RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 PNISRQ8TF01 805 aaKnown RBP13.13□□□□□ -0.31
TRIM6-208ENST00000506134 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
TRIM6-208ENST00000506134 FAM208AQ9UK61 1670 aaKnown RBP13.13□□□□□ -0.31
TRIM6-208ENST00000506134 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
TRIM6-208ENST00000506134 A0A0G2JS52 829 aa13.12□□□□□ -0.31
TRIM6-208ENST00000506134 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
TRIM6-208ENST00000506134 MYT1Q01538 1121 aa13.12□□□□□ -0.31
TRIM6-208ENST00000506134 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
TRIM6-208ENST00000506134 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
TRIM6-208ENST00000506134 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
TRIM6-208ENST00000506134 FCHSD2O94868 740 aa13.11□□□□□ -0.31
TRIM6-208ENST00000506134 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
TRIM6-208ENST00000506134 WDR43Q15061 677 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM6-208ENST00000506134 CDCA7Q9BWT1 371 aaPredicted RBP13.11□□□□□ -0.31
TRIM6-208ENST00000506134 KDRP35968 1356 aa13.1□□□□□ -0.31
TRIM6-208ENST00000506134 EXOC5O00471 708 aa13.1□□□□□ -0.31
TRIM6-208ENST00000506134 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
TRIM6-208ENST00000506134 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
TRIM6-208ENST00000506134 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
TRIM6-208ENST00000506134 MEGF6O75095 1541 aa13.09□□□□□ -0.31
TRIM6-208ENST00000506134 SOCS7O14512 581 aa13.09□□□□□ -0.31
TRIM6-208ENST00000506134 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
TRIM6-208ENST00000506134 DDB1Q16531 1140 aa13.08□□□□□ -0.31
TRIM6-208ENST00000506134 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.31
TRIM6-208ENST00000506134 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.31
TRIM6-208ENST00000506134 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.31
TRIM6-208ENST00000506134 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
TRIM6-208ENST00000506134 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
TRIM6-208ENST00000506134 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
TRIM6-208ENST00000506134 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
TRIM6-208ENST00000506134 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
TRIM6-208ENST00000506134 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
TRIM6-208ENST00000506134 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
TRIM6-208ENST00000506134 RGS12O14924 1447 aa13.06□□□□□ -0.32
TRIM6-208ENST00000506134 THSD7AQ9UPZ6 1657 aa13.06□□□□□ -0.32
TRIM6-208ENST00000506134 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
TRIM6-208ENST00000506134 MARCH10Q8NA82 808 aaPredicted RBP13.06□□□□□ -0.32
TRIM6-208ENST00000506134 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
TRIM6-208ENST00000506134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM6-208ENST00000506134 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
TRIM6-208ENST00000506134 CYP27B1O15528 508 aa13.05□□□□□ -0.32
TRIM6-208ENST00000506134 AMOTQ4VCS5 1084 aa13.05□□□□□ -0.32
TRIM6-208ENST00000506134 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
TRIM6-208ENST00000506134 ILDR2Q71H61 639 aa13.04□□□□□ -0.32
TRIM6-208ENST00000506134 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
TRIM6-208ENST00000506134 PARP4Q9UKK3 1724 aaKnown RBP13.04□□□□□ -0.32
TRIM6-208ENST00000506134 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
TRIM6-208ENST00000506134 SENP3-EIF4A1A0A087X0R7 540 aa13.03□□□□□ -0.32
TRIM6-208ENST00000506134 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
TRIM6-208ENST00000506134 LRRC37A3O60309 1634 aa13.02□□□□□ -0.32
TRIM6-208ENST00000506134 NEFMP07197 916 aa13.02□□□□□ -0.33
TRIM6-208ENST00000506134 PHKG2P15735 406 aa13.02□□□□□ -0.33
TRIM6-208ENST00000506134 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.33
TRIM6-208ENST00000506134 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.33
TRIM6-208ENST00000506134 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.33
TRIM6-208ENST00000506134 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
TRIM6-208ENST00000506134 APAF1O14727 1248 aa13.01□□□□□ -0.33
TRIM6-208ENST00000506134 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
TRIM6-208ENST00000506134 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
TRIM6-208ENST00000506134 MAPK8IP3Q9UPT6 1336 aa13.01□□□□□ -0.33
TRIM6-208ENST00000506134 PKD1L3Q7Z443 1732 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 SHANK3Q9BYB0 1731 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
TRIM6-208ENST00000506134 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
TRIM6-208ENST00000506134 NEUROD2Q15784 382 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 NFE2L2Q16236 605 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
TRIM6-208ENST00000506134 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
TRIM6-208ENST00000506134 RIPK4P57078 832 aa12.99□□□□□ -0.33
TRIM6-208ENST00000506134 LGR6Q9HBX8 967 aa12.99□□□□□ -0.33
TRIM6-208ENST00000506134 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
TRIM6-208ENST00000506134 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
TRIM6-208ENST00000506134 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
TRIM6-208ENST00000506134 ACSBG1Q96GR2 724 aa12.97□□□□□ -0.33
TRIM6-208ENST00000506134 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
TRIM6-208ENST00000506134 KCNQ2O43526 872 aa12.96□□□□□ -0.33
TRIM6-208ENST00000506134 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.33
TRIM6-208ENST00000506134 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.33
TRIM6-208ENST00000506134 MCM10Q7L590 875 aa12.96□□□□□ -0.33
TRIM6-208ENST00000506134 PTF1AQ7RTS3 328 aa12.96□□□□□ -0.33
TRIM6-208ENST00000506134 DCAF5Q96JK2 942 aa12.96□□□□□ -0.33
TRIM6-208ENST00000506134 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
TRIM6-208ENST00000506134 MAP3K5Q99683 1374 aa12.96□□□□□ -0.34
TRIM6-208ENST00000506134 KAT6BQ8WYB5 2073 aa12.96□□□□□ -0.34
TRIM6-208ENST00000506134 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
TRIM6-208ENST00000506134 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
TRIM6-208ENST00000506134 HTATSF1O43719 755 aaKnown RBP12.94□□□□□ -0.34
TRIM6-208ENST00000506134 TRIM37O94972 964 aa12.94□□□□□ -0.34
TRIM6-208ENST00000506134 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
TRIM6-208ENST00000506134 SYTL4Q96C24 671 aaPredicted RBP12.94□□□□□ -0.34
TRIM6-208ENST00000506134 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
TRIM6-208ENST00000506134 KDM6AO15550 1401 aaPredicted RBP12.94□□□□□ -0.34
TRIM6-208ENST00000506134 DLG5Q8TDM6 1919 aa12.94□□□□□ -0.34
TRIM6-208ENST00000506134 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
TRIM6-208ENST00000506134 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
TRIM6-208ENST00000506134 BCL9O00512 1426 aa12.93□□□□□ -0.34
TRIM6-208ENST00000506134 CABP4P57796 275 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms