RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
PDGFRA-205ENST00000507536 ARHGEF25Q86VW2 580 aa14.83□□□□□ -0.04
PDGFRA-205ENST00000507536 MYOM1P52179 1685 aa14.83□□□□□ -0.04
PDGFRA-205ENST00000507536 SBNO2Q9Y2G9 1366 aa14.83□□□□□ -0.04
PDGFRA-205ENST00000507536 KAT6BQ8WYB5 2073 aa14.82□□□□□ -0.04
PDGFRA-205ENST00000507536 RGPD2P0DJD1 1756 aa14.82□□□□□ -0.04
PDGFRA-205ENST00000507536 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
PDGFRA-205ENST00000507536 FAM208AQ9UK61 1670 aaKnown RBP14.81□□□□□ -0.04
PDGFRA-205ENST00000507536 IFNL1Q8IU54 200 aa14.81□□□□□ -0.04
PDGFRA-205ENST00000507536 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
PDGFRA-205ENST00000507536 TTC21AQ8NDW8 1320 aa14.81□□□□□ -0.04
PDGFRA-205ENST00000507536 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 ATMINO43313 823 aaPredicted RBP14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 DDB1Q16531 1140 aa14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 ASTLQ6HA08 431 aaPredicted RBP14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 TOM1L2Q6ZVM7 507 aa14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 MARCH10Q8NA82 808 aaPredicted RBP14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 KTN1Q86UP2 1357 aaKnown RBP14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 TNS2Q63HR2 1409 aa14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 GOLGB1Q14789 3259 aaKnown RBP14.8□□□□□ -0.04
PDGFRA-205ENST00000507536 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
PDGFRA-205ENST00000507536 TUBGCP6Q96RT7 1819 aa14.79□□□□□ -0.04
PDGFRA-205ENST00000507536 CIZ1Q9ULV3 898 aaPredicted RBP14.79□□□□□ -0.04
PDGFRA-205ENST00000507536 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
PDGFRA-205ENST00000507536 PLSCR1O15162 318 aa14.78□□□□□ -0.04
PDGFRA-205ENST00000507536 BMP2KQ9NSY1 1161 aaPredicted RBP14.78□□□□□ -0.04
PDGFRA-205ENST00000507536 SOX12O15370 315 aa14.77□□□□□ -0.05
PDGFRA-205ENST00000507536 NEUROD1Q13562 356 aa14.77□□□□□ -0.05
PDGFRA-205ENST00000507536 NBPF14Q5TI25 921 aa14.77□□□□□ -0.05
PDGFRA-205ENST00000507536 KCNH5Q8NCM2 988 aa14.77□□□□□ -0.05
PDGFRA-205ENST00000507536 CARD10Q9BWT7 1032 aa14.77□□□□□ -0.05
PDGFRA-205ENST00000507536 BCL11BQ9C0K0 894 aaPredicted RBP14.77□□□□□ -0.05
PDGFRA-205ENST00000507536 QSER1Q2KHR3 1735 aa14.77□□□□□ -0.05
PDGFRA-205ENST00000507536 COL24A1Q17RW2 1714 aa14.75□□□□□ -0.05
PDGFRA-205ENST00000507536 CCDC7Q96M83 1385 aa14.75□□□□□ -0.05
PDGFRA-205ENST00000507536 CDCA7Q9BWT1 371 aaPredicted RBP14.75□□□□□ -0.05
PDGFRA-205ENST00000507536 PDGFDQ9GZP0 370 aaPredicted RBP14.75□□□□□ -0.05
PDGFRA-205ENST00000507536 KCNQ2O43526 872 aa14.74□□□□□ -0.05
PDGFRA-205ENST00000507536 TIE1P35590 1138 aa14.74□□□□□ -0.05
PDGFRA-205ENST00000507536 ATN1P54259 1190 aaPredicted RBP14.74□□□□□ -0.05
PDGFRA-205ENST00000507536 DOT1LQ8TEK3 1739 aa14.74□□□□□ -0.05
PDGFRA-205ENST00000507536 CHD4Q14839 1912 aa14.74□□□□□ -0.05
PDGFRA-205ENST00000507536 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
PDGFRA-205ENST00000507536 ERBB3P21860 1342 aa14.73□□□□□ -0.05
PDGFRA-205ENST00000507536 LY75O60449 1722 aa14.73□□□□□ -0.05
PDGFRA-205ENST00000507536 NME9Q86XW9 330 aa14.73□□□□□ -0.05
PDGFRA-205ENST00000507536 SPON1Q9HCB6 807 aa14.73□□□□□ -0.05
PDGFRA-205ENST00000507536 EDC4Q6P2E9 1401 aaKnown RBP14.73□□□□□ -0.05
PDGFRA-205ENST00000507536 A0A1W2PP64 1363 aa14.73□□□□□ -0.05
PDGFRA-205ENST00000507536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.05
PDGFRA-205ENST00000507536 PCDHB8Q9UN66 801 aa14.72□□□□□ -0.05
PDGFRA-205ENST00000507536 CSB-PGBD3P0DP91 1061 aa14.71□□□□□ -0.05
PDGFRA-205ENST00000507536 CHRM1P11229 460 aaPredicted RBP14.71□□□□□ -0.05
PDGFRA-205ENST00000507536 TTLL13PA6NNM8 815 aa14.7□□□□□ -0.06
PDGFRA-205ENST00000507536 KIF20BQ96Q89 1820 aa14.7□□□□□ -0.06
PDGFRA-205ENST00000507536 TXNRD1Q16881 649 aa14.69□□□□□ -0.06
PDGFRA-205ENST00000507536 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
PDGFRA-205ENST00000507536 SLC12A5Q9H2X9 1139 aa14.69□□□□□ -0.06
PDGFRA-205ENST00000507536 EXOC5O00471 708 aa14.68□□□□□ -0.06
PDGFRA-205ENST00000507536 PTGER2P43116 358 aa14.68□□□□□ -0.06
PDGFRA-205ENST00000507536 PPP1R1BQ9UD71 204 aaPredicted RBP14.67□□□□□ -0.06
PDGFRA-205ENST00000507536 ZBTB7AO95365 584 aa14.66□□□□□ -0.06
PDGFRA-205ENST00000507536 SLC15A2Q16348 729 aa14.65□□□□□ -0.06
PDGFRA-205ENST00000507536 LHX8Q68G74 356 aa14.65□□□□□ -0.06
PDGFRA-205ENST00000507536 TMC1Q8TDI8 760 aa14.65□□□□□ -0.06
PDGFRA-205ENST00000507536 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
PDGFRA-205ENST00000507536 TESK2Q96S53 571 aa14.65□□□□□ -0.06
PDGFRA-205ENST00000507536 NLRP2Q9NX02 1062 aa14.65□□□□□ -0.06
PDGFRA-205ENST00000507536 TAF1LQ8IZX4 1826 aa14.64□□□□□ -0.07
PDGFRA-205ENST00000507536 IL2RBP14784 551 aa14.64□□□□□ -0.07
PDGFRA-205ENST00000507536 YY1P25490 414 aa14.64□□□□□ -0.07
PDGFRA-205ENST00000507536 ACSBG1Q96GR2 724 aa14.64□□□□□ -0.07
PDGFRA-205ENST00000507536 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
PDGFRA-205ENST00000507536 HDGFL2Q7Z4V5 671 aaPredicted RBP14.63□□□□□ -0.07
PDGFRA-205ENST00000507536 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
PDGFRA-205ENST00000507536 ANKRD26Q9UPS8 1709 aa14.63□□□□□ -0.07
PDGFRA-205ENST00000507536 MEGF6O75095 1541 aa14.62□□□□□ -0.07
PDGFRA-205ENST00000507536 ITGB4P16144 1822 aa14.62□□□□□ -0.07
PDGFRA-205ENST00000507536 TMEM106CQ9BVX2 250 aa14.62□□□□□ -0.07
PDGFRA-205ENST00000507536 STK32BQ9NY57 414 aa14.62□□□□□ -0.07
PDGFRA-205ENST00000507536 METRNQ9UJH8 293 aa14.62□□□□□ -0.07
PDGFRA-205ENST00000507536 TOGARAM1Q9Y4F4 1720 aa14.62□□□□□ -0.07
PDGFRA-205ENST00000507536 C5P01031 1676 aa14.61□□□□□ -0.07
PDGFRA-205ENST00000507536 ZNF827Q17R98 1081 aa14.61□□□□□ -0.07
PDGFRA-205ENST00000507536 ZNF467Q7Z7K2 595 aaPredicted RBP14.61□□□□□ -0.07
PDGFRA-205ENST00000507536 SLC39A7Q92504 469 aa14.61□□□□□ -0.07
PDGFRA-205ENST00000507536 IP6K1Q92551 441 aa14.61□□□□□ -0.07
PDGFRA-205ENST00000507536 LRRC4BQ9NT99 713 aa14.61□□□□□ -0.07
PDGFRA-205ENST00000507536 TERF2IPQ9NYB0 399 aa14.61□□□□□ -0.07
PDGFRA-205ENST00000507536 NSD2O96028 1365 aa14.6□□□□□ -0.07
PDGFRA-205ENST00000507536 PKD1L3Q7Z443 1732 aa14.6□□□□□ -0.07
PDGFRA-205ENST00000507536 MAP3K19Q56UN5 1328 aa14.6□□□□□ -0.07
PDGFRA-205ENST00000507536 ST20-MTHFSA0A0A6YYL1 179 aa14.59□□□□□ -0.07
PDGFRA-205ENST00000507536 FBLN1P23142 703 aa14.59□□□□□ -0.07
PDGFRA-205ENST00000507536 MTFR1LQ9H019 292 aa14.59□□□□□ -0.07
PDGFRA-205ENST00000507536 TRIM35Q9UPQ4 493 aa14.59□□□□□ -0.07
PDGFRA-205ENST00000507536 ANKRD36BQ8N2N9 1353 aa14.59□□□□□ -0.07
PDGFRA-205ENST00000507536 FHDC1Q9C0D6 1143 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms