COL5A3P25940 1745 aaPredicted RBP9.46□□□□□ -0.89
SPOCK1-205ENST00000508642 GNAT3A8MTJ3 354 aa9.46□□□□□ -0.9
SPOCK1-205ENST00000508642 TMPOP42166 694 aaKnown RBP9.46□□□□□ -0.9
SPOCK1-205ENST00000508642 DCAF5Q96JK2 942 aa9.46□□□□□ -0.9
SPOCK1-205ENST00000508642 C5P01031 1676 aa9.45□□□□□ -0.9
SPOCK1-205ENST00000508642 LAMB4A4D0S4 1761 aa9.45□□□□□ -0.9
SPOCK1-205ENST00000508642 CACNA1FO60840 1977 aa9.45□□□□□ -0.9
SPOCK1-205ENST00000508642 APAF1O14727 1248 aa9.45□□□□□ -0.9
SPOCK1-205ENST00000508642 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
SPOCK1-205ENST00000508642 CEMIPQ8WUJ3 1361 aa9.45□□□□□ -0.9
SPOCK1-205ENST00000508642 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
SPOCK1-205ENST00000508642 RIPK4P57078 832 aa9.44□□□□□ -0.9
SPOCK1-205ENST00000508642 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
SPOCK1-205ENST00000508642 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
SPOCK1-205ENST00000508642 TJP1Q07157 1748 aa9.44□□□□□ -0.9
SPOCK1-205ENST00000508642 NUP188Q5SRE5 1749 aa9.44□□□□□ -0.9
SPOCK1-205ENST00000508642 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
SPOCK1-205ENST00000508642 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
SPOCK1-205ENST00000508642 RTF1Q92541 710 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms